| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925391
Identifier: 238925391
GI number: 238925391
Start: 2918087
End: 2918509
Strand: Direct
Name: 238925391
Synonym: EUBREC_3046
Alternate gene names: NA
Gene position: 2918087-2918509 (Clockwise)
Preceding gene: 238925382
Following gene: 238925415
Centisome position: 84.59
GC content: 39.72
Gene sequence:
>423_bases ATGAAACAGGTATATCCAGTTATATTTACACAATTAAAGGATAAGAAAGACACCGTGCTTATTAATGTTCCTGATATGGG TATATTAACAGAGGGCTTCGGTCTGTCAGACGCTATAGAGATGGCTCGCGATGCCATTGGGGCAAATGGAATCACATTAC AGGATCTAGGCAGGGAAATTCCGGTTCCAAGTGATATTTCAGATATTGACATCAAAAATGGTACTTTTGACAAAGATGGT ATTAGTCATGTTTCATTTGTGGATATAGATTTTGATGAATACCGCCGCAAGACCGACAATAAAACGGTACGAAGAAATGT CACTCTCCCTAATTGGCTTAATCAGGAAGCTGAGAAATCCCATATCAACGTATCTCGCGTTTTGCAGGAGGCTCTCATGG TAAAGCTAGGTGTATCAAGATAA
Upstream 100 bases:
>100_bases AATCATGTCAAGTCTTTTCTTATTCTTTGATTTATAAAAGCTGTTGACTTATCCCCACTCAATGTATATATTATATATAC ATTGAGTGGGGATATTATAT
Downstream 100 bases:
>100_bases ATAAATTTAAAAGCCAAATCAAACTAAAAAGAGTGCAGGTTATTTATTGGATAGCCTACACTCTTATTTTGTTCTCATAC ATCAAAGAGAATTTCAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKQVYPVIFTQLKDKKDTVLINVPDMGILTEGFGLSDAIEMARDAIGANGITLQDLGREIPVPSDISDIDIKNGTFDKDG ISHVSFVDIDFDEYRRKTDNKTVRRNVTLPNWLNQEAEKSHINVSRVLQEALMVKLGVSR
Sequences:
>Translated_140_residues MKQVYPVIFTQLKDKKDTVLINVPDMGILTEGFGLSDAIEMARDAIGANGITLQDLGREIPVPSDISDIDIKNGTFDKDG ISHVSFVDIDFDEYRRKTDNKTVRRNVTLPNWLNQEAEKSHINVSRVLQEALMVKLGVSR >Mature_140_residues MKQVYPVIFTQLKDKKDTVLINVPDMGILTEGFGLSDAIEMARDAIGANGITLQDLGREIPVPSDISDIDIKNGTFDKDG ISHVSFVDIDFDEYRRKTDNKTVRRNVTLPNWLNQEAEKSHINVSRVLQEALMVKLGVSR
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15716; Mature: 15716
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVYPVIFTQLKDKKDTVLINVPDMGILTEGFGLSDAIEMARDAIGANGITLQDLGREI CCCCHHHHHHHHCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHCCCCC PVPSDISDIDIKNGTFDKDGISHVSFVDIDFDEYRRKTDNKTVRRNVTLPNWLNQEAEKS CCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCEEEECCCCCCHHCCHHHHH HINVSRVLQEALMVKLGVSR CCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKQVYPVIFTQLKDKKDTVLINVPDMGILTEGFGLSDAIEMARDAIGANGITLQDLGREI CCCCHHHHHHHHCCCCCEEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHCCCCC PVPSDISDIDIKNGTFDKDGISHVSFVDIDFDEYRRKTDNKTVRRNVTLPNWLNQEAEKS CCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCEEEECCCCCCHHCCHHHHH HINVSRVLQEALMVKLGVSR CCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA