| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yehT [C]
Identifier: 238925993
GI number: 238925993
Start: 3400301
End: 3401035
Strand: Reverse
Name: yehT [C]
Synonym: EUBREC_3651
Alternate gene names: 238925993
Gene position: 3401035-3400301 (Counterclockwise)
Preceding gene: 238925995
Following gene: 238925991
Centisome position: 98.59
GC content: 34.29
Gene sequence:
>735_bases ATGCTGGAAATTGCTGTTTGTGATGACGATATGGCAGATCTTGAGCGTGCAGTGACTATGCTGCATAAGATTTTTACAAG CCAACAGATTGCTTATCATATAGAGCAATTTGTGTCTGCAAATCAAATGCTTGAAAATATCAGCAACATTGATATCGGAA TTTTAGATATTTCGATGGAAGAACTGAATGGTATTAAACTGGGGAGAACATTGAAAGAAAAATTTCCGGATGTGAAATTA GTGTATATTACGAGTTATGAAGAATATTGTATGCAGGTCATTAACGAAGTTCACGCATTTTCATTTCTATGTAAGCCATT GGAATATGATAAATTGGAAACGCAGATGTTGGAACTGCTGGATCAACTGCCGGATACCGGAGCAGAAAAGGATTTTTATA AAGTGACGGACAGCAATGGGAAAGAGTATCTGTCGATTAAATTGAAACTCAGGGACATTTTATATTTTGAATACATAAAA AGATCAAGAAAAGTACTGATAGCGTTGTCTGATATCACATATGAGTATGACTGCATTTTTGAAAAACTGGTTGAGGAACT GCAGCCCTATGATTTTGTTGTGAATTGCAGAGGAAATCTGGTTAATTTAAGGCATATTGAAAAAATAAAGGGTTTTATTA TTTATATGGATAATGGAAAAGAACTCCAGATTGCGCAAAAGAGAAGCAGCGATTTTAGAGAAGAAGTAAATAAATTTTTG CAGAAAAATTCATAG
Upstream 100 bases:
>100_bases TTTAGAGCCTATTTAGATAATATGCAGAGTACTTTATATTTATTTAATGGAAAAATAAAAATTACCGATATAGTAGGAAG ATAGAAAGAAGGTGAGTAAT
Downstream 100 bases:
>100_bases GAGAAACGATGAATACGATTTTACTGATATTATGTAATGCTCTTTCCTGTTTTATCATAAGTACCATACTGTTCCAGTTT ATGAATGGAAAGTATAAAAA
Product: two-component system response regulator protein
Products: NA
Alternate protein names: LytTR Family Two Component Transcriptional Regulator; Two Component Transcriptional Regulator LytTR Family; Response Regulator Receiver Domain Protein; Two-Component System LytT Family Response Regulator; Two-Component System Response Regulator; Response Regulator; Two Component Transcriptional Regulator; Transcriptional Regulator; VirR Protein; Response Regulator VirR; Response Regulator Of LytR/AlgR Family; Two-Component Response Regulator VirR; Two-Component System LytT Family Response Regulator LytT; Two-Component System Response Regulator Protein
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MLEIAVCDDDMADLERAVTMLHKIFTSQQIAYHIEQFVSANQMLENISNIDIGILDISMEELNGIKLGRTLKEKFPDVKL VYITSYEEYCMQVINEVHAFSFLCKPLEYDKLETQMLELLDQLPDTGAEKDFYKVTDSNGKEYLSIKLKLRDILYFEYIK RSRKVLIALSDITYEYDCIFEKLVEELQPYDFVVNCRGNLVNLRHIEKIKGFIIYMDNGKELQIAQKRSSDFREEVNKFL QKNS
Sequences:
>Translated_244_residues MLEIAVCDDDMADLERAVTMLHKIFTSQQIAYHIEQFVSANQMLENISNIDIGILDISMEELNGIKLGRTLKEKFPDVKL VYITSYEEYCMQVINEVHAFSFLCKPLEYDKLETQMLELLDQLPDTGAEKDFYKVTDSNGKEYLSIKLKLRDILYFEYIK RSRKVLIALSDITYEYDCIFEKLVEELQPYDFVVNCRGNLVNLRHIEKIKGFIIYMDNGKELQIAQKRSSDFREEVNKFL QKNS >Mature_244_residues MLEIAVCDDDMADLERAVTMLHKIFTSQQIAYHIEQFVSANQMLENISNIDIGILDISMEELNGIKLGRTLKEKFPDVKL VYITSYEEYCMQVINEVHAFSFLCKPLEYDKLETQMLELLDQLPDTGAEKDFYKVTDSNGKEYLSIKLKLRDILYFEYIK RSRKVLIALSDITYEYDCIFEKLVEELQPYDFVVNCRGNLVNLRHIEKIKGFIIYMDNGKELQIAQKRSSDFREEVNKFL QKNS
Specific function: Unknown
COG id: COG3279
COG function: function code KT; Response regulator of the LytR/AlgR family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28650; Mature: 28650
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEIAVCDDDMADLERAVTMLHKIFTSQQIAYHIEQFVSANQMLENISNIDIGILDISME CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHH ELNGIKLGRTLKEKFPDVKLVYITSYEEYCMQVINEVHAFSFLCKPLEYDKLETQMLELL HHCCCHHCCHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH DQLPDTGAEKDFYKVTDSNGKEYLSIKLKLRDILYFEYIKRSRKVLIALSDITYEYDCIF HHCCCCCCCCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHH EKLVEELQPYDFVVNCRGNLVNLRHIEKIKGFIIYMDNGKELQIAQKRSSDFREEVNKFL HHHHHHCCCCEEEEECCCCEEHHHHHHHHCEEEEEEECCCEEEEHHHHHHHHHHHHHHHH QKNS HCCC >Mature Secondary Structure MLEIAVCDDDMADLERAVTMLHKIFTSQQIAYHIEQFVSANQMLENISNIDIGILDISME CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHH ELNGIKLGRTLKEKFPDVKLVYITSYEEYCMQVINEVHAFSFLCKPLEYDKLETQMLELL HHCCCHHCCHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH DQLPDTGAEKDFYKVTDSNGKEYLSIKLKLRDILYFEYIKRSRKVLIALSDITYEYDCIF HHCCCCCCCCCEEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHH EKLVEELQPYDFVVNCRGNLVNLRHIEKIKGFIIYMDNGKELQIAQKRSSDFREEVNKFL HHHHHHCCCCEEEEECCCCEEHHHHHHHHCEEEEEEECCCEEEEHHHHHHHHHHHHHHHH QKNS HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA