| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925806
Identifier: 238925806
GI number: 238925806
Start: 3252732
End: 3253202
Strand: Reverse
Name: 238925806
Synonym: EUBREC_3464
Alternate gene names: NA
Gene position: 3253202-3252732 (Counterclockwise)
Preceding gene: 238925807
Following gene: 238925805
Centisome position: 94.3
GC content: 38.85
Gene sequence:
>471_bases ATGAGTAAAAAATTAGTGGCATTTTTCAGTGCAAGCGGAACAACAAAAAAAGTAGCAGAGATGATCGCAGAGGAAGTAAA AGCGGATTTGTTTGAGATTGAGCCGAAAGTTCCATATACAAAGCCTGATCTTGACTGGATGAATAAAAAATCCAGAAGCA GTGTGGAAATGAGTGATAAGAAATATAGACCGGAGATTATGAAAAAAGAGATGGATATGAGTTCTTATGACGAGATCCTT CTGGGATTCCCAATCTGGTGGTATGTTGCGCCGACAATCATCAATACATTTTTAGAAGCTTACGATTTCAGTGGTAAAAA GATTGTGCTTTTTGCAACATCCGGAGGAAGTGGATTTGGAAACACTGTGAAAGAATTGCAGTCATCTGCACCGGATGCGG TTATTACAGAAGGCAGACTGCTAAATTGTGGAACGAAACAGGAAATCAGTGAATGGGTAAACTCTTTATAA
Upstream 100 bases:
>100_bases ATAATAAAAATATCAGGTATAAAATAGATGTATAAGAGAAATTCAAATCTTATACATCTATTTTTATACAAAAAATTCGC AAAGAAAGGGGATTTTTATT
Downstream 100 bases:
>100_bases ATAACAGCGTTATGGAGGTATACAGAATATGGAAAAAATAGTACAGACAGCAGGAAGAAATGCACTTGGTGAATTCGCAC CGGAATTTGCACATTTTAAC
Product: flavodoxin
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Flavodoxin Protein; LOW QUALITY PROTEIN Flavodoxin; Flavodoxin Family Protein; Aldo/Keto Reductase; Carboxymuconolactone Decarboxylase; Lipoprotein
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSKKLVAFFSASGTTKKVAEMIAEEVKADLFEIEPKVPYTKPDLDWMNKKSRSSVEMSDKKYRPEIMKKEMDMSSYDEIL LGFPIWWYVAPTIINTFLEAYDFSGKKIVLFATSGGSGFGNTVKELQSSAPDAVITEGRLLNCGTKQEISEWVNSL
Sequences:
>Translated_156_residues MSKKLVAFFSASGTTKKVAEMIAEEVKADLFEIEPKVPYTKPDLDWMNKKSRSSVEMSDKKYRPEIMKKEMDMSSYDEIL LGFPIWWYVAPTIINTFLEAYDFSGKKIVLFATSGGSGFGNTVKELQSSAPDAVITEGRLLNCGTKQEISEWVNSL >Mature_155_residues SKKLVAFFSASGTTKKVAEMIAEEVKADLFEIEPKVPYTKPDLDWMNKKSRSSVEMSDKKYRPEIMKKEMDMSSYDEILL GFPIWWYVAPTIINTFLEAYDFSGKKIVLFATSGGSGFGNTVKELQSSAPDAVITEGRLLNCGTKQEISEWVNSL
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17555; Mature: 17424
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLVAFFSASGTTKKVAEMIAEEVKADLFEIEPKVPYTKPDLDWMNKKSRSSVEMSDK CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCH KYRPEIMKKEMDMSSYDEILLGFPIWWYVAPTIINTFLEAYDFSGKKIVLFATSGGSGFG HCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCH NTVKELQSSAPDAVITEGRLLNCGTKQEISEWVNSL HHHHHHHHCCCCCEECCCEEECCCCHHHHHHHHHCC >Mature Secondary Structure SKKLVAFFSASGTTKKVAEMIAEEVKADLFEIEPKVPYTKPDLDWMNKKSRSSVEMSDK CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCH KYRPEIMKKEMDMSSYDEILLGFPIWWYVAPTIINTFLEAYDFSGKKIVLFATSGGSGFG HCCHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCH NTVKELQSSAPDAVITEGRLLNCGTKQEISEWVNSL HHHHHHHHCCCCCEECCCEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA