| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925659
Identifier: 238925659
GI number: 238925659
Start: 3146163
End: 3147119
Strand: Reverse
Name: 238925659
Synonym: EUBREC_3316
Alternate gene names: NA
Gene position: 3147119-3146163 (Counterclockwise)
Preceding gene: 238925660
Following gene: 238925658
Centisome position: 91.23
GC content: 45.98
Gene sequence:
>957_bases GTGCTGACAGGAGGTGCCGCAACACCAGTAGTAGCTGACGTTGCAGTAGCAGTAGGGAGCGGAACAGCAGTATTCGGAGC TGCAGATGCCATAGAGGGCACTCAGGATATTTATTATGGAAGCACAGGTGACATTGACAGCACGGCAGTAAACGGCATAA AGGATGACCTGTTTCAGGGAAACGAGGACGCATATTATCTGACAGAAAATACCTTTGCATTTGCGGTATCCGCAATGATT CCAATCGGGCAGGCATCTACAGCGGGAAATCTGACATTCAAAAGCACAGCAACAATAGTCGCCAAAGAAGGCATCTCAAT GGGAGCCGGAGCCGGTGCGCAGAAGATAACCACAGATGTGACAGGAAATGATACAGCAGGAATGGTTGCCGGTATGGTTG CGAGTGGAATGACAGCAAAAGGGCTGAATGGAATTGAAGCAGAGGCGAACAAGCTGGCGAAAGCCCCAAAAGGGATTGAT GGAGTAACCGAGGGAGCTGGAAATTTAGCGGAAGATGTGGGGAAAGCCGGAAAAGGGCTCGAGGGAGCAGCCAAGGGAGC CGAGAGTGCAGCGGAAGATGCTGGGAAGGTTGTTGAGACCAGCTATGGGAAGTCAAGCGAAAAATTAAACTGGGACGCAA TTGTTAGTAAGAAAGGTGAAACCAGGGTTGAGCATATTAAGCGACATACGGTTCAAAATAATAGTCGAGAAACACATAGT GTATTTAACGGGAATCCGATAGATATGGTAAATGATGCATGGGAACAACGTCATTTGGTTGAACCGATATCGGATGGAAT GGGAGGAACAATTTATAACATTCCGTACAAAAATGCAGGCTATGAAAGTGGATATATTAATACTGGTGCTCAAATGGATT ATATAACAATAGTAACGCTGGATGAAAGTACTGATTTAATAACCGCATTTCCGTCTTTTGGAGATTATCATAAGTGA
Upstream 100 bases:
>100_bases GATAAAAAGTCAGAGAGACATTTCGATTGTAAGTAAAGACACAGGGAATCTGGAGGACAGTTGGAGGAGCAGTACTAATT GCGACGGGGCAGCATGCATA
Downstream 100 bases:
>100_bases TAGGAGGAACCTAAAATGTATAATATTGGTTACTGTAAGATATGCAAGCAAGGCTTACTTGAAATTGTAAAAGATAAATT AACTAAAAAAATATTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MLTGGAATPVVADVAVAVGSGTAVFGAADAIEGTQDIYYGSTGDIDSTAVNGIKDDLFQGNEDAYYLTENTFAFAVSAMI PIGQASTAGNLTFKSTATIVAKEGISMGAGAGAQKITTDVTGNDTAGMVAGMVASGMTAKGLNGIEAEANKLAKAPKGID GVTEGAGNLAEDVGKAGKGLEGAAKGAESAAEDAGKVVETSYGKSSEKLNWDAIVSKKGETRVEHIKRHTVQNNSRETHS VFNGNPIDMVNDAWEQRHLVEPISDGMGGTIYNIPYKNAGYESGYINTGAQMDYITIVTLDESTDLITAFPSFGDYHK
Sequences:
>Translated_318_residues MLTGGAATPVVADVAVAVGSGTAVFGAADAIEGTQDIYYGSTGDIDSTAVNGIKDDLFQGNEDAYYLTENTFAFAVSAMI PIGQASTAGNLTFKSTATIVAKEGISMGAGAGAQKITTDVTGNDTAGMVAGMVASGMTAKGLNGIEAEANKLAKAPKGID GVTEGAGNLAEDVGKAGKGLEGAAKGAESAAEDAGKVVETSYGKSSEKLNWDAIVSKKGETRVEHIKRHTVQNNSRETHS VFNGNPIDMVNDAWEQRHLVEPISDGMGGTIYNIPYKNAGYESGYINTGAQMDYITIVTLDESTDLITAFPSFGDYHK >Mature_318_residues MLTGGAATPVVADVAVAVGSGTAVFGAADAIEGTQDIYYGSTGDIDSTAVNGIKDDLFQGNEDAYYLTENTFAFAVSAMI PIGQASTAGNLTFKSTATIVAKEGISMGAGAGAQKITTDVTGNDTAGMVAGMVASGMTAKGLNGIEAEANKLAKAPKGID GVTEGAGNLAEDVGKAGKGLEGAAKGAESAAEDAGKVVETSYGKSSEKLNWDAIVSKKGETRVEHIKRHTVQNNSRETHS VFNGNPIDMVNDAWEQRHLVEPISDGMGGTIYNIPYKNAGYESGYINTGAQMDYITIVTLDESTDLITAFPSFGDYHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32757; Mature: 32757
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGGAATPVVADVAVAVGSGTAVFGAADAIEGTQDIYYGSTGDIDSTAVNGIKDDLFQG CCCCCCCCHHHHHHHHHCCCCCEEEECHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHCC NEDAYYLTENTFAFAVSAMIPIGQASTAGNLTFKSTATIVAKEGISMGAGAGAQKITTDV CCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCEEECC TGNDTAGMVAGMVASGMTAKGLNGIEAEANKLAKAPKGIDGVTEGAGNLAEDVGKAGKGL CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHCCCCC EGAAKGAESAAEDAGKVVETSYGKSSEKLNWDAIVSKKGETRVEHIKRHTVQNNSRETHS CHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHCCCCCCHHH VFNGNPIDMVNDAWEQRHLVEPISDGMGGTIYNIPYKNAGYESGYINTGAQMDYITIVTL HCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEE DESTDLITAFPSFGDYHK CCCCCEEEECCCCCCCCC >Mature Secondary Structure MLTGGAATPVVADVAVAVGSGTAVFGAADAIEGTQDIYYGSTGDIDSTAVNGIKDDLFQG CCCCCCCCHHHHHHHHHCCCCCEEEECHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHCC NEDAYYLTENTFAFAVSAMIPIGQASTAGNLTFKSTATIVAKEGISMGAGAGAQKITTDV CCCEEEEECCCHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCCCCCCCCEEECC TGNDTAGMVAGMVASGMTAKGLNGIEAEANKLAKAPKGIDGVTEGAGNLAEDVGKAGKGL CCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHCCCCC EGAAKGAESAAEDAGKVVETSYGKSSEKLNWDAIVSKKGETRVEHIKRHTVQNNSRETHS CHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHCCCCCCHHH VFNGNPIDMVNDAWEQRHLVEPISDGMGGTIYNIPYKNAGYESGYINTGAQMDYITIVTL HCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEE DESTDLITAFPSFGDYHK CCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA