| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is dnaG [C]
Identifier: 238925940
GI number: 238925940
Start: 3366231
End: 3366866
Strand: Reverse
Name: dnaG [C]
Synonym: EUBREC_3598
Alternate gene names: 238925940
Gene position: 3366866-3366231 (Counterclockwise)
Preceding gene: 238925941
Following gene: 238925939
Centisome position: 97.6
GC content: 44.03
Gene sequence:
>636_bases ATGAATGTATTTGCAGTAGTGAAAGAAAATGTCACTGCAAGGCAGGTGGCTATGCAGTATGGCATCAAAATCAACCGGAG TGGGCTGGCTTGTTGTCCGTTTCATAAAGACAAGACTCCCAGCATGAAGATTGATAAGAGATACTATTGTTTCGGCTGTG GAGATACCGGAGATGCGATAGATTTTGTGGCAAAATATTTCGGGCTTGCACCAAAGGAAGCTGCAATGAAGATTGCATCT GACTTTGGACTGAATTATGACGCAACCAACCGGGCACCACCGAAAAAGATGGCACCAAAGAAAACACCGGAGCAGATACT GGATGAAGAGCAGAAGCAGTGTTTTTGTGTTCTGTCAGACTATTATCATCTGTTAAGGAAATGGAAAACAGAATATGCAC CGAAGAGCATGGATGAGGAATGGCATCCCTGCTTTGTAGAAGCTCTGCAGAATATCAGTAAAGTGGAATATCAGCTTGAT ACTCTCCTTGAAAAGGATATTCCTGACAGAGCTTCTGTTGTTTCTGACATTGGAAAGGGGGTGAAGTCGATTGCAGGAAG AATTGAAGAGTATCGGAGAAGTCAGGGCGATGCTGGAGAGCACAGAAAAGGGAGAAGTCAGGAAAACAGTCGGTAA
Upstream 100 bases:
>100_bases CCCTTCTTGAGGCAAACAGGAAGCTTGTAGAGGAGCAGAGAGCAAAGGTGGCAGAAACACCAGCACACAAAAAAGCAAGG GGAGAGGAATTGGGATAAGC
Downstream 100 bases:
>100_bases CTATCGTCTGATTTTGATGAATGACCCTAATCTGCAGGGTGCATTCCGTCTGAACATGTTTACGGATAAAATCGACATTA CAAGGGATTTGGGATGGTAT
Product: DNA primase
Products: NA
Alternate protein names: Zinc Finger CHC2-Family Protein
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAIDFVAKYFGLAPKEAAMKIAS DFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSDYYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLD TLLEKDIPDRASVVSDIGKGVKSIAGRIEEYRRSQGDAGEHRKGRSQENSR
Sequences:
>Translated_211_residues MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAIDFVAKYFGLAPKEAAMKIAS DFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSDYYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLD TLLEKDIPDRASVVSDIGKGVKSIAGRIEEYRRSQGDAGEHRKGRSQENSR >Mature_211_residues MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAIDFVAKYFGLAPKEAAMKIAS DFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSDYYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLD TLLEKDIPDRASVVSDIGKGVKSIAGRIEEYRRSQGDAGEHRKGRSQENSR
Specific function: DNA Primase Is The Polymerase That Synthesizes Small RNA Primers For The Okazaki Fragments On Both Template Strands At Replication Forks During Chromosomal DNA Synthesis. [C]
COG id: COG0358
COG function: function code L; DNA primase (bacterial type)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.- [C]
Molecular weight: Translated: 23991; Mature: 23991
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAI CCEEEEHHCCHHHHHHHHHHCCEECCCCCEEECCCCCCCCCCEECCEEEEEECCCCCHHH DFVAKYFGLAPKEAAMKIASDFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSD HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHH YYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLDTLLEKDIPDRASVVSDIGKG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VKSIAGRIEEYRRSQGDAGEHRKGRSQENSR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNVFAVVKENVTARQVAMQYGIKINRSGLACCPFHKDKTPSMKIDKRYYCFGCGDTGDAI CCEEEEHHCCHHHHHHHHHHCCEECCCCCEEECCCCCCCCCCEECCEEEEEECCCCCHHH DFVAKYFGLAPKEAAMKIASDFGLNYDATNRAPPKKMAPKKTPEQILDEEQKQCFCVLSD HHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHH YYHLLRKWKTEYAPKSMDEEWHPCFVEALQNISKVEYQLDTLLEKDIPDRASVVSDIGKG HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VKSIAGRIEEYRRSQGDAGEHRKGRSQENSR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA