| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925001
Identifier: 238925001
GI number: 238925001
Start: 2528514
End: 2529719
Strand: Reverse
Name: 238925001
Synonym: EUBREC_2652
Alternate gene names: NA
Gene position: 2529719-2528514 (Counterclockwise)
Preceding gene: 238925002
Following gene: 238925000
Centisome position: 73.33
GC content: 25.37
Gene sequence:
>1206_bases ATGAATATAGTTAATTATATAAAAGAAAAAGGACTGAAAAGAACTATTTTAGTTATATATCAATATAAAATTGATATTGT TATACAAAAAATGTTATATTTATTTCTAAAAAATAAAGAATTAAAAAATATAATAATAATAGAAAGCCATAATGATTTTG ATGCAGAAGGAGGCGCATTTTATGATTATTTAATAAAAAAAGGCTATAATGAAAAATATAAGATAATATGGTTATTAAAA CATAAAGTAAATAAAAAATTTAAATTACCATATAATGTTAGGTATTTTTATATATTTAAACCTAGTATAATGAAAGATTA CTATATTAATATAGCCAAAATATTTACAGCAGATAATTTTATTACTCCAAAGTTGCGAGATGAGCAAAAATCGTTTTTCT TTAGACATGGTGCGGGAGGTTTAAAAAATACTAAGGGTATAGGTAGAATTCCTAGCACAGTGGATTATATTTTGGGAATG TGTGAAGATTATTCAGATATAGAAAGAGATCAGCTTTCTATGTCTGAAAATGATAAAAGATTAGTATATTTGGGATTCCC TTCACATGATGTATTGTTGTCAGACAACCATGATGAATTGAAAAAGATTACAGATAATAAGTTTCGAAAAGTTGTCTTAT GGATGCCAACATTTCGAAAGGGAGGAGGATATAATAGAAATGATTCTGAGAGGGAACAGCCTTTAGGTATTCCATTAATT AATGATATAAAAGAGTATGAGAATTTAAATGAGTTACTTAATAATTCAAATGTTTTATTAATTATTAAAATTCATCCTAT GCAGAATTTAGAAGACCTAAAAATATATGATACGTCAAACATCAAAGTTTTAACAGGTGATAAAGTGAAACAAATTAGAG TAGATAATTATAGATTAATGAGTTGCTGTGATGCAATGATAAGTGATTATTCGGGAGCAGCATATGAATTTATTCAGTTA GACAGGCCATTAGCATATGTTTTATCAGATGTAAATGATTATAAATTAGGTTTTGTTGTTGATGATATTGAGCCTTTGAT AGCCGGTAAAGAAATATATAATTTTAAAGACCTTCAAGATTTTATTAATGATGTTGTTCTTGAAAAAGATGAATATAAAG AAAAACGAGAAAAATTGAGAAATATATTTTATAAATATCATGATACGAACAACTGTAAACGAATTGTTGAATTTATGGGA TTGTAA
Upstream 100 bases:
>100_bases TATGCTGATTAGATATGGATTTATTTTTTTAATAATGTTATTATGTTTTTGTAAAAAAAATCGAATAATTGAAATTATAA TTAAAATGAAAGGCTAAAGT
Downstream 100 bases:
>100_bases AAAGGAGAAATAGAAATGTTAAATTTTACAGTAGGACCAGTAATGTCTTCGGAAGAAGTAAGAGCTATAGGGGCAGAGCA GGTTCCCTATTTTAGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MNIVNYIKEKGLKRTILVIYQYKIDIVIQKMLYLFLKNKELKNIIIIESHNDFDAEGGAFYDYLIKKGYNEKYKIIWLLK HKVNKKFKLPYNVRYFYIFKPSIMKDYYINIAKIFTADNFITPKLRDEQKSFFFRHGAGGLKNTKGIGRIPSTVDYILGM CEDYSDIERDQLSMSENDKRLVYLGFPSHDVLLSDNHDELKKITDNKFRKVVLWMPTFRKGGGYNRNDSEREQPLGIPLI NDIKEYENLNELLNNSNVLLIIKIHPMQNLEDLKIYDTSNIKVLTGDKVKQIRVDNYRLMSCCDAMISDYSGAAYEFIQL DRPLAYVLSDVNDYKLGFVVDDIEPLIAGKEIYNFKDLQDFINDVVLEKDEYKEKREKLRNIFYKYHDTNNCKRIVEFMG L
Sequences:
>Translated_401_residues MNIVNYIKEKGLKRTILVIYQYKIDIVIQKMLYLFLKNKELKNIIIIESHNDFDAEGGAFYDYLIKKGYNEKYKIIWLLK HKVNKKFKLPYNVRYFYIFKPSIMKDYYINIAKIFTADNFITPKLRDEQKSFFFRHGAGGLKNTKGIGRIPSTVDYILGM CEDYSDIERDQLSMSENDKRLVYLGFPSHDVLLSDNHDELKKITDNKFRKVVLWMPTFRKGGGYNRNDSEREQPLGIPLI NDIKEYENLNELLNNSNVLLIIKIHPMQNLEDLKIYDTSNIKVLTGDKVKQIRVDNYRLMSCCDAMISDYSGAAYEFIQL DRPLAYVLSDVNDYKLGFVVDDIEPLIAGKEIYNFKDLQDFINDVVLEKDEYKEKREKLRNIFYKYHDTNNCKRIVEFMG L >Mature_401_residues MNIVNYIKEKGLKRTILVIYQYKIDIVIQKMLYLFLKNKELKNIIIIESHNDFDAEGGAFYDYLIKKGYNEKYKIIWLLK HKVNKKFKLPYNVRYFYIFKPSIMKDYYINIAKIFTADNFITPKLRDEQKSFFFRHGAGGLKNTKGIGRIPSTVDYILGM CEDYSDIERDQLSMSENDKRLVYLGFPSHDVLLSDNHDELKKITDNKFRKVVLWMPTFRKGGGYNRNDSEREQPLGIPLI NDIKEYENLNELLNNSNVLLIIKIHPMQNLEDLKIYDTSNIKVLTGDKVKQIRVDNYRLMSCCDAMISDYSGAAYEFIQL DRPLAYVLSDVNDYKLGFVVDDIEPLIAGKEIYNFKDLQDFINDVVLEKDEYKEKREKLRNIFYKYHDTNNCKRIVEFMG L
Specific function: Unknown
COG id: COG1887
COG function: function code M; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47398; Mature: 47398
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVNYIKEKGLKRTILVIYQYKIDIVIQKMLYLFLKNKELKNIIIIESHNDFDAEGGAF CCHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHH YDYLIKKGYNEKYKIIWLLKHKVNKKFKLPYNVRYFYIFKPSIMKDYYINIAKIFTADNF HHHHHHCCCCCCEEEEEEEEECCCCEEECCEEEEEEEEECCCHHHHHHHEEEEEEECCCE ITPKLRDEQKSFFFRHGAGGLKNTKGIGRIPSTVDYILGMCEDYSDIERDQLSMSENDKR ECCCCCCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCE LVYLGFPSHDVLLSDNHDELKKITDNKFRKVVLWMPTFRKGGGYNRNDSEREQPLGIPLI EEEEECCCCCEEEECCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH NDIKEYENLNELLNNSNVLLIIKIHPMQNLEDLKIYDTSNIKVLTGDKVKQIRVDNYRLM HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCEEEEECCCEEEEEECCCHHH SCCDAMISDYSGAAYEFIQLDRPLAYVLSDVNDYKLGFVVDDIEPLIAGKEIYNFKDLQD HHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCHHHHCCCHHCCHHHHHH FINDVVLEKDEYKEKREKLRNIFYKYHDTNNCKRIVEFMGL HHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCC >Mature Secondary Structure MNIVNYIKEKGLKRTILVIYQYKIDIVIQKMLYLFLKNKELKNIIIIESHNDFDAEGGAF CCHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHH YDYLIKKGYNEKYKIIWLLKHKVNKKFKLPYNVRYFYIFKPSIMKDYYINIAKIFTADNF HHHHHHCCCCCCEEEEEEEEECCCCEEECCEEEEEEEEECCCHHHHHHHEEEEEEECCCE ITPKLRDEQKSFFFRHGAGGLKNTKGIGRIPSTVDYILGMCEDYSDIERDQLSMSENDKR ECCCCCCCHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCE LVYLGFPSHDVLLSDNHDELKKITDNKFRKVVLWMPTFRKGGGYNRNDSEREQPLGIPLI EEEEECCCCCEEEECCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH NDIKEYENLNELLNNSNVLLIIKIHPMQNLEDLKIYDTSNIKVLTGDKVKQIRVDNYRLM HHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCEEEEECCCEEEEEECCCHHH SCCDAMISDYSGAAYEFIQLDRPLAYVLSDVNDYKLGFVVDDIEPLIAGKEIYNFKDLQD HHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCCCEEEEEECCCHHHHCCCHHCCHHHHHH FINDVVLEKDEYKEKREKLRNIFYKYHDTNNCKRIVEFMGL HHHHHHCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA