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The map label for this gene is yurN [H]

Identifier: 238925861

GI number: 238925861

Start: 3290091

End: 3290948

Strand: Reverse

Name: yurN [H]

Synonym: EUBREC_3519

Alternate gene names: 238925861

Gene position: 3290948-3290091 (Counterclockwise)

Preceding gene: 238925862

Following gene: 238925860

Centisome position: 95.4

GC content: 40.79

Gene sequence:

>858_bases
ATGAAATGGATTCCATGGATTTTAATTCTTCCGGTTGTGATTATCCGTGGTTTTACTACTTTATATCCGATTATAGTAAC
TTTGAAAAATAGTTTATTTGACGTAAAGGTTTTATCAGGAGTCAACAAATTTGTCGGACTGGCAAACTACGTTAATGTGT
TTAAAGATCCCAAAGTGCAGACATCCATATCCTTTACCGTGGAATTTGTGGTTGTTTCCATGGTATTCCATGTGGTTTTA
GGTGTGATCCTGGCTTTGATCCTGAATATGAAATTTAAGGGCAGAAGATTCTTAAGAACCATCGTACTGATCCCGTGGGC
TATGCCGGCTGTTGTTATCGGTATGGCAGCAAAATGGGGATTCAACAACGATTACGGTCTGGTGAACGATTTTATAAGAC
GGTTTGTACCAAATTTTCAGTATGACTGGATGATCAACACCGGTTCCGCCAGAGCAGCGGTTATCGCCATGGACCTGTGG
AAAGACCTTCCGTTCTTTGCAATCCTGGTATTGTCAGGACTTCAGTTTATTTCCGGTGATATCTACGAAGCTGCAAAGGT
GGATGGGGCAAACGGAGTGCAGAGCTTTTTCCGTATCACATTACCGTTGATCCTGAAAAATATTATCACTTTATGTATTC
CGTTTACACTTTGGAGACTGACAACTTTCGACTTGGTATATGCTATGACTTCCGGTGGTCCTGGTGAGGATACATCCCTG
ATCGCATATAGAATTACCACAGAAGCATTTACCAATCTAAATGTGGGGTATGCATCTACACTGGCAGTTATGTTGTTCAT
TGTAATGGCGGTCTTTAGCTTTATCAACATCAAATTCATGAGTAAACTGGCAGATTAG

Upstream 100 bases:

>100_bases
GAAAAAATCTGCTTGGTAAAAGGGAACGCATCATAGCAATTTATGGTGCGTTTTCCTAAGATGACAGGAGGAGAAAAGAG
TGACAATCAGTAAAAAATCG

Downstream 100 bases:

>100_bases
GAGGTATTGACATGCAGGATACTAATAAATATAAAGTATATAAAGCCATTACTGCAGTAGGCAAATGGCTGTTATTTGCA
ATCGTTTCCTTTTTGATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKWIPWILILPVVIIRGFTTLYPIIVTLKNSLFDVKVLSGVNKFVGLANYVNVFKDPKVQTSISFTVEFVVVSMVFHVVL
GVILALILNMKFKGRRFLRTIVLIPWAMPAVVIGMAAKWGFNNDYGLVNDFIRRFVPNFQYDWMINTGSARAAVIAMDLW
KDLPFFAILVLSGLQFISGDIYEAAKVDGANGVQSFFRITLPLILKNIITLCIPFTLWRLTTFDLVYAMTSGGPGEDTSL
IAYRITTEAFTNLNVGYASTLAVMLFIVMAVFSFINIKFMSKLAD

Sequences:

>Translated_285_residues
MKWIPWILILPVVIIRGFTTLYPIIVTLKNSLFDVKVLSGVNKFVGLANYVNVFKDPKVQTSISFTVEFVVVSMVFHVVL
GVILALILNMKFKGRRFLRTIVLIPWAMPAVVIGMAAKWGFNNDYGLVNDFIRRFVPNFQYDWMINTGSARAAVIAMDLW
KDLPFFAILVLSGLQFISGDIYEAAKVDGANGVQSFFRITLPLILKNIITLCIPFTLWRLTTFDLVYAMTSGGPGEDTSL
IAYRITTEAFTNLNVGYASTLAVMLFIVMAVFSFINIKFMSKLAD
>Mature_285_residues
MKWIPWILILPVVIIRGFTTLYPIIVTLKNSLFDVKVLSGVNKFVGLANYVNVFKDPKVQTSISFTVEFVVVSMVFHVVL
GVILALILNMKFKGRRFLRTIVLIPWAMPAVVIGMAAKWGFNNDYGLVNDFIRRFVPNFQYDWMINTGSARAAVIAMDLW
KDLPFFAILVLSGLQFISGDIYEAAKVDGANGVQSFFRITLPLILKNIITLCIPFTLWRLTTFDLVYAMTSGGPGEDTSL
IAYRITTEAFTNLNVGYASTLAVMLFIVMAVFSFINIKFMSKLAD

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=284, Percent_Identity=28.8732394366197, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787570, Length=230, Percent_Identity=30.8695652173913, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1790465, Length=269, Percent_Identity=27.1375464684015, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32000; Mature: 32000

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWIPWILILPVVIIRGFTTLYPIIVTLKNSLFDVKVLSGVNKFVGLANYVNVFKDPKVQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TSISFTVEFVVVSMVFHVVLGVILALILNMKFKGRRFLRTIVLIPWAMPAVVIGMAAKWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FNNDYGLVNDFIRRFVPNFQYDWMINTGSARAAVIAMDLWKDLPFFAILVLSGLQFISGD
CCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
IYEAAKVDGANGVQSFFRITLPLILKNIITLCIPFTLWRLTTFDLVYAMTSGGPGEDTSL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE
IAYRITTEAFTNLNVGYASTLAVMLFIVMAVFSFINIKFMSKLAD
EEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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EEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]