Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is dnaG [C]

Identifier: 238925940

GI number: 238925940

Start: 3366231

End: 3366866

Strand: Reverse

Name: dnaG [C]

Synonym: EUBREC_3598

Alternate gene names: 238925940

Gene position: 3366866-3366231 (Counterclockwise)

Preceding gene: 238925941

Following gene: 238925939

Centisome position: 97.6

GC content: 44.03

Gene sequence:

>636_bases
ATGAATGTATTTGCAGTAGTGAAAGAAAATGTCACTGCAAGGCAGGTGGCTATGCAGTATGGCATCAAAATCAACCGGAG
TGGGCTGGCTTGTTGTCCGTTTCATAAAGACAAGACTCCCAGCATGAAGATTGATAAGAGATACTATTGTTTCGGCTGTG
GAGATACCGGAGATGCGATAGATTTTGTGGCAAAATATTTCGGGCTTGCACCAAAGGAAGCTGCAATGAAGATTGCATCT
GACTTTGGACTGAATTATGACGCAACCAACCGGGCACCACCGAAAAAGATGGCACCAAAGAAAACACCGGAGCAGATACT
GGATGAAGAGCAGAAGCAGTGTTTTTGTGTTCTGTCAGACTATTATCATCTGTTAAGGAAATGGAAAACAGAATATGCAC
CGAAGAGCATGGATGAGGAATGGCATCCCTGCTTTGTAGAAGCTCTGCAGAATATCAGTAAAGTGGAATATCAGCTTGAT
ACTCTCCTTGAAAAGGATATTCCTGACAGAGCTTCTGTTGTTTCTGACATTGGAAAGGGGGTGAAGTCGATTGCAGGAAG
AATTGAAGAGTATCGGAGAAGTCAGGGCGATGCTGGAGAGCACAGAAAAGGGAGAAGTCAGGAAAACAGTCGGTAA

Upstream 100 bases:

>100_bases
CCCTTCTTGAGGCAAACAGGAAGCTTGTAGAGGAGCAGAGAGCAAAGGTGGCAGAAACACCAGCACACAAAAAAGCAAGG
GGAGAGGAATTGGGATAAGC

Downstream 100 bases:

>100_bases
CTATCGTCTGATTTTGATGAATGACCCTAATCTGCAGGGTGCATTCCGTCTGAACATGTTTACGGATAAAATCGACATTA
CAAGGGATTTGGGATGGTAT

Product: DNA primase

Products: NA

Alternate protein names: Zinc Finger CHC2-Family Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAIDFVAKYFGLAPKEAAMKIAS
DFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSDYYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLD
TLLEKDIPDRASVVSDIGKGVKSIAGRIEEYRRSQGDAGEHRKGRSQENSR

Sequences:

>Translated_211_residues
MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAIDFVAKYFGLAPKEAAMKIAS
DFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSDYYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLD
TLLEKDIPDRASVVSDIGKGVKSIAGRIEEYRRSQGDAGEHRKGRSQENSR
>Mature_211_residues
MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAIDFVAKYFGLAPKEAAMKIAS
DFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSDYYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLD
TLLEKDIPDRASVVSDIGKGVKSIAGRIEEYRRSQGDAGEHRKGRSQENSR

Specific function: DNA Primase Is The Polymerase That Synthesizes Small RNA Primers For The Okazaki Fragments On Both Template Strands At Replication Forks During Chromosomal DNA Synthesis. [C]

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.- [C]

Molecular weight: Translated: 23991; Mature: 23991

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAI
CCEEEEHHCCHHHHHHHHHHCCEECCCCCEEECCCCCCCCCCEECCEEEEEECCCCCHHH
DFVAKYFGLAPKEAAMKIASDFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSD
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
YYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLDTLLEKDIPDRASVVSDIGKG
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VKSIAGRIEEYRRSQGDAGEHRKGRSQENSR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAI
CCEEEEHHCCHHHHHHHHHHCCEECCCCCEEECCCCCCCCCCEECCEEEEEECCCCCHHH
DFVAKYFGLAPKEAAMKIASDFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSD
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHH
YYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLDTLLEKDIPDRASVVSDIGKG
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VKSIAGRIEEYRRSQGDAGEHRKGRSQENSR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA