Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is 238925928

Identifier: 238925928

GI number: 238925928

Start: 3359629

End: 3360285

Strand: Direct

Name: 238925928

Synonym: EUBREC_3586

Alternate gene names: NA

Gene position: 3359629-3360285 (Clockwise)

Preceding gene: 238925927

Following gene: 238925929

Centisome position: 97.39

GC content: 49.01

Gene sequence:

>657_bases
ATGAGCGCAAAAAAAGCAGCAAATCTTTTTCGGATTTACTGCTTCATGTGCCGCTGCGGGGCGGCGGGATATTCAGTTTC
TATGTTATCGGTCAAGCCGGAACTTGAACAGGCTTTCAATCAGCTTTGTTCTGATGTAGTCCTCCATATCAGAGTTGTAA
TAGCCGTTCATCTTAGAGAAGTAGCGGATATATCCAGCGTATCGGTCAAGGACGGCTTGTATCGCTATGGGGTCGCCCTC
ATGTGCCTTTATGATAGTGTCATAGGGGAGAAGTCGGTTACTCATGGGACAGCACCTCCATTTCCTCTTTTAGCCGCTTC
AAGGCAAGCCGTATATGCCGCCCGATTGTGCTGCGTGTCCAGCCGCTTTGTTCTCCGATTTCTTTCTGCGTCAAGTGCTG
AAAGTAGTACAAAAAGATTTCTTCCTGCGTCTGTTCCGGCAATCGGGCAAGAGCAGCCGCAAGAGAACAGCTATCTAAAA
GTATCGTCTGCCCCCGGACAGAGAACGGATAAGTTTCGCCATAGTCCGGCACTTGAAAATACTCGTCTGTGGTGCTTAGT
TGGACAAACTTTTCTTCGGTCAGATATTCAAGGGAGATTTCCCGTTTCCATCTCGCCGCCAGCATACGGGCAGCGTCAAA
GGACGCATGGCGAATAA

Upstream 100 bases:

>100_bases
TAAGGCGTTTCGGAAGCTGCGTTTTGCCCGCTGTCTAAAAAAACGGCAGCCTTTTTTTGGTTTCACTATCTAATACGGAA
CTTTTGGAAATTTGCCAAAA

Downstream 100 bases:

>100_bases
CAATCCGGCAATAGGTATCATGGGTATAGCGGATATGTTCTTGATAGGCTTCGTATTCAGTCATGGAAAATCCCCCTTTC
TTCGATTATGGGAAAGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSAKKAANLFRIYCFMCRCGAAGYSVSMLSVKPELEQAFNQLCSDVVLHIRVVIAVHLREVADISSVSVKDGLYRYGVAL
MCLYDSVIGEKSVTHGTAPPFPLLAASRQAVYAARLCCVSSRFVLRFLSASSAESSTKRFLPASVPAIGQEQPQENSYLK
VSSAPGQRTDKFRHSPALENTRLWCLVGQTFLRSDIQGRFPVSISPPAYGQRQRTHGE

Sequences:

>Translated_218_residues
MSAKKAANLFRIYCFMCRCGAAGYSVSMLSVKPELEQAFNQLCSDVVLHIRVVIAVHLREVADISSVSVKDGLYRYGVAL
MCLYDSVIGEKSVTHGTAPPFPLLAASRQAVYAARLCCVSSRFVLRFLSASSAESSTKRFLPASVPAIGQEQPQENSYLK
VSSAPGQRTDKFRHSPALENTRLWCLVGQTFLRSDIQGRFPVSISPPAYGQRQRTHGE
>Mature_217_residues
SAKKAANLFRIYCFMCRCGAAGYSVSMLSVKPELEQAFNQLCSDVVLHIRVVIAVHLREVADISSVSVKDGLYRYGVALM
CLYDSVIGEKSVTHGTAPPFPLLAASRQAVYAARLCCVSSRFVLRFLSASSAESSTKRFLPASVPAIGQEQPQENSYLKV
SSAPGQRTDKFRHSPALENTRLWCLVGQTFLRSDIQGRFPVSISPPAYGQRQRTHGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23953; Mature: 23822

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKKAANLFRIYCFMCRCGAAGYSVSMLSVKPELEQAFNQLCSDVVLHIRVVIAVHLRE
CCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VADISSVSVKDGLYRYGVALMCLYDSVIGEKSVTHGTAPPFPLLAASRQAVYAARLCCVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SRFVLRFLSASSAESSTKRFLPASVPAIGQEQPQENSYLKVSSAPGQRTDKFRHSPALEN
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCC
TRLWCLVGQTFLRSDIQGRFPVSISPPAYGQRQRTHGE
CEEEEEECHHHHHHCCCCCCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
SAKKAANLFRIYCFMCRCGAAGYSVSMLSVKPELEQAFNQLCSDVVLHIRVVIAVHLRE
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VADISSVSVKDGLYRYGVALMCLYDSVIGEKSVTHGTAPPFPLLAASRQAVYAARLCCVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
SRFVLRFLSASSAESSTKRFLPASVPAIGQEQPQENSYLKVSSAPGQRTDKFRHSPALEN
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCC
TRLWCLVGQTFLRSDIQGRFPVSISPPAYGQRQRTHGE
CEEEEEECHHHHHHCCCCCCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA