| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925098
Identifier: 238925098
GI number: 238925098
Start: 2613205
End: 2615718
Strand: Reverse
Name: 238925098
Synonym: EUBREC_2751
Alternate gene names: NA
Gene position: 2615718-2613205 (Counterclockwise)
Preceding gene: 238925099
Following gene: 238925097
Centisome position: 75.82
GC content: 38.42
Gene sequence:
>2514_bases ATGAAGACAAAAAAGTTTTTATCATTGGTGTTAAGTGCGGCTATGATATTAGGTGTGGCTGTTCCGGTCGCAGCAGAACC GGTGTCAGCAGGGCAAGGCGTTGAAGCAGAACAACAGCCAATTGTAGAAAATAGCATTACAAGTGGATATATTCTGAGTG ATTTGGATTATAATACACCGGTGTATGAACCGGATGAGTCGGTGCCGTATTCTGATGATTGGGGATATTCTGCAGATGAA ACTATAGAGAGCAAGTATCCGGCAAATGGAGTCAGCGATATCAAGGCGAAATATCCGTCTGTTCGTAATCAAAATCCTCT TGGCACATGCTGGACATTTTCGTCAATAGGTCTTGCAGAGTTTGACTTGATTAATGATGGTGCGTTTGATAAAAATATAG ATCTTAGTGAACTGCATCTGGCGTATTATGCATATAATTCGCTGTTAGATCCGCTTGGTGGAACAGTGGGGGACTATGCA AAGTACTATATGAATAATACAAGTGTTCAGTATGGTTATCTCAATCGTGGTGGAAACTATTTGATGGCGGCACGCAGAAT GGGACAGTGGTGTGGTCCGGTAAGCGAGAGTGATGTACCATATAGTAAGGTGGCAAGCAACGGATATACAGCAAGCACTA TTGATACTTTTCTTAATACAGGTTTATCTGATGAATATGCATATTCAAAGGATAAGGCACATCTGGAAAATACATACATG ATTAATATCAAGGAAAATGCATCAGATGTGAAAAAAGCCATAAAAAAATATGGTGCAGTGGGAATTATGTATAGTCATAA TGATACCGGATATCATTACATAAATAACAGTTATAATGATAAAACAAATAACAGAGCAGGTCATGCGGTAATGGTTGTTG GATGGGATGATAACTATTCTAAAGATAATTTCAGAGATGGTGTTAAACCTGAAAAAGATGGTGCATGGCTTATTCGTAAT AGTTGGGGAGACGGAACCGGTTCATATTATAATCAGAGTTATTTTTGGATGTCATATGAAACTTTTTCTTTATCCGATAC GGCTTGGGTGTTTGATTTTTCTGCTAATGATGGATATGATAACAATTATCAGGTTGATGGAGGATTAAATGTAGCCCATC AAAGCAGTTACAGGAAATTGGCCAATGTTTTTACTACTCAGACAAAACAGGGAGTATCTTCTGAGGACTTAAAAGCAGTT TCCCTGTCTATTACATCTAAAACAAATGTTAATTATACAATAGAGATTTATACAGATTTAAAGGATAAGACAAAGCCAAC CAGCGGAACAAAGCAGGAGACTGCTACCACTACAGGGCAGACAACCTATGCCGGAGTATACACAATTCCACTTAAATCAG CGGTTAATCTGAAGCCTGGGACAAACTATTCGGTTGTAGTGACTACTGATACACCTGCCGTTGACATTGAGGCAGCGATG ACCGGGGATGTAAATTATAATAATGAAATGGTGTGGGAGAATCATGCGTCAAGTGATAATACGGCAAGCTATTATTTCTA TGGGACAGGGTTGGCATATTCCAGCAGTTGGAATTATCAGAATGTGTATGGTAATTTCTGTATTAAAGCATTTACCGCCA ATAATGTAGAAAAAGATTCTGAGAAGCTTGTTGGCAGAAGCCTTACTTTAAAAGATAATATTGATATGAACTACTATATG GAGCTTCCTGAAAGTATCAAATCAAACAGCAACGCATATATGGAGTTTACGGTGAATAATAGCCAGCCATATAAGGTCAG CGTAAACGATGCAATCCCTGTTGAGAAAAACGGAAAGGTTATATATAAGTTTGCATGTCCACTAAATGCTGCACAGATGT CAGATACTGTTAAAGCCAAAATGGTGGTGGATGGTAATAGTGGAAATGAATACACTTACAGTGTAAAAGAATATGCCACC GAGCTCCTGTCAAAATCAAACGAGTATCCGGAAGAAACCATTAAGCTGGTGAAGGCACTCTTAAACTATGGAACGGCAGC GCAGAGCTTCTTTAAATATAACACAGGCAAGCCGGCAAACGCTATTTTAAGCGATACCGATAAAATTGTCGCAGCAGCTG ATTTTGCTGCATATAAGGCTGTCATTAAAACAGATAGTGCAAATAGTCAGAGTAATGGACTGACATATTACGGAAGCTCT CTGATATGTAAGTCTGAGATGACAGTAAGACATTATTTTATGGTGAACGAAGGCTGTGATATAAACAATTACAAGTTCAG CTATGTTAATGCATATGGCAATGAAGTCAGTCTGACACCTAAAAAGGCTTCAGATGGGGTGTATTGTGTAGATATAAACG GAATAATGGCACGCAACCTGAATAGTAATTATGCATGCAAAGTCACCGAAAAGAATAAGGCCTGTATTTTAGAGCTGGAC TATGGTCCGTTCAGCTATTCACAGAAGGTCATTAATAGTGGAAATTCATCTGCTGAATTAAAAAATCTGGTGAACGCACT ATATTGGTATTGGTATTATGGATATAGAAATTAA
Upstream 100 bases:
>100_bases AGTTAATACAATGGAGAACGATACATTGTAATTGTATTTTACATGGTAATCCGATATACTAGATATAAGTGTAGCAGATT ATTTTAATGGAGGAAGTCGA
Downstream 100 bases:
>100_bases AAAGACTGCATAATTAAAACCACTGCAGAATTTAACGCTTTAACTAAGCTGAATTCCTGAGGTAGTGTTTATGATTTCTT ACCTTGTCCAACCGCCGGCT
Product: cysteine proteinase
Products: NA
Alternate protein names: Adhesin-Like Protein With Cysteine Protease Domain; Cell Surface Protein; Cysteine Proteinase; 5-Nucleotidase/2' 3'-Cyclic Phosphodiesterase-Like Protein; Cell Surface-Associated Cysteine Protease; Preprotein Translocase Subunit SecD-Like Protein; Papain Family Protease; Cysteine Protease C1 Family Protein; Surface Layer Protein B; PKD Domain Containing Protein; Adhesin-Like Protein
Number of amino acids: Translated: 837; Mature: 837
Protein sequence:
>837_residues MKTKKFLSLVLSAAMILGVAVPVAAEPVSAGQGVEAEQQPIVENSITSGYILSDLDYNTPVYEPDESVPYSDDWGYSADE TIESKYPANGVSDIKAKYPSVRNQNPLGTCWTFSSIGLAEFDLINDGAFDKNIDLSELHLAYYAYNSLLDPLGGTVGDYA KYYMNNTSVQYGYLNRGGNYLMAARRMGQWCGPVSESDVPYSKVASNGYTASTIDTFLNTGLSDEYAYSKDKAHLENTYM INIKENASDVKKAIKKYGAVGIMYSHNDTGYHYINNSYNDKTNNRAGHAVMVVGWDDNYSKDNFRDGVKPEKDGAWLIRN SWGDGTGSYYNQSYFWMSYETFSLSDTAWVFDFSANDGYDNNYQVDGGLNVAHQSSYRKLANVFTTQTKQGVSSEDLKAV SLSITSKTNVNYTIEIYTDLKDKTKPTSGTKQETATTTGQTTYAGVYTIPLKSAVNLKPGTNYSVVVTTDTPAVDIEAAM TGDVNYNNEMVWENHASSDNTASYYFYGTGLAYSSSWNYQNVYGNFCIKAFTANNVEKDSEKLVGRSLTLKDNIDMNYYM ELPESIKSNSNAYMEFTVNNSQPYKVSVNDAIPVEKNGKVIYKFACPLNAAQMSDTVKAKMVVDGNSGNEYTYSVKEYAT ELLSKSNEYPEETIKLVKALLNYGTAAQSFFKYNTGKPANAILSDTDKIVAAADFAAYKAVIKTDSANSQSNGLTYYGSS LICKSEMTVRHYFMVNEGCDINNYKFSYVNAYGNEVSLTPKKASDGVYCVDINGIMARNLNSNYACKVTEKNKACILELD YGPFSYSQKVINSGNSSAELKNLVNALYWYWYYGYRN
Sequences:
>Translated_837_residues MKTKKFLSLVLSAAMILGVAVPVAAEPVSAGQGVEAEQQPIVENSITSGYILSDLDYNTPVYEPDESVPYSDDWGYSADE TIESKYPANGVSDIKAKYPSVRNQNPLGTCWTFSSIGLAEFDLINDGAFDKNIDLSELHLAYYAYNSLLDPLGGTVGDYA KYYMNNTSVQYGYLNRGGNYLMAARRMGQWCGPVSESDVPYSKVASNGYTASTIDTFLNTGLSDEYAYSKDKAHLENTYM INIKENASDVKKAIKKYGAVGIMYSHNDTGYHYINNSYNDKTNNRAGHAVMVVGWDDNYSKDNFRDGVKPEKDGAWLIRN SWGDGTGSYYNQSYFWMSYETFSLSDTAWVFDFSANDGYDNNYQVDGGLNVAHQSSYRKLANVFTTQTKQGVSSEDLKAV SLSITSKTNVNYTIEIYTDLKDKTKPTSGTKQETATTTGQTTYAGVYTIPLKSAVNLKPGTNYSVVVTTDTPAVDIEAAM TGDVNYNNEMVWENHASSDNTASYYFYGTGLAYSSSWNYQNVYGNFCIKAFTANNVEKDSEKLVGRSLTLKDNIDMNYYM ELPESIKSNSNAYMEFTVNNSQPYKVSVNDAIPVEKNGKVIYKFACPLNAAQMSDTVKAKMVVDGNSGNEYTYSVKEYAT ELLSKSNEYPEETIKLVKALLNYGTAAQSFFKYNTGKPANAILSDTDKIVAAADFAAYKAVIKTDSANSQSNGLTYYGSS LICKSEMTVRHYFMVNEGCDINNYKFSYVNAYGNEVSLTPKKASDGVYCVDINGIMARNLNSNYACKVTEKNKACILELD YGPFSYSQKVINSGNSSAELKNLVNALYWYWYYGYRN >Mature_837_residues MKTKKFLSLVLSAAMILGVAVPVAAEPVSAGQGVEAEQQPIVENSITSGYILSDLDYNTPVYEPDESVPYSDDWGYSADE TIESKYPANGVSDIKAKYPSVRNQNPLGTCWTFSSIGLAEFDLINDGAFDKNIDLSELHLAYYAYNSLLDPLGGTVGDYA KYYMNNTSVQYGYLNRGGNYLMAARRMGQWCGPVSESDVPYSKVASNGYTASTIDTFLNTGLSDEYAYSKDKAHLENTYM INIKENASDVKKAIKKYGAVGIMYSHNDTGYHYINNSYNDKTNNRAGHAVMVVGWDDNYSKDNFRDGVKPEKDGAWLIRN SWGDGTGSYYNQSYFWMSYETFSLSDTAWVFDFSANDGYDNNYQVDGGLNVAHQSSYRKLANVFTTQTKQGVSSEDLKAV SLSITSKTNVNYTIEIYTDLKDKTKPTSGTKQETATTTGQTTYAGVYTIPLKSAVNLKPGTNYSVVVTTDTPAVDIEAAM TGDVNYNNEMVWENHASSDNTASYYFYGTGLAYSSSWNYQNVYGNFCIKAFTANNVEKDSEKLVGRSLTLKDNIDMNYYM ELPESIKSNSNAYMEFTVNNSQPYKVSVNDAIPVEKNGKVIYKFACPLNAAQMSDTVKAKMVVDGNSGNEYTYSVKEYAT ELLSKSNEYPEETIKLVKALLNYGTAAQSFFKYNTGKPANAILSDTDKIVAAADFAAYKAVIKTDSANSQSNGLTYYGSS LICKSEMTVRHYFMVNEGCDINNYKFSYVNAYGNEVSLTPKKASDGVYCVDINGIMARNLNSNYACKVTEKNKACILELD YGPFSYSQKVINSGNSSAELKNLVNALYWYWYYGYRN
Specific function: Unknown
COG id: COG4870
COG function: function code O; Cysteine protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92876; Mature: 92876
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00139 THIOL_PROTEASE_CYS ; PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKKFLSLVLSAAMILGVAVPVAAEPVSAGQGVEAEQQPIVENSITSGYILSDLDYNTP CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCC VYEPDESVPYSDDWGYSADETIESKYPANGVSDIKAKYPSVRNQNPLGTCWTFSSIGLAE CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCEE FDLINDGAFDKNIDLSELHLAYYAYNSLLDPLGGTVGDYAKYYMNNTSVQYGYLNRGGNY EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCE LMAARRMGQWCGPVSESDVPYSKVASNGYTASTIDTFLNTGLSDEYAYSKDKAHLENTYM EEHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE INIKENASDVKKAIKKYGAVGIMYSHNDTGYHYINNSYNDKTNNRAGHAVMVVGWDDNYS EEECCCHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCC KDNFRDGVKPEKDGAWLIRNSWGDGTGSYYNQSYFWMSYETFSLSDTAWVFDFSANDGYD CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCC NNYQVDGGLNVAHQSSYRKLANVFTTQTKQGVSSEDLKAVSLSITSKTNVNYTIEIYTDL CCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEEECC KDKTKPTSGTKQETATTTGQTTYAGVYTIPLKSAVNLKPGTNYSVVVTTDTPAVDIEAAM CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCCCEEEEEECCCCCEEEEEEE TGDVNYNNEMVWENHASSDNTASYYFYGTGLAYSSSWNYQNVYGNFCIKAFTANNVEKDS ECCCCCCCCEEECCCCCCCCCEEEEEEECCEEEECCCCCCEECCCEEEEEEECCCCCCCH EKLVGRSLTLKDNIDMNYYMELPESIKSNSNAYMEFTVNNSQPYKVSVNDAIPVEKNGKV HHHHCCEEEEECCCCCEEEECCCHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCE IYKFACPLNAAQMSDTVKAKMVVDGNSGNEYTYSVKEYATELLSKSNEYPEETIKLVKAL EEEEECCCCHHHCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH LNYGTAAQSFFKYNTGKPANAILSDTDKIVAAADFAAYKAVIKTDSANSQSNGLTYYGSS HHCCHHHHHHHCCCCCCCCCHHHCCCCCEEEEHHHHHEEEEEEECCCCCCCCCEEEECCE LICKSEMTVRHYFMVNEGCDINNYKFSYVNAYGNEVSLTPKKASDGVYCVDINGIMARNL EEEECCCEEEEEEEEECCCCCCCEEEEEEEECCCEEEECCCCCCCCEEEEECCCEEEECC NSNYACKVTEKNKACILELDYGPFSYSQKVINSGNSSAELKNLVNALYWYWYYGYRN CCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECC >Mature Secondary Structure MKTKKFLSLVLSAAMILGVAVPVAAEPVSAGQGVEAEQQPIVENSITSGYILSDLDYNTP CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCC VYEPDESVPYSDDWGYSADETIESKYPANGVSDIKAKYPSVRNQNPLGTCWTFSSIGLAE CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCEE FDLINDGAFDKNIDLSELHLAYYAYNSLLDPLGGTVGDYAKYYMNNTSVQYGYLNRGGNY EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCCCE LMAARRMGQWCGPVSESDVPYSKVASNGYTASTIDTFLNTGLSDEYAYSKDKAHLENTYM EEHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE INIKENASDVKKAIKKYGAVGIMYSHNDTGYHYINNSYNDKTNNRAGHAVMVVGWDDNYS EEECCCHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCC KDNFRDGVKPEKDGAWLIRNSWGDGTGSYYNQSYFWMSYETFSLSDTAWVFDFSANDGYD CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCCCC NNYQVDGGLNVAHQSSYRKLANVFTTQTKQGVSSEDLKAVSLSITSKTNVNYTIEIYTDL CCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEEECC KDKTKPTSGTKQETATTTGQTTYAGVYTIPLKSAVNLKPGTNYSVVVTTDTPAVDIEAAM CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCCCEEEEEECCCCCEEEEEEE TGDVNYNNEMVWENHASSDNTASYYFYGTGLAYSSSWNYQNVYGNFCIKAFTANNVEKDS ECCCCCCCCEEECCCCCCCCCEEEEEEECCEEEECCCCCCEECCCEEEEEEECCCCCCCH EKLVGRSLTLKDNIDMNYYMELPESIKSNSNAYMEFTVNNSQPYKVSVNDAIPVEKNGKV HHHHCCEEEEECCCCCEEEECCCHHHCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCE IYKFACPLNAAQMSDTVKAKMVVDGNSGNEYTYSVKEYATELLSKSNEYPEETIKLVKAL EEEEECCCCHHHCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH LNYGTAAQSFFKYNTGKPANAILSDTDKIVAAADFAAYKAVIKTDSANSQSNGLTYYGSS HHCCHHHHHHHCCCCCCCCCHHHCCCCCEEEEHHHHHEEEEEEECCCCCCCCCEEEECCE LICKSEMTVRHYFMVNEGCDINNYKFSYVNAYGNEVSLTPKKASDGVYCVDINGIMARNL EEEECCCEEEEEEEEECCCCCCCEEEEEEEECCCEEEECCCCCCCCEEEEECCCEEEECC NSNYACKVTEKNKACILELDYGPFSYSQKVINSGNSSAELKNLVNALYWYWYYGYRN CCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA