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The map label for this gene is ybbR [H]

Identifier: 238925127

GI number: 238925127

Start: 2657687

End: 2659120

Strand: Reverse

Name: ybbR [H]

Synonym: EUBREC_2780

Alternate gene names: 238925127

Gene position: 2659120-2657687 (Counterclockwise)

Preceding gene: 238925128

Following gene: 238925126

Centisome position: 77.08

GC content: 44.0

Gene sequence:

>1434_bases
ATGGGAAAGAAGCTTCTAAAAACCTTCACAAATAATATAGGCTTTAAAATACTTGCGATAGCATTTGCATTTATACTCTG
GCTTGTGGTCTACAATCTCAATGACCCGGTCAAGACAAAGACATTTACCACAACAGTCACCGTCACAGGCCGTGATTCGG
TTGTTGACAAGGGGCTATGGCCTACCATCAAGGATTCGGAAAAGACCATCAGCTTTTCGGTATCAGGCAAGAGAAGCTAT
CTGAACGAGCTTGATGATTCCGATTTTTACGCAAATGTCGACCTTGCAAATATTATAGTAGATAAGGATGATACGAATAA
GGCAAGCGTAAAGGTAGATATTGGATGCACCAAGTACAGACATTCGATTACCTTCAACGGTGGAGACCATATGCTCCCGC
TTTCGGTTGAAAAATATATGCAGAAGCAGTTTGAGGTAAAGGTATCATTGGATGGAAGTCTCTCAGGTGCGAAAGCACTG
GGAAACAAGCCACAGGCAAATCCAAAGGTAGTAAAGATCGGAGGTCCTGAGTCCATTGTTTCAACTATAGCATCGGCCAA
TGTAAATATAAAGGTCGATGACAATACCATAATATCAGATAATCAGATAACTGATCGCGGTGATCTCACTCTGATTGATG
ATAATGGCGATGAGATAGATATATCAAAGCTTGATGTGGACAGCCAGTATCAGTCTATAGCAGTGACAGTTGATGTCCTA
AGTACCAAGGAGGTGCCTATCAAGTGTACTACGACAGGCTCACCGGCAGGAGGAAAGAGCGTGCTCGGAGTAGAACTATC
AGAGGAGTCTGTAATGCTCAAAGGTAATGCAGAAGCATTGAACAATATCACATCTATAGATGTGGGACCAATTGATATAT
CGGGCGCAACAGACGATATAAGTACATCTGTTGACCTGACAGGATATCTGCCGGATGGAGTTTTTATAGTGAACTCATCC
AAGGCAAAGCTCAGTATAGATATAAAGATTGAAACAAATGCGACTTCAACCATGACGCTGAACAGTTCCAATATCACATA
TGACGGACTGGAAGAGGGATATACGATTACATTTGTAACAGATAAGAGCAGTGTCATAGTAAGCGGCACCAAGTCTGATA
TAGATACACTTTCGGGAACTACACTGAAGGGTAAAATTGATGTGACAGGCCTTGGTACAGGTACACATACAGTGACGGTA
AAGCCAAATCTGGATGAGACCAAGTACACATGGGGCGAGATAAAGGTTCAGATAGTTATCGGAAGGGAAGGTGACGGAGG
CGGCACAACGGGAACTGATGGTACAGGAACAGCCTCGGGCTCAACAACAGGCGGTACAACATCAGGCGACACCGGCACAG
GCGGTTCATCGTCATCGGGCAGCACATCGTCAGGAAACACCGGAAATAACGGCTCTGACAGTTCATCACATTGA

Upstream 100 bases:

>100_bases
CACGATATAGATGCCGATCATCTACGCACACAGCTTAAGCTTCTGCAGAACAGACATAGGGAGCCGGGTAAATTTGAATT
AATTAAAAGGAGGTTTAAGA

Downstream 100 bases:

>100_bases
TAGATATATAACCGAAAAGAGGTAATAAAAGTGGTAGCACAAAAAATAATAATCAAGAATCCTACCGGATTACATTTACG
TCCGGCCGGCAATCTCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MGKKLLKTFTNNIGFKILAIAFAFILWLVVYNLNDPVKTKTFTTTVTVTGRDSVVDKGLWPTIKDSEKTISFSVSGKRSY
LNELDDSDFYANVDLANIIVDKDDTNKASVKVDIGCTKYRHSITFNGGDHMLPLSVEKYMQKQFEVKVSLDGSLSGAKAL
GNKPQANPKVVKIGGPESIVSTIASANVNIKVDDNTIISDNQITDRGDLTLIDDNGDEIDISKLDVDSQYQSIAVTVDVL
STKEVPIKCTTTGSPAGGKSVLGVELSEESVMLKGNAEALNNITSIDVGPIDISGATDDISTSVDLTGYLPDGVFIVNSS
KAKLSIDIKIETNATSTMTLNSSNITYDGLEEGYTITFVTDKSSVIVSGTKSDIDTLSGTTLKGKIDVTGLGTGTHTVTV
KPNLDETKYTWGEIKVQIVIGREGDGGGTTGTDGTGTASGSTTGGTTSGDTGTGGSSSSGSTSSGNTGNNGSDSSSH

Sequences:

>Translated_477_residues
MGKKLLKTFTNNIGFKILAIAFAFILWLVVYNLNDPVKTKTFTTTVTVTGRDSVVDKGLWPTIKDSEKTISFSVSGKRSY
LNELDDSDFYANVDLANIIVDKDDTNKASVKVDIGCTKYRHSITFNGGDHMLPLSVEKYMQKQFEVKVSLDGSLSGAKAL
GNKPQANPKVVKIGGPESIVSTIASANVNIKVDDNTIISDNQITDRGDLTLIDDNGDEIDISKLDVDSQYQSIAVTVDVL
STKEVPIKCTTTGSPAGGKSVLGVELSEESVMLKGNAEALNNITSIDVGPIDISGATDDISTSVDLTGYLPDGVFIVNSS
KAKLSIDIKIETNATSTMTLNSSNITYDGLEEGYTITFVTDKSSVIVSGTKSDIDTLSGTTLKGKIDVTGLGTGTHTVTV
KPNLDETKYTWGEIKVQIVIGREGDGGGTTGTDGTGTASGSTTGGTTSGDTGTGGSSSSGSTSSGNTGNNGSDSSSH
>Mature_476_residues
GKKLLKTFTNNIGFKILAIAFAFILWLVVYNLNDPVKTKTFTTTVTVTGRDSVVDKGLWPTIKDSEKTISFSVSGKRSYL
NELDDSDFYANVDLANIIVDKDDTNKASVKVDIGCTKYRHSITFNGGDHMLPLSVEKYMQKQFEVKVSLDGSLSGAKALG
NKPQANPKVVKIGGPESIVSTIASANVNIKVDDNTIISDNQITDRGDLTLIDDNGDEIDISKLDVDSQYQSIAVTVDVLS
TKEVPIKCTTTGSPAGGKSVLGVELSEESVMLKGNAEALNNITSIDVGPIDISGATDDISTSVDLTGYLPDGVFIVNSSK
AKLSIDIKIETNATSTMTLNSSNITYDGLEEGYTITFVTDKSSVIVSGTKSDIDTLSGTTLKGKIDVTGLGTGTHTVTVK
PNLDETKYTWGEIKVQIVIGREGDGGGTTGTDGTGTASGSTTGGTTSGDTGTGGSSSSGSTSSGNTGNNGSDSSSH

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 49936; Mature: 49805

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKLLKTFTNNIGFKILAIAFAFILWLVVYNLNDPVKTKTFTTTVTVTGRDSVVDKGLW
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHHHCCCCC
PTIKDSEKTISFSVSGKRSYLNELDDSDFYANVDLANIIVDKDDTNKASVKVDIGCTKYR
CCCCCCCEEEEEEECCCHHHHHHCCCCCEEEECEEEEEEEECCCCCCEEEEEEECCEEEE
HSITFNGGDHMLPLSVEKYMQKQFEVKVSLDGSLSGAKALGNKPQANPKVVKIGGPESIV
EEEEECCCCEEEEHHHHHHHCEEEEEEEEECCCCCCHHHCCCCCCCCCEEEEECCHHHHH
STIASANVNIKVDDNTIISDNQITDRGDLTLIDDNGDEIDISKLDVDSQYQSIAVTVDVL
HHHHHCCEEEEECCCEEECCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEEEEE
STKEVPIKCTTTGSPAGGKSVLGVELSEESVMLKGNAEALNNITSIDVGPIDISGATDDI
CCCCCCEEEEECCCCCCCCEEEEEEECCCEEEEECCHHHHCCCEEEECCCEEECCCCCCC
STSVDLTGYLPDGVFIVNSSKAKLSIDIKIETNATSTMTLNSSNITYDGLEEGYTITFVT
CCEEEEEEECCCCEEEEECCCEEEEEEEEEECCCCEEEEECCCCCEECCCCCCEEEEEEE
DKSSVIVSGTKSDIDTLSGTTLKGKIDVTGLGTGTHTVTVKPNLDETKYTWGEIKVQIVI
CCCCEEEECCCCCHHHCCCCEEEEEEEEEEECCCCEEEEECCCCCCCEEEEEEEEEEEEE
GREGDGGGTTGTDGTGTASGSTTGGTTSGDTGTGGSSSSGSTSSGNTGNNGSDSSSH
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GKKLLKTFTNNIGFKILAIAFAFILWLVVYNLNDPVKTKTFTTTVTVTGRDSVVDKGLW
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCHHHHCCCCC
PTIKDSEKTISFSVSGKRSYLNELDDSDFYANVDLANIIVDKDDTNKASVKVDIGCTKYR
CCCCCCCEEEEEEECCCHHHHHHCCCCCEEEECEEEEEEEECCCCCCEEEEEEECCEEEE
HSITFNGGDHMLPLSVEKYMQKQFEVKVSLDGSLSGAKALGNKPQANPKVVKIGGPESIV
EEEEECCCCEEEEHHHHHHHCEEEEEEEEECCCCCCHHHCCCCCCCCCEEEEECCHHHHH
STIASANVNIKVDDNTIISDNQITDRGDLTLIDDNGDEIDISKLDVDSQYQSIAVTVDVL
HHHHHCCEEEEECCCEEECCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEEEEE
STKEVPIKCTTTGSPAGGKSVLGVELSEESVMLKGNAEALNNITSIDVGPIDISGATDDI
CCCCCCEEEEECCCCCCCCEEEEEEECCCEEEEECCHHHHCCCEEEECCCEEECCCCCCC
STSVDLTGYLPDGVFIVNSSKAKLSIDIKIETNATSTMTLNSSNITYDGLEEGYTITFVT
CCEEEEEEECCCCEEEEECCCEEEEEEEEEECCCCEEEEECCCCCEECCCCCCEEEEEEE
DKSSVIVSGTKSDIDTLSGTTLKGKIDVTGLGTGTHTVTVKPNLDETKYTWGEIKVQIVI
CCCCEEEECCCCCHHHCCCCEEEEEEEEEEECCCCEEEEECCCCCCCEEEEEEEEEEEEE
GREGDGGGTTGTDGTGTASGSTTGGTTSGDTGTGGSSSSGSTSSGNTGNNGSDSSSH
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]