Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is 238925840

Identifier: 238925840

GI number: 238925840

Start: 3275338

End: 3275643

Strand: Direct

Name: 238925840

Synonym: EUBREC_3498

Alternate gene names: NA

Gene position: 3275338-3275643 (Clockwise)

Preceding gene: 238925839

Following gene: 238925841

Centisome position: 94.95

GC content: 54.58

Gene sequence:

>306_bases
ATGGCGGAGGGAGTGGGTTTTCCATTCCCTTCATTGCCTTTGAATGAAGGGCGCACTTATGGACAACCAGAGGTCGTCCT
TATAAGTTTGCCACAAGTGGCAACCGGTCTGCGCTTACGCTTGCCGGGCTCGTTCCGTCGGCGGGGCTTTCAGCCAGACC
TGCTCATGCCGCAGGGGGCACTCTTGCGCAGAGGGCGTTCCGACAGCTTCACTCCTGCAAAACCAGAAGAAGATGCTGTC
GGAAATCAATGCCGGATACGGCAGAAAGGGGGAATCGTATCATGGCGATATTTCACTTTACAGTAA

Upstream 100 bases:

>100_bases
TACCAAAGTTGATAGGCTTCTTAAAAAGGCAGGAAACAAACGGGAAGTTTTTCTCAAAAGCGATGCAGAAAGAATTAGTT
ACAGACATGGAGGAAGTGTA

Downstream 100 bases:

>100_bases
AGATTGTCGGGCGCAGTAAAGGAAAATCTGTCATATCCGCATCGGCATATCTTAATGGAGATGTGATGAAGAATGAGGAA
ACAGGCAGAATCAGTTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MAEGVGFPFPSLPLNEGRTYGQPEVVLISLPQVATGLRLRLPGSFRRRGFQPDLLMPQGALLRRGRSDSFTPAKPEEDAV
GNQCRIRQKGGIVSWRYFTLQ

Sequences:

>Translated_101_residues
MAEGVGFPFPSLPLNEGRTYGQPEVVLISLPQVATGLRLRLPGSFRRRGFQPDLLMPQGALLRRGRSDSFTPAKPEEDAV
GNQCRIRQKGGIVSWRYFTLQ
>Mature_100_residues
AEGVGFPFPSLPLNEGRTYGQPEVVLISLPQVATGLRLRLPGSFRRRGFQPDLLMPQGALLRRGRSDSFTPAKPEEDAVG
NQCRIRQKGGIVSWRYFTLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11256; Mature: 11125

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEGVGFPFPSLPLNEGRTYGQPEVVLISLPQVATGLRLRLPGSFRRRGFQPDLLMPQGA
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCHHHHCCCCCCCCCCCCH
LLRRGRSDSFTPAKPEEDAVGNQCRIRQKGGIVSWRYFTLQ
HHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEC
>Mature Secondary Structure 
AEGVGFPFPSLPLNEGRTYGQPEVVLISLPQVATGLRLRLPGSFRRRGFQPDLLMPQGA
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCHHHHCCCCCCCCCCCCH
LLRRGRSDSFTPAKPEEDAVGNQCRIRQKGGIVSWRYFTLQ
HHHCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA