| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925416
Identifier: 238925416
GI number: 238925416
Start: 2933860
End: 2935116
Strand: Direct
Name: 238925416
Synonym: EUBREC_3071
Alternate gene names: NA
Gene position: 2933860-2935116 (Clockwise)
Preceding gene: 238925415
Following gene: 238925419
Centisome position: 85.05
GC content: 28.72
Gene sequence:
>1257_bases ATGGAACAATTGAACACCGTAATTTTCGATATCGTAATAGAATTTTTACTTATTTTTTTATTGTACTCAGATACAATAAA AACCTCATTATATAAATTTTATACATGTGCTGTTATTTTCTTTTTCTCTGTTGTATTACTATACGTTCTACCAAATATAG CTTCTCCACTTATTGATTTTTTTCTTGAAATGCTGTTAGTATTTATCTTATTAACAGACAAATGGTACAATAAAATCGTT TCATTTGTCCTTGTATATATTTTGGATTCATTACTCTATCAGGCTCTTGCTCTTATTTGCGATTTAATCTTAGGTTTTCC AATATTTGTTGGCATGAATACGGTTAAAGAAAAAAATATAATAAAAACCATAGTAATCCTGATGCTGGCAATTGCTCTTT TTATAAAAATCAGGAAAAAATACCACTTTTCCTTATCTTTAAAAAATAAAATTTTTATATGCGGATATACAGGTACTATA TGTATTATATTATCAATTTCACAGCTATACCAGAATCTGATTAATAGTTACTTTTTGTATTCATTTGCCTTACTGTGCAT TGTATCATCAGGAATTATACTAGCTTACATTATCTCTTTATCCGAAAGAAATATAAATTATGAAAATCTACAGAAACAAA CTCAGTATGTAAATATTTTAAAGCATTATTATAACGAAACCAAAGAGAAAAACTTAGAAATTCGCAAACTAAAACACGAT ATCAAAAATCAAGTTAATGTTTTATCCCAGTTACTGGAATCCGAAAACTATAAAGAAGCATTAAACTATATCGATTCTCT TAAAAAGCACACTTTAAATAAAACGCCTTCCATAATTGATACTGGAAATGTTCTTGTAAATGCTATTATTATGCAAAAGC AGGCAGAATATCCTGACATAAAAATCATATCTAAGGGGGCTATAAGAAACAATCTCACCGTTAACGACTATGATTTATGC AGTATATTGAACAATCTTCTGGATAATGCTCTTGAATACAGTGCCAAGAATAATTTTAGTACCGTCTGGTTAAACATATA TCTGGAAGCTTCTGTTTTGCTCATAGACGTTGTTAATAATATATCCGCACCTATAGATATCAGTAAATTCTCTTCAACCA CAAAAGCTGATAGTATAAATCACGGACTTGGATTAGCAATTGTTAAAGAAACGGTTCATTATTACAATGGTTCACTTAAA TATGAACTCTCTGAATCACAAATAACTGCTAAAGTTCGGTTGTTTACTGTGGAATAA
Upstream 100 bases:
>100_bases TTATTCTTACTACTGATACTACTGTTCCACTTGCGCGAAGACGTAAGAAACAGGTTCAGACTAAGATCGCACAAAATATT TATGAAAAGGCAGAGAGCAT
Downstream 100 bases:
>100_bases CTCCAACATACAACTAAAGGCGGCAAATTGCCAACAACTTGTTGACGATTTGCCGTCTCTTATTTTCTTACCACTTTATA CCAATGTGATACGATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MEQLNTVIFDIVIEFLLIFLLYSDTIKTSLYKFYTCAVIFFFSVVLLYVLPNIASPLIDFFLEMLLVFILLTDKWYNKIV SFVLVYILDSLLYQALALICDLILGFPIFVGMNTVKEKNIIKTIVILMLAIALFIKIRKKYHFSLSLKNKIFICGYTGTI CIILSISQLYQNLINSYFLYSFALLCIVSSGIILAYIISLSERNINYENLQKQTQYVNILKHYYNETKEKNLEIRKLKHD IKNQVNVLSQLLESENYKEALNYIDSLKKHTLNKTPSIIDTGNVLVNAIIMQKQAEYPDIKIISKGAIRNNLTVNDYDLC SILNNLLDNALEYSAKNNFSTVWLNIYLEASVLLIDVVNNISAPIDISKFSSTTKADSINHGLGLAIVKETVHYYNGSLK YELSESQITAKVRLFTVE
Sequences:
>Translated_418_residues MEQLNTVIFDIVIEFLLIFLLYSDTIKTSLYKFYTCAVIFFFSVVLLYVLPNIASPLIDFFLEMLLVFILLTDKWYNKIV SFVLVYILDSLLYQALALICDLILGFPIFVGMNTVKEKNIIKTIVILMLAIALFIKIRKKYHFSLSLKNKIFICGYTGTI CIILSISQLYQNLINSYFLYSFALLCIVSSGIILAYIISLSERNINYENLQKQTQYVNILKHYYNETKEKNLEIRKLKHD IKNQVNVLSQLLESENYKEALNYIDSLKKHTLNKTPSIIDTGNVLVNAIIMQKQAEYPDIKIISKGAIRNNLTVNDYDLC SILNNLLDNALEYSAKNNFSTVWLNIYLEASVLLIDVVNNISAPIDISKFSSTTKADSINHGLGLAIVKETVHYYNGSLK YELSESQITAKVRLFTVE >Mature_418_residues MEQLNTVIFDIVIEFLLIFLLYSDTIKTSLYKFYTCAVIFFFSVVLLYVLPNIASPLIDFFLEMLLVFILLTDKWYNKIV SFVLVYILDSLLYQALALICDLILGFPIFVGMNTVKEKNIIKTIVILMLAIALFIKIRKKYHFSLSLKNKIFICGYTGTI CIILSISQLYQNLINSYFLYSFALLCIVSSGIILAYIISLSERNINYENLQKQTQYVNILKHYYNETKEKNLEIRKLKHD IKNQVNVLSQLLESENYKEALNYIDSLKKHTLNKTPSIIDTGNVLVNAIIMQKQAEYPDIKIISKGAIRNNLTVNDYDLC SILNNLLDNALEYSAKNNFSTVWLNIYLEASVLLIDVVNNISAPIDISKFSSTTKADSINHGLGLAIVKETVHYYNGSLK YELSESQITAKVRLFTVE
Specific function: Unknown
COG id: COG2972
COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47932; Mature: 47932
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQLNTVIFDIVIEFLLIFLLYSDTIKTSLYKFYTCAVIFFFSVVLLYVLPNIASPLIDF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLEMLLVFILLTDKWYNKIVSFVLVYILDSLLYQALALICDLILGFPIFVGMNTVKEKNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IKTIVILMLAIALFIKIRKKYHFSLSLKNKIFICGYTGTICIILSISQLYQNLINSYFLY HHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH SFALLCIVSSGIILAYIISLSERNINYENLQKQTQYVNILKHYYNETKEKNLEIRKLKHD HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IKNQVNVLSQLLESENYKEALNYIDSLKKHTLNKTPSIIDTGNVLVNAIIMQKQAEYPDI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHCCCCCCE KIISKGAIRNNLTVNDYDLCSILNNLLDNALEYSAKNNFSTVWLNIYLEASVLLIDVVNN EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHC ISAPIDISKFSSTTKADSINHGLGLAIVKETVHYYNGSLKYELSESQITAKVRLFTVE CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHEEEEEEEEEEC >Mature Secondary Structure MEQLNTVIFDIVIEFLLIFLLYSDTIKTSLYKFYTCAVIFFFSVVLLYVLPNIASPLIDF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLEMLLVFILLTDKWYNKIVSFVLVYILDSLLYQALALICDLILGFPIFVGMNTVKEKNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH IKTIVILMLAIALFIKIRKKYHFSLSLKNKIFICGYTGTICIILSISQLYQNLINSYFLY HHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH SFALLCIVSSGIILAYIISLSERNINYENLQKQTQYVNILKHYYNETKEKNLEIRKLKHD HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH IKNQVNVLSQLLESENYKEALNYIDSLKKHTLNKTPSIIDTGNVLVNAIIMQKQAEYPDI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHCCCCCCE KIISKGAIRNNLTVNDYDLCSILNNLLDNALEYSAKNNFSTVWLNIYLEASVLLIDVVNN EEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHC ISAPIDISKFSSTTKADSINHGLGLAIVKETVHYYNGSLKYELSESQITAKVRLFTVE CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA