| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925205
Identifier: 238925205
GI number: 238925205
Start: 2738893
End: 2740197
Strand: Reverse
Name: 238925205
Synonym: EUBREC_2859
Alternate gene names: NA
Gene position: 2740197-2738893 (Counterclockwise)
Preceding gene: 238925206
Following gene: 238925204
Centisome position: 79.43
GC content: 41.07
Gene sequence:
>1305_bases ATGGGGGAATTATATATGAACAAACATCACAAAACAGTACTAATACCAGCCCTTTGCATTGCAGCATTTTTTACCATGTC TGCATGTGCAGACAGCAAAACGGCAGATACGCAGCAGAAGAATACAGCGGATAAATCATACACGCAGCAGGGGATTGATA TAGCTGCGTATGAGAAAAAGCTTGCCGATAACAGGGAGAATTATAAGCTAGGCTGTGAACAGTATAGCACAGATACCGAT GCGGTAAAAAACAAGGATTACAGGAATTTATCGTTTACAAATTGTACTTTTAAAGATATGCCGGAAACGAATGAGTTGTA TGTCATGGAGGGGGGAGTACACGGCATTACTACACAGGAGAGCTGGGATACAATAAAGGACTGGCTTGAATCAATCGGTA AGCTCGATACAACTGATATGGATTCGGAGGTAAGGATCATAAACAGTGACCTTGGAATGGATGATACAAAGGAAACACCA TACAGTTATCCGGCTCTTAAGGATCATATGGATCTTGCATCAGGAGTAGGAGCACTTGTAAATACGAATGAGTGTCATAT ACAGATAGCGGATAATGGCATATATTCAATGAGTGATGGAAAGATAGGAGCATATCTGAATACGGATGCGCATGCGAGCA GTGACGCTCTTGGAACATACACAGATGATGTTGTAAAATCGGGGACAATAGACGAGCTTGGAAAAGAAAGCTATCAGCTT ATAAATGGTGAATTGACCATTGAACAGGGGGCAGAGCTTACAGGGGAATATTTTGAAAACGGTACTCCGTTTGTACCCAC AGATGGCATTACATTGTCAGTTCCGGAGGTTCGCGTGTTCAAGCTCGGACAGGTGTACGGATATGATTATATGGTTCAAA GGCAGTACCATGGTGTTCCAATAGCATATCATGATTATGGAAATTATCAGATATATGGAAATGAGTATAATTTTGAAGAG GATATCAAACATGCATATGTAGTGGATTCTGATGGAGTCAGTGCTTATGCGGGAGTTAACGATTCGGAACCGCTGGAAAA TTTGTATTCGTCGGATGGGATATTGGGAATAAAGGATGCCGCAGATATTTTAAGCGGGAAGATGGCAAAGTTTTTAAATG TTGATGTACAAAGTGTATGTCTTACATATGTACCGCTTAATTTTGGAGATGGTTCTGAGTGCAAAATATATCTTCCGGCA TGGCAGTTTGACGGAATAAACAGGACTAAGGACGAAAATATCAGGATGTATCTTGATGCATTTACAGGAGAGGTCTATTA CTATACCTATGGGGAGGCGGCTTAG
Upstream 100 bases:
>100_bases GAAAAGATGCAATGCAAAAGGTACGATTTATAAAGTAGTATAAAAAAGATAAAAATATGTTAGCCGGTATGTTTCCCATA CCGGCTAATTGTGTTACAAA
Downstream 100 bases:
>100_bases TATGATAAGGGCGGAAATGAAAAAATATCTGTATTTTCCGTATCTGCTTCTTGCGGTCATAGGATGTGTTGTACTTGCTT TTAGCGCAAATGCGGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MGELYMNKHHKTVLIPALCIAAFFTMSACADSKTADTQQKNTADKSYTQQGIDIAAYEKKLADNRENYKLGCEQYSTDTD AVKNKDYRNLSFTNCTFKDMPETNELYVMEGGVHGITTQESWDTIKDWLESIGKLDTTDMDSEVRIINSDLGMDDTKETP YSYPALKDHMDLASGVGALVNTNECHIQIADNGIYSMSDGKIGAYLNTDAHASSDALGTYTDDVVKSGTIDELGKESYQL INGELTIEQGAELTGEYFENGTPFVPTDGITLSVPEVRVFKLGQVYGYDYMVQRQYHGVPIAYHDYGNYQIYGNEYNFEE DIKHAYVVDSDGVSAYAGVNDSEPLENLYSSDGILGIKDAADILSGKMAKFLNVDVQSVCLTYVPLNFGDGSECKIYLPA WQFDGINRTKDENIRMYLDAFTGEVYYYTYGEAA
Sequences:
>Translated_434_residues MGELYMNKHHKTVLIPALCIAAFFTMSACADSKTADTQQKNTADKSYTQQGIDIAAYEKKLADNRENYKLGCEQYSTDTD AVKNKDYRNLSFTNCTFKDMPETNELYVMEGGVHGITTQESWDTIKDWLESIGKLDTTDMDSEVRIINSDLGMDDTKETP YSYPALKDHMDLASGVGALVNTNECHIQIADNGIYSMSDGKIGAYLNTDAHASSDALGTYTDDVVKSGTIDELGKESYQL INGELTIEQGAELTGEYFENGTPFVPTDGITLSVPEVRVFKLGQVYGYDYMVQRQYHGVPIAYHDYGNYQIYGNEYNFEE DIKHAYVVDSDGVSAYAGVNDSEPLENLYSSDGILGIKDAADILSGKMAKFLNVDVQSVCLTYVPLNFGDGSECKIYLPA WQFDGINRTKDENIRMYLDAFTGEVYYYTYGEAA >Mature_433_residues GELYMNKHHKTVLIPALCIAAFFTMSACADSKTADTQQKNTADKSYTQQGIDIAAYEKKLADNRENYKLGCEQYSTDTDA VKNKDYRNLSFTNCTFKDMPETNELYVMEGGVHGITTQESWDTIKDWLESIGKLDTTDMDSEVRIINSDLGMDDTKETPY SYPALKDHMDLASGVGALVNTNECHIQIADNGIYSMSDGKIGAYLNTDAHASSDALGTYTDDVVKSGTIDELGKESYQLI NGELTIEQGAELTGEYFENGTPFVPTDGITLSVPEVRVFKLGQVYGYDYMVQRQYHGVPIAYHDYGNYQIYGNEYNFEED IKHAYVVDSDGVSAYAGVNDSEPLENLYSSDGILGIKDAADILSGKMAKFLNVDVQSVCLTYVPLNFGDGSECKIYLPAW QFDGINRTKDENIRMYLDAFTGEVYYYTYGEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48320; Mature: 48189
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGELYMNKHHKTVLIPALCIAAFFTMSACADSKTADTQQKNTADKSYTQQGIDIAAYEKK CCCCEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCCHHHHHHH LADNRENYKLGCEQYSTDTDAVKNKDYRNLSFTNCTFKDMPETNELYVMEGGVHGITTQE HHCCCCCCEECHHHCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCC SWDTIKDWLESIGKLDTTDMDSEVRIINSDLGMDDTKETPYSYPALKDHMDLASGVGALV HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE NTNECHIQIADNGIYSMSDGKIGAYLNTDAHASSDALGTYTDDVVKSGTIDELGKESYQL ECCEEEEEEECCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHCCHHHEE INGELTIEQGAELTGEYFENGTPFVPTDGITLSVPEVRVFKLGQVYGYDYMVQRQYHGVP ECCEEEECCCCCCCHHHHCCCCCCCCCCCEEEECCCEEEEEEEEHHCCEEEEEHHCCCCC IAYHDYGNYQIYGNEYNFEEDIKHAYVVDSDGVSAYAGVNDSEPLENLYSSDGILGIKDA EEEEECCCEEEECCCCCCHHHCCEEEEEECCCCEEECCCCCCHHHHHHHCCCCEEEEHHH ADILSGKMAKFLNVDVQSVCLTYVPLNFGDGSECKIYLPAWQFDGINRTKDENIRMYLDA HHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEE FTGEVYYYTYGEAA ECCEEEEEEECCCC >Mature Secondary Structure GELYMNKHHKTVLIPALCIAAFFTMSACADSKTADTQQKNTADKSYTQQGIDIAAYEKK CCCEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHCCCCHHHHHHH LADNRENYKLGCEQYSTDTDAVKNKDYRNLSFTNCTFKDMPETNELYVMEGGVHGITTQE HHCCCCCCEECHHHCCCCCHHHCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCCCCC SWDTIKDWLESIGKLDTTDMDSEVRIINSDLGMDDTKETPYSYPALKDHMDLASGVGALV HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE NTNECHIQIADNGIYSMSDGKIGAYLNTDAHASSDALGTYTDDVVKSGTIDELGKESYQL ECCEEEEEEECCCEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHHHHCCHHHEE INGELTIEQGAELTGEYFENGTPFVPTDGITLSVPEVRVFKLGQVYGYDYMVQRQYHGVP ECCEEEECCCCCCCHHHHCCCCCCCCCCCEEEECCCEEEEEEEEHHCCEEEEEHHCCCCC IAYHDYGNYQIYGNEYNFEEDIKHAYVVDSDGVSAYAGVNDSEPLENLYSSDGILGIKDA EEEEECCCEEEECCCCCCHHHCCEEEEEECCCCEEECCCCCCHHHHHHHCCCCEEEEHHH ADILSGKMAKFLNVDVQSVCLTYVPLNFGDGSECKIYLPAWQFDGINRTKDENIRMYLDA HHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEEE FTGEVYYYTYGEAA ECCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA