| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925819
Identifier: 238925819
GI number: 238925819
Start: 3258953
End: 3260185
Strand: Direct
Name: 238925819
Synonym: EUBREC_3477
Alternate gene names: NA
Gene position: 3258953-3260185 (Clockwise)
Preceding gene: 238925817
Following gene: 238925829
Centisome position: 94.47
GC content: 38.2
Gene sequence:
>1233_bases ATGAAAAAAATCCAATTTTTGAAAGTGGGTGACTATATGAAAACAATCACGAGAACTAAATATCTCGATAGAATCATTGA ACTGAATGGCACTCCTGACATCAAGATCATCACGGGTATTCGTCGTTCTGGTAAGTCCAAGCTGATGCAAGCGTATATTG AGTATCTGAAAAGCAACTTTGAAAACATCAATATTATCTTCATTGACTTCATGGATTTAGCATATGAAGAAATCATGGAA TACCATGCCTTACACGCATATGTGGAAGAACATTATCAGGAAGGTAAAACGAACTACCTGTTTGTAGATGAGGTTCAAAT GTGTCCTAATTTTGAGCTGGCAATTAATAGCCTGTACTCTAAGGGAATTTACGACATCTATGTAACAGGCTCCAATGCTT TCCTGTTGAGTGCAGATCTGGCAACCCTGTTTACCGGACGCTATATTGAAATTCATGTGTTTCCTTTCAGTTTCCAGGAA TATTGCCAATATTATGATGATGTTAGTGATAAAGATAAACTCTTTGATGATTACACAATCAAAGGCGGTTTAGCAGGTTC TTACGCTTACAGAACTGAAAAAGACAGAACAAACTATATCAAAGAGGTCTACGAAACTATTGTTACAAGGGATTTGGTGC AGAAATATGCTCTCCCGGACACTTTGGTTTTACAACGTCTGAGCGAATTCCTTATGGATAATATCAGCAACCTGACTTCT CCGAATAAGGTCAGTCAGCTACTGACAGCAAATGAGACTCCAACCAATCATGTAACCGTTGGCAAGTACATTAAGTATTT GTGCAATGCTTTTGTATTTTATGATATTAAGAGATACGACATCCGAGGTAAGAAATACCTTGAAAGCTCTGAAAAGTTCT ATTTATGTGACAGCGGTATTCGATATGCAATACTTGGAAGCAGAAATATGGATTATGGCAGAGTATATGAAAACATCGTT TGCATCGAGCTTCTTCGCCGTGGATACGATGTCTATGTCGGCAAGCTCTATCAAAAGGAAATCGACTTTGTTGCTCAGCG AGGCAGCGAGAAGTTTTATATTCAAGTCAGCGACAACATTTCCGGTCAGGAAACATTTGAGAGAGAATGCTCTCCTCTCC TTCAGATTCGAGATGCTTATCCGAAAATGATTATTGCCAGAACCAAACATCCACAATATAGCTATGAAGGAATTGAAATT CACGATATAGCCGATTGGTTACTACAAGAATAA
Upstream 100 bases:
>100_bases TCCACTTTCAAAAAATAAAAAAATTTGTGTTTTTGAAAGTGACATCTTGCATATACTATTAGCAAACAGTATACTAAGTA CAACGAAGCAGTTTCGAGAA
Downstream 100 bases:
>100_bases GCAGGGCGAAATATCTCCGTCATTCTCTTTTTCTTTTTGCCAAATACTGTAAGTATAACTCCTGCAAACATAACCACTAC AAATGACCATGCTGTGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKKIQFLKVGDYMKTITRTKYLDRIIELNGTPDIKIITGIRRSGKSKLMQAYIEYLKSNFENINIIFIDFMDLAYEEIME YHALHAYVEEHYQEGKTNYLFVDEVQMCPNFELAINSLYSKGIYDIYVTGSNAFLLSADLATLFTGRYIEIHVFPFSFQE YCQYYDDVSDKDKLFDDYTIKGGLAGSYAYRTEKDRTNYIKEVYETIVTRDLVQKYALPDTLVLQRLSEFLMDNISNLTS PNKVSQLLTANETPTNHVTVGKYIKYLCNAFVFYDIKRYDIRGKKYLESSEKFYLCDSGIRYAILGSRNMDYGRVYENIV CIELLRRGYDVYVGKLYQKEIDFVAQRGSEKFYIQVSDNISGQETFERECSPLLQIRDAYPKMIIARTKHPQYSYEGIEI HDIADWLLQE
Sequences:
>Translated_410_residues MKKIQFLKVGDYMKTITRTKYLDRIIELNGTPDIKIITGIRRSGKSKLMQAYIEYLKSNFENINIIFIDFMDLAYEEIME YHALHAYVEEHYQEGKTNYLFVDEVQMCPNFELAINSLYSKGIYDIYVTGSNAFLLSADLATLFTGRYIEIHVFPFSFQE YCQYYDDVSDKDKLFDDYTIKGGLAGSYAYRTEKDRTNYIKEVYETIVTRDLVQKYALPDTLVLQRLSEFLMDNISNLTS PNKVSQLLTANETPTNHVTVGKYIKYLCNAFVFYDIKRYDIRGKKYLESSEKFYLCDSGIRYAILGSRNMDYGRVYENIV CIELLRRGYDVYVGKLYQKEIDFVAQRGSEKFYIQVSDNISGQETFERECSPLLQIRDAYPKMIIARTKHPQYSYEGIEI HDIADWLLQE >Mature_410_residues MKKIQFLKVGDYMKTITRTKYLDRIIELNGTPDIKIITGIRRSGKSKLMQAYIEYLKSNFENINIIFIDFMDLAYEEIME YHALHAYVEEHYQEGKTNYLFVDEVQMCPNFELAINSLYSKGIYDIYVTGSNAFLLSADLATLFTGRYIEIHVFPFSFQE YCQYYDDVSDKDKLFDDYTIKGGLAGSYAYRTEKDRTNYIKEVYETIVTRDLVQKYALPDTLVLQRLSEFLMDNISNLTS PNKVSQLLTANETPTNHVTVGKYIKYLCNAFVFYDIKRYDIRGKKYLESSEKFYLCDSGIRYAILGSRNMDYGRVYENIV CIELLRRGYDVYVGKLYQKEIDFVAQRGSEKFYIQVSDNISGQETFERECSPLLQIRDAYPKMIIARTKHPQYSYEGIEI HDIADWLLQE
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1544 and MJ1637 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48150; Mature: 48150
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIQFLKVGDYMKTITRTKYLDRIIELNGTPDIKIITGIRRSGKSKLMQAYIEYLKSNF CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCHHHHHHHHHHHHHCCC ENINIIFIDFMDLAYEEIMEYHALHAYVEEHYQEGKTNYLFVDEVQMCPNFELAINSLYS CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHC KGIYDIYVTGSNAFLLSADLATLFTGRYIEIHVFPFSFQEYCQYYDDVSDKDKLFDDYTI CCCEEEEEECCCEEEEECCHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCHHHHCCCEEE KGGLAGSYAYRTEKDRTNYIKEVYETIVTRDLVQKYALPDTLVLQRLSEFLMDNISNLTS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC PNKVSQLLTANETPTNHVTVGKYIKYLCNAFVFYDIKRYDIRGKKYLESSEKFYLCDSGI CHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHEEEEHCCCCCHHHHCCCCCEEEECCCC RYAILGSRNMDYGRVYENIVCIELLRRGYDVYVGKLYQKEIDFVAQRGSEKFYIQVSDNI EEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC SGQETFERECSPLLQIRDAYPKMIIARTKHPQYSYEGIEIHDIADWLLQE CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHCC >Mature Secondary Structure MKKIQFLKVGDYMKTITRTKYLDRIIELNGTPDIKIITGIRRSGKSKLMQAYIEYLKSNF CCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCHHHHHHHHHHHHHCCC ENINIIFIDFMDLAYEEIMEYHALHAYVEEHYQEGKTNYLFVDEVQMCPNFELAINSLYS CCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHC KGIYDIYVTGSNAFLLSADLATLFTGRYIEIHVFPFSFQEYCQYYDDVSDKDKLFDDYTI CCCEEEEEECCCEEEEECCHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCHHHHCCCEEE KGGLAGSYAYRTEKDRTNYIKEVYETIVTRDLVQKYALPDTLVLQRLSEFLMDNISNLTS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC PNKVSQLLTANETPTNHVTVGKYIKYLCNAFVFYDIKRYDIRGKKYLESSEKFYLCDSGI CHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHEEEEHCCCCCHHHHCCCCCEEEECCCC RYAILGSRNMDYGRVYENIVCIELLRRGYDVYVGKLYQKEIDFVAQRGSEKFYIQVSDNI EEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC SGQETFERECSPLLQIRDAYPKMIIARTKHPQYSYEGIEIHDIADWLLQE CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]