| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is wcaJ [H]
Identifier: 238925106
GI number: 238925106
Start: 2628916
End: 2630202
Strand: Reverse
Name: wcaJ [H]
Synonym: EUBREC_2759
Alternate gene names: 238925106
Gene position: 2630202-2628916 (Counterclockwise)
Preceding gene: 238925107
Following gene: 238925105
Centisome position: 76.24
GC content: 32.25
Gene sequence:
>1287_bases ATGAAATCTAAAATTTCAGCGGGATGTCAGGTTTCAAGCCTGCTTATCCTTATAGTATTAGTAATAGAATATGGATTATT TTTCCTTGCAGTGCCGTTCGACAAAGTAAGTTCTCTTATGATGCTTGGATATATTTTTCTAACTTACATTATTACATGTA ATAATCATGGCAGGACTGTACATCTATATTATGAGAGAGAGTTAAGTCTTCTGTTTAAGTGTATTGCAACGGATTTTGTA ATGGGAGTTTTTTTGTATACATATTATTTGGATCATGGTAAAACTCGTGGAATTGGAATACTGTTTGCTGATGAAAAATG GTGGATAGGATACATTATTATGTTGGTTATGCACCTGATTTCAATTTTTGCATTATGTATTTTTTGGAATAAGTGTATTT ATCCCGGAAATAAGGGAAAGATACTTTATATATATGAAAAGGAAACTCCAAAAGATATGCGCATTATTGATGACTGTATA TCTATTGATGAAACAGAAAAGAAATTGATTGCTGAGATAATGAGCAATGAAATTATATATATATATGACGTTACGGCAGA AAAACGTAACGATATTTTAAAGACTTGTTTTGAGGCGGGAAAAGATGTATATTTGTCTACAAAGATTTCGGATATACAGC TTAGAGCATCATATCTGACACAGGATAGCGATCAGCCTTGCTTTTATTGCCAAAGACCTGCTATATCTAAAAAGGCTGTT ATAGTAAAACGTTTTTTTGATATAGTAATATCCATTATTGGACTGATTCTTACATCTTGGCTGTTTCTTATTGTTGCTAT TGCAATAAAAATAGAGGATGGAGGAAGCGTTTTTTACAGGCAGGACAGATGCACCAAGGATGGAAAGATTTTTTCTATTC TGAAATTCAGGAGTATGATAGAACATATTGAAGATGGAAAAATATACATAACAAAGCACAAGGATAATCGTATAACAAAA GTAGGATATATCATAAGAAAAACAAAGATTGATGAATTACCGCAATTGGTCAATATATTAAAAGGTGATATGAGTCTGGT AGGTCCGAGACCGGAAAGACCGGAACTTATAGCAGATATTTTAAAAGAAATACCTGAGTATAATTTTAGAACTACTGTGA AAGCCGGACTTACAGGATATGCGCAGGTTCATGGTGATTACCATACTGATTTTTTGGAAAAATTGAGATGGGATATGATA TATATAGAGAATTATTCAATCATTTTGGATTTGAAGATTTTGATTATGACAATTCCAACTATATTACGTGGGAGCAGTGA TGTATGA
Upstream 100 bases:
>100_bases AACCCTGAAAAATACCATAAACGATTGGGCAAGATGAAGGGCAATAAGCTTAAAAATGCAGTTGCCTGGAGATTAGTAGA AAGAAAATACAAGAGAAGAT
Downstream 100 bases:
>100_bases GATTAGCTGTATATAATTTTCTGGTGAATCGTCATCCGGGAATAAGACAAAAATATCATAATTATCATGACAGAGCGCAT GGATATAAAAATATATTGTC
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MKSKISAGCQVSSLLILIVLVIEYGLFFLAVPFDKVSSLMMLGYIFLTYIITCNNHGRTVHLYYERELSLLFKCIATDFV MGVFLYTYYLDHGKTRGIGILFADEKWWIGYIIMLVMHLISIFALCIFWNKCIYPGNKGKILYIYEKETPKDMRIIDDCI SIDETEKKLIAEIMSNEIIYIYDVTAEKRNDILKTCFEAGKDVYLSTKISDIQLRASYLTQDSDQPCFYCQRPAISKKAV IVKRFFDIVISIIGLILTSWLFLIVAIAIKIEDGGSVFYRQDRCTKDGKIFSILKFRSMIEHIEDGKIYITKHKDNRITK VGYIIRKTKIDELPQLVNILKGDMSLVGPRPERPELIADILKEIPEYNFRTTVKAGLTGYAQVHGDYHTDFLEKLRWDMI YIENYSIILDLKILIMTIPTILRGSSDV
Sequences:
>Translated_428_residues MKSKISAGCQVSSLLILIVLVIEYGLFFLAVPFDKVSSLMMLGYIFLTYIITCNNHGRTVHLYYERELSLLFKCIATDFV MGVFLYTYYLDHGKTRGIGILFADEKWWIGYIIMLVMHLISIFALCIFWNKCIYPGNKGKILYIYEKETPKDMRIIDDCI SIDETEKKLIAEIMSNEIIYIYDVTAEKRNDILKTCFEAGKDVYLSTKISDIQLRASYLTQDSDQPCFYCQRPAISKKAV IVKRFFDIVISIIGLILTSWLFLIVAIAIKIEDGGSVFYRQDRCTKDGKIFSILKFRSMIEHIEDGKIYITKHKDNRITK VGYIIRKTKIDELPQLVNILKGDMSLVGPRPERPELIADILKEIPEYNFRTTVKAGLTGYAQVHGDYHTDFLEKLRWDMI YIENYSIILDLKILIMTIPTILRGSSDV >Mature_428_residues MKSKISAGCQVSSLLILIVLVIEYGLFFLAVPFDKVSSLMMLGYIFLTYIITCNNHGRTVHLYYERELSLLFKCIATDFV MGVFLYTYYLDHGKTRGIGILFADEKWWIGYIIMLVMHLISIFALCIFWNKCIYPGNKGKILYIYEKETPKDMRIIDDCI SIDETEKKLIAEIMSNEIIYIYDVTAEKRNDILKTCFEAGKDVYLSTKISDIQLRASYLTQDSDQPCFYCQRPAISKKAV IVKRFFDIVISIIGLILTSWLFLIVAIAIKIEDGGSVFYRQDRCTKDGKIFSILKFRSMIEHIEDGKIYITKHKDNRITK VGYIIRKTKIDELPQLVNILKGDMSLVGPRPERPELIADILKEIPEYNFRTTVKAGLTGYAQVHGDYHTDFLEKLRWDMI YIENYSIILDLKILIMTIPTILRGSSDV
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=183, Percent_Identity=39.344262295082, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017473 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 49481; Mature: 49481
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKISAGCQVSSLLILIVLVIEYGLFFLAVPFDKVSSLMMLGYIFLTYIITCNNHGRTV CCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHEEECCCCCEE HLYYERELSLLFKCIATDFVMGVFLYTYYLDHGKTRGIGILFADEKWWIGYIIMLVMHLI EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH SIFALCIFWNKCIYPGNKGKILYIYEKETPKDMRIIDDCISIDETEKKLIAEIMSNEIIY HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEE IYDVTAEKRNDILKTCFEAGKDVYLSTKISDIQLRASYLTQDSDQPCFYCQRPAISKKAV EEECCCHHHHHHHHHHHHCCCCEEEEEEECHHEEEHHHHCCCCCCCCEEECCCCCCHHHH IVKRFFDIVISIIGLILTSWLFLIVAIAIKIEDGGSVFYRQDRCTKDGKIFSILKFRSMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCHHHHHHHHHHH EHIEDGKIYITKHKDNRITKVGYIIRKTKIDELPQLVNILKGDMSLVGPRPERPELIADI HHCCCCEEEEEECCCCCEEHHHHHHHHHCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHH LKEIPEYNFRTTVKAGLTGYAQVHGDYHTDFLEKLRWDMIYIENYSIILDLKILIMTIPT HHHCCCCCCEEEHHHCCCEEEEECCCHHHHHHHHHCCCEEEEECCEEEEHHHHHHHHHHH ILRGSSDV HHCCCCCC >Mature Secondary Structure MKSKISAGCQVSSLLILIVLVIEYGLFFLAVPFDKVSSLMMLGYIFLTYIITCNNHGRTV CCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHEEECCCCCEE HLYYERELSLLFKCIATDFVMGVFLYTYYLDHGKTRGIGILFADEKWWIGYIIMLVMHLI EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH SIFALCIFWNKCIYPGNKGKILYIYEKETPKDMRIIDDCISIDETEKKLIAEIMSNEIIY HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEE IYDVTAEKRNDILKTCFEAGKDVYLSTKISDIQLRASYLTQDSDQPCFYCQRPAISKKAV EEECCCHHHHHHHHHHHHCCCCEEEEEEECHHEEEHHHHCCCCCCCCEEECCCCCCHHHH IVKRFFDIVISIIGLILTSWLFLIVAIAIKIEDGGSVFYRQDRCTKDGKIFSILKFRSMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCCCCCCCHHHHHHHHHHH EHIEDGKIYITKHKDNRITKVGYIIRKTKIDELPQLVNILKGDMSLVGPRPERPELIADI HHCCCCEEEEEECCCCCEEHHHHHHHHHCHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHH LKEIPEYNFRTTVKAGLTGYAQVHGDYHTDFLEKLRWDMIYIENYSIILDLKILIMTIPT HHHCCCCCCEEEHHHCCCEEEEECCCHHHHHHHHHCCCEEEEECCEEEEHHHHHHHHHHH ILRGSSDV HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8759852; 9097040; 9278503 [H]