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The map label for this gene is epsD [H]

Identifier: 238925117

GI number: 238925117

Start: 2646538

End: 2647638

Strand: Reverse

Name: epsD [H]

Synonym: EUBREC_2770

Alternate gene names: 238925117

Gene position: 2647638-2646538 (Counterclockwise)

Preceding gene: 238925118

Following gene: 238925116

Centisome position: 76.75

GC content: 36.15

Gene sequence:

>1101_bases
ATGAAAAAATCACTTATAATCACAACGATAGGTGGGTTTGTGTCCAGATTTGAGATGGATGATGTTCACATCATGCAGCA
GCTTGGTTTTGAAGTACATTACGCATCAAATTTTGAAAATAGGATATATGAGTTTGATAAGAAGGAATACATCGATAATG
GGATCAGGCTTCATCAGGTTGAAATAGATAAGAATCCTTATAATATCGTGGCTTTAAACAGAAGCCTTAAGGATATAATA
AGAATTATAAAAGAAGAAAAAATAGAGCTTATACATTGTCATACACCGGTAGGCGGAGTCCTTGGCCGATTGGCAGGAAA
GAAAACAGGTTGCAAGGTGATTTACACTGCACATGGATTTCATTTTTATACAGGAGCACCTGTTAAGAACTGGCTCATAT
ATTATCCGGTAGAGAAAGTTCTGGCAAAATATACAGATTGTCTGATTACAATAAATCAAGCAGATTTTGAAATGGCAAAG
AAAATGCATGTAAAAGACTACGCACGAATCCCGGGAGTGGGAATTGATCTTAGGAAATTTACGCCTCGGGAAGGTTATAA
GCGGGATGATAATTGTTTCAGAATAGTTTCAGTAGGTGAGCTTAATCGAAATAAGAATCATAGAGTAGTTATAAAAGCTA
TTAAGCAATTGAATGATAAACATATTCAATATTACATATATGGAAAGGGCAAAGCAAAAGAGGAACTGGAAAATCTGATT
ACTGAAAATCAATTAGAGAACCAGGTTCATTTGTGCGGATATGTTAATGACACACGTGAAGTACTTAAAGATGCAGATTG
CTTTGTTTTCCCTTCGGTAAGGGAGGGACTTGGAATGGCGGCTCTTGAAGCTATGGCATGTGGAGTACCCCTTATAGTAG
GTGACAACAGAGGAACAAGAGAATATGTCAATCACGGCGACAATGCATTTGCATGTGACCCTGATGATACAGATAGCTTT
GCATATTATATCAAAAAGATAAAAGATAATCCTGATTTAACTGAAATTATGGTTGAAAAGGGAATAAAAAAGGTACAATG
GTTTTCTAAAGAGCGCACTAACCTGATAATGAATCAGGTGTATAGGGAAATTGGTTTATGA

Upstream 100 bases:

>100_bases
CCTCTGTTACACCAACAGAGCCGGACAATCCGGTTACTCCACCGACAGAGTCTGATAATTCCTCGGAGGGTGAAGAGTCG
TTAGATGGAGAATAGCTATA

Downstream 100 bases:

>100_bases
GTAAATATGATGTGTCTATATCGGTGATAATGGGTGTGTACAATCAAAATGATGAGAAAGTCCTGAGAGAAGCTGTTGAC
TCTATACTTAATCAGACCTT

Product: Glycosyltransferase Family 4-like a-glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKKSLIITTIGGFVSRFEMDDVHIMQQLGFEVHYASNFENRIYEFDKKEYIDNGIRLHQVEIDKNPYNIVALNRSLKDII
RIIKEEKIELIHCHTPVGGVLGRLAGKKTGCKVIYTAHGFHFYTGAPVKNWLIYYPVEKVLAKYTDCLITINQADFEMAK
KMHVKDYARIPGVGIDLRKFTPREGYKRDDNCFRIVSVGELNRNKNHRVVIKAIKQLNDKHIQYYIYGKGKAKEELENLI
TENQLENQVHLCGYVNDTREVLKDADCFVFPSVREGLGMAALEAMACGVPLIVGDNRGTREYVNHGDNAFACDPDDTDSF
AYYIKKIKDNPDLTEIMVEKGIKKVQWFSKERTNLIMNQVYREIGL

Sequences:

>Translated_366_residues
MKKSLIITTIGGFVSRFEMDDVHIMQQLGFEVHYASNFENRIYEFDKKEYIDNGIRLHQVEIDKNPYNIVALNRSLKDII
RIIKEEKIELIHCHTPVGGVLGRLAGKKTGCKVIYTAHGFHFYTGAPVKNWLIYYPVEKVLAKYTDCLITINQADFEMAK
KMHVKDYARIPGVGIDLRKFTPREGYKRDDNCFRIVSVGELNRNKNHRVVIKAIKQLNDKHIQYYIYGKGKAKEELENLI
TENQLENQVHLCGYVNDTREVLKDADCFVFPSVREGLGMAALEAMACGVPLIVGDNRGTREYVNHGDNAFACDPDDTDSF
AYYIKKIKDNPDLTEIMVEKGIKKVQWFSKERTNLIMNQVYREIGL
>Mature_366_residues
MKKSLIITTIGGFVSRFEMDDVHIMQQLGFEVHYASNFENRIYEFDKKEYIDNGIRLHQVEIDKNPYNIVALNRSLKDII
RIIKEEKIELIHCHTPVGGVLGRLAGKKTGCKVIYTAHGFHFYTGAPVKNWLIYYPVEKVLAKYTDCLITINQADFEMAK
KMHVKDYARIPGVGIDLRKFTPREGYKRDDNCFRIVSVGELNRNKNHRVVIKAIKQLNDKHIQYYIYGKGKAKEELENLI
TENQLENQVHLCGYVNDTREVLKDADCFVFPSVREGLGMAALEAMACGVPLIVGDNRGTREYVNHGDNAFACDPDDTDSF
AYYIKKIKDNPDLTEIMVEKGIKKVQWFSKERTNLIMNQVYREIGL

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=194, Percent_Identity=28.8659793814433, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 42171; Mature: 42171

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLIITTIGGFVSRFEMDDVHIMQQLGFEVHYASNFENRIYEFDKKEYIDNGIRLHQV
CCCCEEEEEHHHHHHHHCCHHHHHHHHCCCEEEECCCCHHHHHHCCHHHHHCCCEEEEEE
EIDKNPYNIVALNRSLKDIIRIIKEEKIELIHCHTPVGGVLGRLAGKKTGCKVIYTAHGF
EECCCCEEEEEECHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCE
HFYTGAPVKNWLIYYPVEKVLAKYTDCLITINQADFEMAKKMHVKDYARIPGVGIDLRKF
EEEECCCHHHCEEEECHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHCC
TPREGYKRDDNCFRIVSVGELNRNKNHRVVIKAIKQLNDKHIQYYIYGKGKAKEELENLI
CCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH
TENQLENQVHLCGYVNDTREVLKDADCFVFPSVREGLGMAALEAMACGVPLIVGDNRGTR
HHHHHCCCEEEEEECCHHHHHHCCCCEEEECCHHHCCCHHHHHHHHCCCCEEEECCCCCH
EYVNHGDNAFACDPDDTDSFAYYIKKIKDNPDLTEIMVEKGIKKVQWFSKERTNLIMNQV
HHHCCCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YREIGL
HHHHCC
>Mature Secondary Structure
MKKSLIITTIGGFVSRFEMDDVHIMQQLGFEVHYASNFENRIYEFDKKEYIDNGIRLHQV
CCCCEEEEEHHHHHHHHCCHHHHHHHHCCCEEEECCCCHHHHHHCCHHHHHCCCEEEEEE
EIDKNPYNIVALNRSLKDIIRIIKEEKIELIHCHTPVGGVLGRLAGKKTGCKVIYTAHGF
EECCCCEEEEEECHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCE
HFYTGAPVKNWLIYYPVEKVLAKYTDCLITINQADFEMAKKMHVKDYARIPGVGIDLRKF
EEEECCCHHHCEEEECHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHCC
TPREGYKRDDNCFRIVSVGELNRNKNHRVVIKAIKQLNDKHIQYYIYGKGKAKEELENLI
CCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHH
TENQLENQVHLCGYVNDTREVLKDADCFVFPSVREGLGMAALEAMACGVPLIVGDNRGTR
HHHHHCCCEEEEEECCHHHHHHCCCCEEEECCHHHCCCHHHHHHHHCCCCEEEECCCCCH
EYVNHGDNAFACDPDDTDSFAYYIKKIKDNPDLTEIMVEKGIKKVQWFSKERTNLIMNQV
HHHCCCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YREIGL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]