| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238924976
Identifier: 238924976
GI number: 238924976
Start: 2506487
End: 2507677
Strand: Reverse
Name: 238924976
Synonym: EUBREC_2627
Alternate gene names: NA
Gene position: 2507677-2506487 (Counterclockwise)
Preceding gene: 238924977
Following gene: 238924975
Centisome position: 72.69
GC content: 31.82
Gene sequence:
>1191_bases ATGACTATGGATTTGTCAGAGAAAATAGAAAAAAAAGAACTTATATGTCTGGCAGGAATATTTATATTTGTTTTCGCTAT GCTTATGGATCATACATATGTTGTTGCAATGGATGATGCTGCTACATTGAGAAGTATTGGAACATATAGTAAATATCTGG CATATTTTCTTTTATGTATAAAAATATTATGGGATCAGTATGATAATAGGAATATAATATCTGCTATAGCATATATGGGG ATATTTGTGATAGCTGCTTTATTTGCCGGAGAATTTAATTTTTGCTTATTCTTTCTGATATATGTTGCAACAATAGGCTG TGATGGCAAACGTATAATTTCAGTTAGTATATTTGCTCAGGCTATTATCTTAATTGGATCAATTGTAGCTGCTTTAACCG GTTATGTACCTAATTATGATTTTTCGGAACTTACCAGAAAGCGTATGGGCATGGGATTTGCGTGGTGTACAACAGCACCT ATAGTCTTTTACTTTATAGCACTTGGGTATATATATATCAGGGGAAGAAAATTTAAATGGTACGAAGCTGTTATGTTGGA GGTAATAAACTATCTGATTTATACTCAGACGAATACACGCATGACTTTTTACGTTTCTACAATTTTTCTCTTGTTTTTTG CAATTCAAAGTTTATGGGATAATCCGTGGAGAATAATGCATGTGTTTAAATGGTTGTGGATTATGATGCCGTTTATATGT GCTTTGATTTCAATAGGCACAACAATAATGTTTGATGAGGATTCTACAATATGGCTTAAAGCGAACGCATTTTTAAGCGG ACGATTAAACTTGGGATTTGATGCTATTAAAGAATATGGATTTACATTATTTGGACAGCCTATAGAGTGGGTTGGATCCA GTACATTAAACACATCTTTATATGGATACAATTATGTTGACTGTTCTTATTTACAGATTGCTTTAAGTTATGGAATTATA GCTTTGATAGCAATTTTAACTATATATTCTATAGCTATATATAGGGCATGTATAGCGGATGACTATTGGCTGGTATTTGT TTTGATATTTGTTTTAATACATTCATTGACCGAGCCGAGGTTATATAATTTTGCGTTTAATACATTGTCTTTTGTTGCAT TTGCTAAAATTAATTGTGATAGAAATAAGGAACGTGGAAGAAATGATATCATTTATAATTCCGGCGCATAA
Upstream 100 bases:
>100_bases ATATTTTTGAAACAGGTGTTGTAAATACAGAGGAAAAGTGGAGTTTTAAGAAACGTTTTTTGACAGGGATTAAGCGTGTG ATAAATTATTATTTAAAAGG
Downstream 100 bases:
>100_bases CGCGACGGCATATTTAAAAAGGGCTATTGAAAGCATAGAAAGTGATGCGAATGCGTGCGGGGGACAAAAAAAGATAGAGA TAATTATCGTGGAGAATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Oligosaccharide Repeat Unit Polymerase Wzy
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTMDLSEKIEKKELICLAGIFIFVFAMLMDHTYVVAMDDAATLRSIGTYSKYLAYFLLCIKILWDQYDNRNIISAIAYMG IFVIAALFAGEFNFCLFFLIYVATIGCDGKRIISVSIFAQAIILIGSIVAALTGYVPNYDFSELTRKRMGMGFAWCTTAP IVFYFIALGYIYIRGRKFKWYEAVMLEVINYLIYTQTNTRMTFYVSTIFLLFFAIQSLWDNPWRIMHVFKWLWIMMPFIC ALISIGTTIMFDEDSTIWLKANAFLSGRLNLGFDAIKEYGFTLFGQPIEWVGSSTLNTSLYGYNYVDCSYLQIALSYGII ALIAILTIYSIAIYRACIADDYWLVFVLIFVLIHSLTEPRLYNFAFNTLSFVAFAKINCDRNKERGRNDIIYNSGA
Sequences:
>Translated_396_residues MTMDLSEKIEKKELICLAGIFIFVFAMLMDHTYVVAMDDAATLRSIGTYSKYLAYFLLCIKILWDQYDNRNIISAIAYMG IFVIAALFAGEFNFCLFFLIYVATIGCDGKRIISVSIFAQAIILIGSIVAALTGYVPNYDFSELTRKRMGMGFAWCTTAP IVFYFIALGYIYIRGRKFKWYEAVMLEVINYLIYTQTNTRMTFYVSTIFLLFFAIQSLWDNPWRIMHVFKWLWIMMPFIC ALISIGTTIMFDEDSTIWLKANAFLSGRLNLGFDAIKEYGFTLFGQPIEWVGSSTLNTSLYGYNYVDCSYLQIALSYGII ALIAILTIYSIAIYRACIADDYWLVFVLIFVLIHSLTEPRLYNFAFNTLSFVAFAKINCDRNKERGRNDIIYNSGA >Mature_395_residues TMDLSEKIEKKELICLAGIFIFVFAMLMDHTYVVAMDDAATLRSIGTYSKYLAYFLLCIKILWDQYDNRNIISAIAYMGI FVIAALFAGEFNFCLFFLIYVATIGCDGKRIISVSIFAQAIILIGSIVAALTGYVPNYDFSELTRKRMGMGFAWCTTAPI VFYFIALGYIYIRGRKFKWYEAVMLEVINYLIYTQTNTRMTFYVSTIFLLFFAIQSLWDNPWRIMHVFKWLWIMMPFICA LISIGTTIMFDEDSTIWLKANAFLSGRLNLGFDAIKEYGFTLFGQPIEWVGSSTLNTSLYGYNYVDCSYLQIALSYGIIA LIAILTIYSIAIYRACIADDYWLVFVLIFVLIHSLTEPRLYNFAFNTLSFVAFAKINCDRNKERGRNDIIYNSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45532; Mature: 45401
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMDLSEKIEKKELICLAGIFIFVFAMLMDHTYVVAMDDAATLRSIGTYSKYLAYFLLCI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH KILWDQYDNRNIISAIAYMGIFVIAALFAGEFNFCLFFLIYVATIGCDGKRIISVSIFAQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHH AIILIGSIVAALTGYVPNYDFSELTRKRMGMGFAWCTTAPIVFYFIALGYIYIRGRKFKW HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCHH YEAVMLEVINYLIYTQTNTRMTFYVSTIFLLFFAIQSLWDNPWRIMHVFKWLWIMMPFIC HHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ALISIGTTIMFDEDSTIWLKANAFLSGRLNLGFDAIKEYGFTLFGQPIEWVGSSTLNTSL HHHHHCCEEEEECCCEEEEEECEEEECCCCCCHHHHHHCCCEECCCCHHHHCCCCCCCCC YGYNYVDCSYLQIALSYGIIALIAILTIYSIAIYRACIADDYWLVFVLIFVLIHSLTEPR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH LYNFAFNTLSFVAFAKINCDRNKERGRNDIIYNSGA HHHHHHHHHHHHHHHEECCCCCCCCCCCCCEECCCC >Mature Secondary Structure TMDLSEKIEKKELICLAGIFIFVFAMLMDHTYVVAMDDAATLRSIGTYSKYLAYFLLCI CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH KILWDQYDNRNIISAIAYMGIFVIAALFAGEFNFCLFFLIYVATIGCDGKRIISVSIFAQ HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEHHHHHHH AIILIGSIVAALTGYVPNYDFSELTRKRMGMGFAWCTTAPIVFYFIALGYIYIRGRKFKW HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCHH YEAVMLEVINYLIYTQTNTRMTFYVSTIFLLFFAIQSLWDNPWRIMHVFKWLWIMMPFIC HHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ALISIGTTIMFDEDSTIWLKANAFLSGRLNLGFDAIKEYGFTLFGQPIEWVGSSTLNTSL HHHHHCCEEEEECCCEEEEEECEEEECCCCCCHHHHHHCCCEECCCCHHHHCCCCCCCCC YGYNYVDCSYLQIALSYGIIALIAILTIYSIAIYRACIADDYWLVFVLIFVLIHSLTEPR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH LYNFAFNTLSFVAFAKINCDRNKERGRNDIIYNSGA HHHHHHHHHHHHHHHEECCCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA