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The map label for this gene is slyA [C]

Identifier: 238925834

GI number: 238925834

Start: 3270767

End: 3271204

Strand: Reverse

Name: slyA [C]

Synonym: EUBREC_3492

Alternate gene names: 238925834

Gene position: 3271204-3270767 (Counterclockwise)

Preceding gene: 238925835

Following gene: 238925833

Centisome position: 94.83

GC content: 41.78

Gene sequence:

>438_bases
ATGGAAATGAATGGAGGATTTCTTGTCACCAAAATAAAACAGCTTGGAGACCGGATTTTTGAGAAGATTCTCAGTGAAAA
GAATATTGATGCGTTTAATGGAGCCCAGGGACGTATTCTTTATGTGCTGTGGCAGGAGGATGGTATCTCAATCAGGTCAC
TCTCGATTAAATGCGGATTAGCGATAACATCTCTTACTACGATGCTGGAAAGAATGGAAAATCAAGGGCTGATAAGCCGT
GTTCAGTCTAAAACGGACAAAAGGAAAACACTCCTGTTTCTGACTGAGAAAGCACATGCCTTAAAGGGCGAGTACGATTC
TGTATCTGATGAGATGGGCAGTATTTACTATAAAGGTTTTTCAGAGGAAGAAATTACCCGGTTTGAGGAATGCCTCGATC
GCATCAGAAAGAATCTTGAGGAGTGGCAGAAGTCATGA

Upstream 100 bases:

>100_bases
ATTGAAAAAAACGAAATTTACCTATTAAGACATATAAACTCTTGACAATAAAACTCCTATATAGTATGTTTTTAATAAAC
TACTATATAGGAGCTTTTGT

Downstream 100 bases:

>100_bases
GTATTTGTATCAAAGATCAGATTCAGAACATGAATATCGTCATTGGCTGCACAGTGGGGTGTGCATATTGCTATGCCCGC
AACAACGTGAAACGCTGGCA

Product: transcriptional regulator MarR family

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; SlyA-Like Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQEDGISIRSLSIKCGLAITSLTTMLERMENQGLISR
VQSKTDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEEWQKS

Sequences:

>Translated_145_residues
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQEDGISIRSLSIKCGLAITSLTTMLERMENQGLISR
VQSKTDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEEWQKS
>Mature_145_residues
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQEDGISIRSLSIKCGLAITSLTTMLERMENQGLISR
VQSKTDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGFSEEEITRFEECLDRIRKNLEEWQKS

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16723; Mature: 16723

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQEDGISIRSLSIKCGL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEHHH
AITSLTTMLERMENQGLISRVQSKTDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGF
HHHHHHHHHHHHHCCHHHHHHHHHHCHHHEEEEEECHHHHHCCCCHHHHHHHHHHHCCCC
SEEEITRFEECLDRIRKNLEEWQKS
CHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEMNGGFLVTKIKQLGDRIFEKILSEKNIDAFNGAQGRILYVLWQEDGISIRSLSIKCGL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEHHH
AITSLTTMLERMENQGLISRVQSKTDKRKTLLFLTEKAHALKGEYDSVSDEMGSIYYKGF
HHHHHHHHHHHHHCCHHHHHHHHHHCHHHEEEEEECHHHHHCCCCHHHHHHHHHHHCCCC
SEEEITRFEECLDRIRKNLEEWQKS
CHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA