| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925905
Identifier: 238925905
GI number: 238925905
Start: 3323853
End: 3326609
Strand: Reverse
Name: 238925905
Synonym: EUBREC_3563
Alternate gene names: NA
Gene position: 3326609-3323853 (Counterclockwise)
Preceding gene: 238925906
Following gene: 238925904
Centisome position: 96.43
GC content: 41.24
Gene sequence:
>2757_bases ATGGCAAGAAACAGGATAACGGGTAGAGAAACACAGAAAATGCAGGAATACACGCAGGGACAGATCAGTCAGGCAGAGCG TAGAGGCATAGAATTTCCAACAAATGTAAAAGAACAGCTTTTTGAATATGCGAATCTGATCGGTGAGGAAGAGAAAGTTA GGACTCTGGTAAGAAATCTAGCAGATGCAGTGATCCAGGCAGATGAAGAAGGGGTAGAGGATCTACTGGATGATGCAAGA ATGGATATTCAGGATCTACCAGATCCAACCATAGGTAAGCTGGAATTACGTGATTATGGATATACAGCAGAAGACATGGT GCCGCTTAGAAAAGAAGCAGCTTTGGATTATCACAGAATGGGTTCTAAGATTTATTGCCTGGGCAGCGATGGCAGCAAGG GAGAGTATGCAAGTAAAGAAATGATACAGGCGCATGAAGGTCTGTTTGGCATGGAATCGCAGATGTGGGAACGGATAGAG GAGAATGACCTGGATTATGCCGATGAAGATTTTGGAGCATTTCAGGAGCCTATGAGTGTCATTGAGCAGGAAGAAGCACT GAAATTATACGATGCCGGAGCAGATATCTATCTGATCACTAATTTTTCATCACCAATGTATGTCACGGAACGCATGGAAA TTGAACGAGGACCGGAGCATTATCAGATGTCTATGACAGAACTGGAGCGTTTCCGTAACCTGGAATGGGAAATGCAGAAA TATCCGCAGATTCAGTCTTTGAAAGAGGCAAACCTGTTGTTAGGAACAAGGCGAACCTTTGGTATTTATCAGATCAAGGA CGATTCACCGGGCGAAAACTATGCATTTATGAATATGCGCTTTATTGAAAGTCATGGTATGCAGATAAAAAAAGAAGATT ATAAGCTGGTCTATGTTGGGGAATTATCGGGAAATATGTCACTGGATGATATTTTTGAAAGGTTCAACATTGATAGACCG GAAGATTTCCGTGGGCATTCCCTGTCTGTCAGTGATATCATAGTTCTGAATGACGGGGAAAAAGTAACCGCTCATTTTGT AGACAGTATCAGTTTTGAACAGCTGGATTCTTTCCTGAATCTGGAAGAACAGGTTCTTAGTGAACTGGCATATGAGGTAG GAGAACGTTACTTTGCTATTCAGAGAACAGAAGAAGGATATGATTATTCGTTTTACGATGAAGATTTTCGTCTGATGGAT GGTGGCGTCTATGAAAATGATCAAATTTCTATTGAAGAAGCGGCAGAGGAACTTCTGGAAGACGAAGGCTGGACTGGAGA ACGCATCCGTGGAGATTATGATCAGTTGATGGAAAAAGTAGAAGAAATGGATGAAGTTGTAATGGCAGAGATTCAGAAAA GCCAGGGCGAATATAAGCCTTTGGCAAAGGTGGAGGAACTGGAAGAGGCGAATTATAACATGATTGATAACGTCCTTAAT AATATGCCACCGAAGAAAGAGCCTTATCTGGAATATTTCGCCACAGAATGTGATGAGTTCCATGATATGGGAGCTTATGA AAAAAGTACCGATGTTAATCAGATTGCTGCGGTCTATGAAAAATATAGGGAGAATCCTAAAACTGCGTATCTGGGATGCT CAATGGGAATTATTTATCGTGATCCGGAAGACAGTTACTATGATGAAGCCGAATTTGCGATCGTTAAAGGGAATACCGTA TTCGGAAATCTGATGGATGATGTTCGATTTTATGGAGAACTTGCACTGGTACGGGAAGGGATCGAGAAAATTCATGAAGC ATTGCCGGACTACAAGTATGTACCGATGAGGGATGTTCGAGAAGCAATGTATCCTGAGAAAATGACCACAGAACAGCTGG CAGAGGCACTGGATGAGATTGCAGAAGCTTTTGATCCGTATGAGTATCGAGATAATGTGGAGAGGGGAGAAAATACGGTG CAGGAAGTAATGCTGGATTTGAGAAGTGGAAATATTCATTCCTATATTTCATATCTGAAGGATATTGTAGACGAAGAATG CGATCTGTCTGTTCGTGCAGGAGTATTGATTGAAAGACTGAAAGCCTATGAACCTGAACTTCCAAAGGATATGGAACCAA TGGTGTATGTAAACTATTGTGAAGAAAGTGATCTCATGAATCCAAGATGTCAGAAGCTGTCTGAGCTGGATGCAAAAACA GCAGAAATGGATAAAGAATGGTATGCAAAACGTGATCCGAAGACAGAGGAACCTACAAAAATTGCAAAGATATATGTGAC TGTATATTATGCGGAAAAAGGTGAACAGATGCTGCATCATTTTAAGAAGTCAATGGATATTGGAAATGGACATGGCGGTA TTGTGAGTCAGTTGAAGTATGATAATGAAATGAAGCTTACAGATGAGTATTGGATCAATTACCAGAAAGGCAAAGGAAGT GAAGAGTTCCAAAAGTATATGGAAGATCTGACAGACATGCAGAATCATGTGCTTCCGTATCTGCAGAGTTTTTGCAATCT GGAGGAAAAAGGTGTGAAGGAGAGACGAGAACAGCAGATAGCAGAAAGATATGAAGGAAGAGCAGATGAGAGGGTAACAA GTACCGAAGCGAATGAAGTTGTTAAGGATGTAGGAAAAACAGATAGAAAACCGGCACAGCAGAAGCAGGCGGTAGATGGA AAAGATAAGAAATTATCCATTCATGAACGGCTTGAGATCAATAAGAGGATTATTCAAGAAAAGCAGGGAAAAGATAAAAC GGAGAGAGGAGTTGATTTGGGTGTAAGGACAGTGTAG
Upstream 100 bases:
>100_bases AAACGGGACTTCGGTCTGGAATAAAGAGGAAAGATGGCATAATTTGGTAGAAGAAGGTTCTGTCGGTTATGCCATTTTTT AGAACACAGGAGGAATTTAT
Downstream 100 bases:
>100_bases AATAAGCAGAACGAGTCGGAGGTCATGGATGATAACGTGGCTTCCGGCTTTATTGCGTATTGTCGGAAGAATTATAAATG GTATAATGAATGTAAATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 918; Mature: 917
Protein sequence:
>918_residues MARNRITGRETQKMQEYTQGQISQAERRGIEFPTNVKEQLFEYANLIGEEEKVRTLVRNLADAVIQADEEGVEDLLDDAR MDIQDLPDPTIGKLELRDYGYTAEDMVPLRKEAALDYHRMGSKIYCLGSDGSKGEYASKEMIQAHEGLFGMESQMWERIE ENDLDYADEDFGAFQEPMSVIEQEEALKLYDAGADIYLITNFSSPMYVTERMEIERGPEHYQMSMTELERFRNLEWEMQK YPQIQSLKEANLLLGTRRTFGIYQIKDDSPGENYAFMNMRFIESHGMQIKKEDYKLVYVGELSGNMSLDDIFERFNIDRP EDFRGHSLSVSDIIVLNDGEKVTAHFVDSISFEQLDSFLNLEEQVLSELAYEVGERYFAIQRTEEGYDYSFYDEDFRLMD GGVYENDQISIEEAAEELLEDEGWTGERIRGDYDQLMEKVEEMDEVVMAEIQKSQGEYKPLAKVEELEEANYNMIDNVLN NMPPKKEPYLEYFATECDEFHDMGAYEKSTDVNQIAAVYEKYRENPKTAYLGCSMGIIYRDPEDSYYDEAEFAIVKGNTV FGNLMDDVRFYGELALVREGIEKIHEALPDYKYVPMRDVREAMYPEKMTTEQLAEALDEIAEAFDPYEYRDNVERGENTV QEVMLDLRSGNIHSYISYLKDIVDEECDLSVRAGVLIERLKAYEPELPKDMEPMVYVNYCEESDLMNPRCQKLSELDAKT AEMDKEWYAKRDPKTEEPTKIAKIYVTVYYAEKGEQMLHHFKKSMDIGNGHGGIVSQLKYDNEMKLTDEYWINYQKGKGS EEFQKYMEDLTDMQNHVLPYLQSFCNLEEKGVKERREQQIAERYEGRADERVTSTEANEVVKDVGKTDRKPAQQKQAVDG KDKKLSIHERLEINKRIIQEKQGKDKTERGVDLGVRTV
Sequences:
>Translated_918_residues MARNRITGRETQKMQEYTQGQISQAERRGIEFPTNVKEQLFEYANLIGEEEKVRTLVRNLADAVIQADEEGVEDLLDDAR MDIQDLPDPTIGKLELRDYGYTAEDMVPLRKEAALDYHRMGSKIYCLGSDGSKGEYASKEMIQAHEGLFGMESQMWERIE ENDLDYADEDFGAFQEPMSVIEQEEALKLYDAGADIYLITNFSSPMYVTERMEIERGPEHYQMSMTELERFRNLEWEMQK YPQIQSLKEANLLLGTRRTFGIYQIKDDSPGENYAFMNMRFIESHGMQIKKEDYKLVYVGELSGNMSLDDIFERFNIDRP EDFRGHSLSVSDIIVLNDGEKVTAHFVDSISFEQLDSFLNLEEQVLSELAYEVGERYFAIQRTEEGYDYSFYDEDFRLMD GGVYENDQISIEEAAEELLEDEGWTGERIRGDYDQLMEKVEEMDEVVMAEIQKSQGEYKPLAKVEELEEANYNMIDNVLN NMPPKKEPYLEYFATECDEFHDMGAYEKSTDVNQIAAVYEKYRENPKTAYLGCSMGIIYRDPEDSYYDEAEFAIVKGNTV FGNLMDDVRFYGELALVREGIEKIHEALPDYKYVPMRDVREAMYPEKMTTEQLAEALDEIAEAFDPYEYRDNVERGENTV QEVMLDLRSGNIHSYISYLKDIVDEECDLSVRAGVLIERLKAYEPELPKDMEPMVYVNYCEESDLMNPRCQKLSELDAKT AEMDKEWYAKRDPKTEEPTKIAKIYVTVYYAEKGEQMLHHFKKSMDIGNGHGGIVSQLKYDNEMKLTDEYWINYQKGKGS EEFQKYMEDLTDMQNHVLPYLQSFCNLEEKGVKERREQQIAERYEGRADERVTSTEANEVVKDVGKTDRKPAQQKQAVDG KDKKLSIHERLEINKRIIQEKQGKDKTERGVDLGVRTV >Mature_917_residues ARNRITGRETQKMQEYTQGQISQAERRGIEFPTNVKEQLFEYANLIGEEEKVRTLVRNLADAVIQADEEGVEDLLDDARM DIQDLPDPTIGKLELRDYGYTAEDMVPLRKEAALDYHRMGSKIYCLGSDGSKGEYASKEMIQAHEGLFGMESQMWERIEE NDLDYADEDFGAFQEPMSVIEQEEALKLYDAGADIYLITNFSSPMYVTERMEIERGPEHYQMSMTELERFRNLEWEMQKY PQIQSLKEANLLLGTRRTFGIYQIKDDSPGENYAFMNMRFIESHGMQIKKEDYKLVYVGELSGNMSLDDIFERFNIDRPE DFRGHSLSVSDIIVLNDGEKVTAHFVDSISFEQLDSFLNLEEQVLSELAYEVGERYFAIQRTEEGYDYSFYDEDFRLMDG GVYENDQISIEEAAEELLEDEGWTGERIRGDYDQLMEKVEEMDEVVMAEIQKSQGEYKPLAKVEELEEANYNMIDNVLNN MPPKKEPYLEYFATECDEFHDMGAYEKSTDVNQIAAVYEKYRENPKTAYLGCSMGIIYRDPEDSYYDEAEFAIVKGNTVF GNLMDDVRFYGELALVREGIEKIHEALPDYKYVPMRDVREAMYPEKMTTEQLAEALDEIAEAFDPYEYRDNVERGENTVQ EVMLDLRSGNIHSYISYLKDIVDEECDLSVRAGVLIERLKAYEPELPKDMEPMVYVNYCEESDLMNPRCQKLSELDAKTA EMDKEWYAKRDPKTEEPTKIAKIYVTVYYAEKGEQMLHHFKKSMDIGNGHGGIVSQLKYDNEMKLTDEYWINYQKGKGSE EFQKYMEDLTDMQNHVLPYLQSFCNLEEKGVKERREQQIAERYEGRADERVTSTEANEVVKDVGKTDRKPAQQKQAVDGK DKKLSIHERLEINKRIIQEKQGKDKTERGVDLGVRTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106910; Mature: 106778
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNRITGRETQKMQEYTQGQISQAERRGIEFPTNVKEQLFEYANLIGEEEKVRTLVRNL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH ADAVIQADEEGVEDLLDDARMDIQDLPDPTIGKLELRDYGYTAEDMVPLRKEAALDYHRM HHHHHHCCHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHC GSKIYCLGSDGSKGEYASKEMIQAHEGLFGMESQMWERIEENDLDYADEDFGAFQEPMSV CCEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH IEQEEALKLYDAGADIYLITNFSSPMYVTERMEIERGPEHYQMSMTELERFRNLEWEMQK HHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH YPQIQSLKEANLLLGTRRTFGIYQIKDDSPGENYAFMNMRFIESHGMQIKKEDYKLVYVG CCHHHHHHHHHHHEECCCCCEEEEECCCCCCCCEEEEEEEEHHHCCCEEECCCEEEEEEE ELSGNMSLDDIFERFNIDRPEDFRGHSLSVSDIIVLNDGEKVTAHFVDSISFEQLDSFLN ECCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHHCCCHHHHHHHHC LEEQVLSELAYEVGERYFAIQRTEEGYDYSFYDEDFRLMDGGVYENDQISIEEAAEELLE HHHHHHHHHHHHHHHHEEEEEECCCCCCCCEECCCHHEECCCCCCCCCCCHHHHHHHHHH DEGWTGERIRGDYDQLMEKVEEMDEVVMAEIQKSQGEYKPLAKVEELEEANYNMIDNVLN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH NMPPKKEPYLEYFATECDEFHDMGAYEKSTDVNQIAAVYEKYRENPKTAYLGCSMGIIYR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEE DPEDSYYDEAEFAIVKGNTVFGNLMDDVRFYGELALVREGIEKIHEALPDYKYVPMRDVR CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH EAMYPEKMTTEQLAEALDEIAEAFDPYEYRDNVERGENTVQEVMLDLRSGNIHSYISYLK HHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DIVDEECDLSVRAGVLIERLKAYEPELPKDMEPMVYVNYCEESDLMNPRCQKLSELDAKT HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH AEMDKEWYAKRDPKTEEPTKIAKIYVTVYYAEKGEQMLHHFKKSMDIGNGHGGIVSQLKY HHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHCC DNEMKLTDEYWINYQKGKGSEEFQKYMEDLTDMQNHVLPYLQSFCNLEEKGVKERREQQI CCCCEECHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AERYEGRADERVTSTEANEVVKDVGKTDRKPAQQKQAVDGKDKKLSIHERLEINKRIIQE HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHH KQGKDKTERGVDLGVRTV HCCCCHHHHCCCCCCCCC >Mature Secondary Structure ARNRITGRETQKMQEYTQGQISQAERRGIEFPTNVKEQLFEYANLIGEEEKVRTLVRNL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH ADAVIQADEEGVEDLLDDARMDIQDLPDPTIGKLELRDYGYTAEDMVPLRKEAALDYHRM HHHHHHCCHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHC GSKIYCLGSDGSKGEYASKEMIQAHEGLFGMESQMWERIEENDLDYADEDFGAFQEPMSV CCEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH IEQEEALKLYDAGADIYLITNFSSPMYVTERMEIERGPEHYQMSMTELERFRNLEWEMQK HHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHH YPQIQSLKEANLLLGTRRTFGIYQIKDDSPGENYAFMNMRFIESHGMQIKKEDYKLVYVG CCHHHHHHHHHHHEECCCCCEEEEECCCCCCCCEEEEEEEEHHHCCCEEECCCEEEEEEE ELSGNMSLDDIFERFNIDRPEDFRGHSLSVSDIIVLNDGEKVTAHFVDSISFEQLDSFLN ECCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHHCCCHHHHHHHHC LEEQVLSELAYEVGERYFAIQRTEEGYDYSFYDEDFRLMDGGVYENDQISIEEAAEELLE HHHHHHHHHHHHHHHHEEEEEECCCCCCCCEECCCHHEECCCCCCCCCCCHHHHHHHHHH DEGWTGERIRGDYDQLMEKVEEMDEVVMAEIQKSQGEYKPLAKVEELEEANYNMIDNVLN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH NMPPKKEPYLEYFATECDEFHDMGAYEKSTDVNQIAAVYEKYRENPKTAYLGCSMGIIYR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEE DPEDSYYDEAEFAIVKGNTVFGNLMDDVRFYGELALVREGIEKIHEALPDYKYVPMRDVR CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH EAMYPEKMTTEQLAEALDEIAEAFDPYEYRDNVERGENTVQEVMLDLRSGNIHSYISYLK HHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH DIVDEECDLSVRAGVLIERLKAYEPELPKDMEPMVYVNYCEESDLMNPRCQKLSELDAKT HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH AEMDKEWYAKRDPKTEEPTKIAKIYVTVYYAEKGEQMLHHFKKSMDIGNGHGGIVSQLKY HHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHHHCC DNEMKLTDEYWINYQKGKGSEEFQKYMEDLTDMQNHVLPYLQSFCNLEEKGVKERREQQI CCCCEECHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH AERYEGRADERVTSTEANEVVKDVGKTDRKPAQQKQAVDGKDKKLSIHERLEINKRIIQE HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHH KQGKDKTERGVDLGVRTV HCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA