Click here to switch to the map view.

The map label for this gene is pdxT [H]

Identifier: 238925298

GI number: 238925298

Start: 2834557

End: 2835147

Strand: Direct

Name: pdxT [H]

Synonym: EUBREC_2952

Alternate gene names: 238925298

Gene position: 2834557-2835147 (Clockwise)

Preceding gene: 238925297

Following gene: 238925307

Centisome position: 82.17

GC content: 47.04

Gene sequence:

>591_bases
ATGAAATCAGGACTTAAGATTGGTGTTTTAGCCGTTCAGGGAGCGTTTATTGAGCACAAGCGCATGCTTGAGTCTCTTGG
GTGCGAATGTGTAGAGCTGCGCCGGAAATCAGATATCTGTGACTTAGACGGACTCGTGCTGCCTGGAGGTGAGAGCACTG
TGCAAGGCAAGCTGCTCCGTGAGCTTGATATGTTTGATGAGCTTAAGGAAAGAATCGCAAACGGACTTCCGGTGCTTGCA
ACCTGCGCCGGTCTTATCCTTTTAGCTTCTCATATCAGCAACGATGACAACGTATATTTCGGCACTTTGCCTGTCACTGT
TAAAAGAAATGCCTACGGCAGACAGCTTGGAAGCTTTGAGGCTACAGCAAGGTTTGACAATAGCTTTGACTTTACCATGA
CATTTATCAGGGCGCCTTACGTGGAAGCTATTGACGACTCCGCCAAAAATGATGTACATGTGCTCGCCGAGTATGACGGC
AAAATTGTCGGCGTGCAGTATAAGAACCAGATTGGGCTGGCTTTCCATCCGGAGCTTGATGATGATACACGGATTCATGA
GAGGTTTTTGGAGATGATATCTGCAAATTAA

Upstream 100 bases:

>100_bases
GCAAAGCTCATCGCAGAGCTTTCTGAGGATCTCGGTGAGGCTATGGTCGGAATCAACGAGAGCGAGATTAAAATCATCAT
GGAAGAAAGAGGCAAATAAA

Downstream 100 bases:

>100_bases
ATCACGTCTATATTATGATTAAAGGGTCAAAATATCTTTTGACCCTCATATCATATTATTGAATGGCTATATGTGATATT
ACACATCTAATCTGAAACAT

Product: glutamine amidotransferase subunit PdxT

Products: NA

Alternate protein names: Glutamine amidotransferase glutaminase subunit pdxT [H]

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKSGLKIGVLAVQGAFIEHKRMLESLGCECVELRRKSDICDLDGLVLPGGESTVQGKLLRELDMFDELKERIANGLPVLA
TCAGLILLASHISNDDNVYFGTLPVTVKRNAYGRQLGSFEATARFDNSFDFTMTFIRAPYVEAIDDSAKNDVHVLAEYDG
KIVGVQYKNQIGLAFHPELDDDTRIHERFLEMISAN

Sequences:

>Translated_196_residues
MKSGLKIGVLAVQGAFIEHKRMLESLGCECVELRRKSDICDLDGLVLPGGESTVQGKLLRELDMFDELKERIANGLPVLA
TCAGLILLASHISNDDNVYFGTLPVTVKRNAYGRQLGSFEATARFDNSFDFTMTFIRAPYVEAIDDSAKNDVHVLAEYDG
KIVGVQYKNQIGLAFHPELDDDTRIHERFLEMISAN
>Mature_196_residues
MKSGLKIGVLAVQGAFIEHKRMLESLGCECVELRRKSDICDLDGLVLPGGESTVQGKLLRELDMFDELKERIANGLPVLA
TCAGLILLASHISNDDNVYFGTLPVTVKRNAYGRQLGSFEATARFDNSFDFTMTFIRAPYVEAIDDSAKNDVHVLAEYDG
KIVGVQYKNQIGLAFHPELDDDTRIHERFLEMISAN

Specific function: Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to pdxS [H]

COG id: COG0311

COG function: function code H; Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine amidotransferase pdxT/SNO family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323995, Length=210, Percent_Identity=37.1428571428571, Blast_Score=115, Evalue=6e-27,
Organism=Saccharomyces cerevisiae, GI6321048, Length=210, Percent_Identity=37.6190476190476, Blast_Score=114, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6323742, Length=214, Percent_Identity=35.5140186915888, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002161
- InterPro:   IPR021196 [H]

Pfam domain/function: PF01174 SNO [H]

EC number: NA

Molecular weight: Translated: 21755; Mature: 21755

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS51130 PDXT_SNO_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSGLKIGVLAVQGAFIEHKRMLESLGCECVELRRKSDICDLDGLVLPGGESTVQGKLLR
CCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHH
ELDMFDELKERIANGLPVLATCAGLILLASHISNDDNVYFGTLPVTVKRNAYGRQLGSFE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCC
ATARFDNSFDFTMTFIRAPYVEAIDDSAKNDVHVLAEYDGKIVGVQYKNQIGLAFHPELD
CEEECCCCCCEEEHHHHCCHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCEEECCCCC
DDTRIHERFLEMISAN
CCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSGLKIGVLAVQGAFIEHKRMLESLGCECVELRRKSDICDLDGLVLPGGESTVQGKLLR
CCCCCEEEEEEECCHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHH
ELDMFDELKERIANGLPVLATCAGLILLASHISNDDNVYFGTLPVTVKRNAYGRQLGSFE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCC
ATARFDNSFDFTMTFIRAPYVEAIDDSAKNDVHVLAEYDGKIVGVQYKNQIGLAFHPELD
CEEECCCCCCEEEHHHHCCHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCEEECCCCC
DDTRIHERFLEMISAN
CCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA