Click here to switch to the map view.

The map label for this gene is 238925935

Identifier: 238925935

GI number: 238925935

Start: 3363041

End: 3363772

Strand: Reverse

Name: 238925935

Synonym: EUBREC_3593

Alternate gene names: NA

Gene position: 3363772-3363041 (Counterclockwise)

Preceding gene: 238925937

Following gene: 238925934

Centisome position: 97.51

GC content: 42.9

Gene sequence:

>732_bases
ATGTCTTACGATGAAATGGAACTGGATAAGATCGGAGACAGGAAAACAGCCTTGTTTCTGATTATGTCCGATACGGATAC
CACATTCAACTTTGTGATTGCGATGCTGCAGTCACAGCTTTTCAATCTGCTTTGCGACAAGGCAGATGATGAATATGGCG
GCAGACTTCCGGTGCATGTGCGTGTCATCGCTGATGAGTTTGCCAACATCGGACAAATTCCTCAGTTTGACAAGCTGATC
GCAACCATCCGAAGCAGGGAAATCTCTGCTTCTATTATTTTGCAGTCACAGAGCCAGTTAAAGGCAATGTATAAGGATAG
TGCAGATACCATTCTGGGCAACTGTGATACGACTTTATTCCTTGGTGGGAAAGAGAAGACCACATTAAAGGAAATGAGTG
AGCTTCTGGGTAAGGAAACCATTGACCTGTATAACACTTCGGAGACAAGAAGCAATCAGAAATCTTTTGGACTGAATTAT
CAGAAACTGGGGAAACAGTTGATGACAGAGGACGAGATTGCAGTCATGGATGGAGGAAAATGTATCCTGCAGATCCGTGG
TGCCAGACCATTTTTCTCAGACAAATATGATATTACGAAACACAAAAACTATCGGCTTCTTGCAGATGAAAACGAGAAGA
ACCGATACAAGGTTGAGAAAGAGTTAAATCCGCAGTACACACCGAAATCTGAAGAAGAGGTGGAAGTAATTCAAGTAGAT
CTGTCGGAGTAA

Upstream 100 bases:

>100_bases
AAGTCTTTGACATTTTGTTTCAGGCAAAACGGCGAAGTCGATTTTGATTTCCTGTGGTGCCAGACTTGCCCCATTTGATA
TCGCAGAGCTTCGTGAGATC

Downstream 100 bases:

>100_bases
CCTTGGGAATGAACGAAAAATAATAAGGAAAGGAATAACTGACATTAGGTGCGCCGGCTTTTTAGTCGGTGTTTTTTCAT
TCCCGTAAACACCTGAAAAA

Product: TraG protein

Products: NA

Alternate protein names: TraG Family Protein; TraG/TraD Family Protein; TraG Protein; ATPase Involved In Conjugal Plasmid Transfer; Trag Family Protein; Conjugal Transfer Protein TraD; Conjugation Protein; Conjugal Transfer Protein; Type IV Secretory Pathway VirD4 Component; Trag/Trad Family Protein; ORF Tau; Conjugal Transfer Protein TraG; Conjugal Plasmid Transfer ATPase; Plasmid Transfer Factor TraK; Protein TrsK; TraG/TraD Family; Type IV Secretion System; Type IV Secretory Pathway VirD4 Components; Type IV Secretory Pathway VirD4 Protein-Like Protein; TRAG Protein

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSYDEMELDKIGDRKTALFLIMSDTDTTFNFVIAMLQSQLFNLLCDKADDEYGGRLPVHVRVIADEFANIGQIPQFDKLI
ATIRSREISASIILQSQSQLKAMYKDSADTILGNCDTTLFLGGKEKTTLKEMSELLGKETIDLYNTSETRSNQKSFGLNY
QKLGKQLMTEDEIAVMDGGKCILQIRGARPFFSDKYDITKHKNYRLLADENEKNRYKVEKELNPQYTPKSEEEVEVIQVD
LSE

Sequences:

>Translated_243_residues
MSYDEMELDKIGDRKTALFLIMSDTDTTFNFVIAMLQSQLFNLLCDKADDEYGGRLPVHVRVIADEFANIGQIPQFDKLI
ATIRSREISASIILQSQSQLKAMYKDSADTILGNCDTTLFLGGKEKTTLKEMSELLGKETIDLYNTSETRSNQKSFGLNY
QKLGKQLMTEDEIAVMDGGKCILQIRGARPFFSDKYDITKHKNYRLLADENEKNRYKVEKELNPQYTPKSEEEVEVIQVD
LSE
>Mature_242_residues
SYDEMELDKIGDRKTALFLIMSDTDTTFNFVIAMLQSQLFNLLCDKADDEYGGRLPVHVRVIADEFANIGQIPQFDKLIA
TIRSREISASIILQSQSQLKAMYKDSADTILGNCDTTLFLGGKEKTTLKEMSELLGKETIDLYNTSETRSNQKSFGLNYQ
KLGKQLMTEDEIAVMDGGKCILQIRGARPFFSDKYDITKHKNYRLLADENEKNRYKVEKELNPQYTPKSEEEVEVIQVDL
SE

Specific function: Unknown

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27742; Mature: 27611

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYDEMELDKIGDRKTALFLIMSDTDTTFNFVIAMLQSQLFNLLCDKADDEYGGRLPVHV
CCCCCCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
RVIADEFANIGQIPQFDKLIATIRSREISASIILQSQSQLKAMYKDSADTILGNCDTTLF
EEEEHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCEECCCCEEEE
LGGKEKTTLKEMSELLGKETIDLYNTSETRSNQKSFGLNYQKLGKQLMTEDEIAVMDGGK
ECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCCHHHHHHHHCCCCCEEEEECCE
CILQIRGARPFFSDKYDITKHKNYRLLADENEKNRYKVEKELNPQYTPKSEEEVEVIQVD
EEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
LSE
ECC
>Mature Secondary Structure 
SYDEMELDKIGDRKTALFLIMSDTDTTFNFVIAMLQSQLFNLLCDKADDEYGGRLPVHV
CCCCCHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
RVIADEFANIGQIPQFDKLIATIRSREISASIILQSQSQLKAMYKDSADTILGNCDTTLF
EEEEHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCEECCCCEEEE
LGGKEKTTLKEMSELLGKETIDLYNTSETRSNQKSFGLNYQKLGKQLMTEDEIAVMDGGK
ECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCHHCCCCHHHHHHHHCCCCCEEEEECCE
CILQIRGARPFFSDKYDITKHKNYRLLADENEKNRYKVEKELNPQYTPKSEEEVEVIQVD
EEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
LSE
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA