| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238924924
Identifier: 238924924
GI number: 238924924
Start: 2448032
End: 2449402
Strand: Reverse
Name: 238924924
Synonym: EUBREC_2575
Alternate gene names: NA
Gene position: 2449402-2448032 (Counterclockwise)
Preceding gene: 238924925
Following gene: 238924923
Centisome position: 71.0
GC content: 41.72
Gene sequence:
>1371_bases ATGATTTGTTATAAATGCGGACAAGATGCAGGCTGGAACGATAAATGCCCTGTATGTGGGGCTGATCTTTCACTTTTTAA AAGAGCTATTAGAATATCCAACTCATACTACAATGATGGTTTACAAAAGGCACAGGTGAGAAATCTGTCCGGAGCGATTA TCTCTCTCAGGCAGAGTCTTAAGTTTTATAAGTACAATATCCAGGCAAGGAATCTGTTAGGTCTCATATACTATGAGATG GGTGAGATGGTTGACGCCTTAAGTGAGTGGGTCATCAGTGCAAACTATCAGCCTGATGATAATCTGGCAAAGAAGTATAT AGATCAGATTCATAATAACAGAAATCAGCTCGAAACAATCAATCAGACCATTAAAAAATATAATCAGGCTTTAACTTATT GCAAGCAGGACAGTAAGGACCTTGCGGTTATACAGCTTCGAAAGGTGTTATCCTTAAATCCAAAGCTTGTAAAGGGACAT CAGCTTTTGGCTCTTTTATATCTGGAGGAGGGGCATCTGGATAAGGCAAAGAAAGCCTTACGCGATGCAGGCAAGATAGA TACAGACAATACCACTACCCTCAGATACTTAAAAGAAGTGAACAGGCGTCTCAAGGAAAAAGGAACTGAGAGGAAAAAGA AAAATGATGATTTAATTTCCTACCAGAGTGGAAACGAAACAATCATTATGCCAAAGCGATTCAGGGAGAGCTCAATGTGG GCAAATATACTCTATATTATAATCGGTCTGGTAGTCGGAGTGGCGGTTACGTGCTTCCTTGTGGTTCCGGGCATAAAAAG CCAGGCGAAAACAGATGCAAAGAAGCAGCTATTATCGGCCAATGATACGATTTCCACAAATGGGCAGACCATCAGTGGAC TTAATGATCAGATAGACAAGCTAAAGAAGGAGCTTGAGGACGAGAAGAAGAAAAATGATGGAGTATCAGACCAGATTTCC ACATATGAGGCTTTGCTCAATGCCTATGTATACTATACAACCAATGATGTAATAAAGGCAGGAGAAGCACTTGAAAATAT CAACACAAGCTACCTGAGTGACTCGGCTAAGCAGACATATGATACGCTCAATGGTTCAATTGCAGATTCATATAAGGAAG CACTGTACAGTCAGGCATACTCATCATACAGCAGTGGCGATTATCAGAGTGCAATCCCTACATTCCAGAAGCTTGTCGGC ATGGATGAGGCATACAGGGATGGTTCAGCTGCATATTACCTGGCGCAGTCGTTCAGGAAGTCAGGTGACTTAGCATCTGC AAAGCCATATTATCAGTATGTGGTAGACAACTACGCAGGCACTGAGAAGGCCAGAACATCAAAGAATTATCTGGCACAGG AACAGCAGTAA
Upstream 100 bases:
>100_bases AGGAGGCTGAATCTGCGATTTACAGCCACGATCTGACAGATGTCACAGATATCATTGCACAGTTATTACGTGAGCAGGAC AAAAGGCAGGGTGAATTAAG
Downstream 100 bases:
>100_bases AACAACTGCTGCGAGGCAATAATTAAATATAGAATTACGAAAGACACCAGATAATCTCCGGTGTCTTTTTTATATGAGCA GGAAAGGAAGAGTGTGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MICYKCGQDAGWNDKCPVCGADLSLFKRAIRISNSYYNDGLQKAQVRNLSGAIISLRQSLKFYKYNIQARNLLGLIYYEM GEMVDALSEWVISANYQPDDNLAKKYIDQIHNNRNQLETINQTIKKYNQALTYCKQDSKDLAVIQLRKVLSLNPKLVKGH QLLALLYLEEGHLDKAKKALRDAGKIDTDNTTTLRYLKEVNRRLKEKGTERKKKNDDLISYQSGNETIIMPKRFRESSMW ANILYIIIGLVVGVAVTCFLVVPGIKSQAKTDAKKQLLSANDTISTNGQTISGLNDQIDKLKKELEDEKKKNDGVSDQIS TYEALLNAYVYYTTNDVIKAGEALENINTSYLSDSAKQTYDTLNGSIADSYKEALYSQAYSSYSSGDYQSAIPTFQKLVG MDEAYRDGSAAYYLAQSFRKSGDLASAKPYYQYVVDNYAGTEKARTSKNYLAQEQQ
Sequences:
>Translated_456_residues MICYKCGQDAGWNDKCPVCGADLSLFKRAIRISNSYYNDGLQKAQVRNLSGAIISLRQSLKFYKYNIQARNLLGLIYYEM GEMVDALSEWVISANYQPDDNLAKKYIDQIHNNRNQLETINQTIKKYNQALTYCKQDSKDLAVIQLRKVLSLNPKLVKGH QLLALLYLEEGHLDKAKKALRDAGKIDTDNTTTLRYLKEVNRRLKEKGTERKKKNDDLISYQSGNETIIMPKRFRESSMW ANILYIIIGLVVGVAVTCFLVVPGIKSQAKTDAKKQLLSANDTISTNGQTISGLNDQIDKLKKELEDEKKKNDGVSDQIS TYEALLNAYVYYTTNDVIKAGEALENINTSYLSDSAKQTYDTLNGSIADSYKEALYSQAYSSYSSGDYQSAIPTFQKLVG MDEAYRDGSAAYYLAQSFRKSGDLASAKPYYQYVVDNYAGTEKARTSKNYLAQEQQ >Mature_456_residues MICYKCGQDAGWNDKCPVCGADLSLFKRAIRISNSYYNDGLQKAQVRNLSGAIISLRQSLKFYKYNIQARNLLGLIYYEM GEMVDALSEWVISANYQPDDNLAKKYIDQIHNNRNQLETINQTIKKYNQALTYCKQDSKDLAVIQLRKVLSLNPKLVKGH QLLALLYLEEGHLDKAKKALRDAGKIDTDNTTTLRYLKEVNRRLKEKGTERKKKNDDLISYQSGNETIIMPKRFRESSMW ANILYIIIGLVVGVAVTCFLVVPGIKSQAKTDAKKQLLSANDTISTNGQTISGLNDQIDKLKKELEDEKKKNDGVSDQIS TYEALLNAYVYYTTNDVIKAGEALENINTSYLSDSAKQTYDTLNGSIADSYKEALYSQAYSSYSSGDYQSAIPTFQKLVG MDEAYRDGSAAYYLAQSFRKSGDLASAKPYYQYVVDNYAGTEKARTSKNYLAQEQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51489; Mature: 51489
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICYKCGQDAGWNDKCPVCGADLSLFKRAIRISNSYYNDGLQKAQVRNLSGAIISLRQSL CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHH KFYKYNIQARNLLGLIYYEMGEMVDALSEWVISANYQPDDNLAKKYIDQIHNNRNQLETI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHH NQTIKKYNQALTYCKQDSKDLAVIQLRKVLSLNPKLVKGHQLLALLYLEEGHLDKAKKAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHEEEEEEECCCCHHHHHHHH RDAGKIDTDNTTTLRYLKEVNRRLKEKGTERKKKNDDLISYQSGNETIIMPKRFRESSMW HHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEECCCCCEEECCHHHHHHHHH ANILYIIIGLVVGVAVTCFLVVPGIKSQAKTDAKKQLLSANDTISTNGQTISGLNDQIDK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHH LKKELEDEKKKNDGVSDQISTYEALLNAYVYYTTNDVIKAGEALENINTSYLSDSAKQTY HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHH DTLNGSIADSYKEALYSQAYSSYSSGDYQSAIPTFQKLVGMDEAYRDGSAAYYLAQSFRK HHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH SGDLASAKPYYQYVVDNYAGTEKARTSKNYLAQEQQ CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MICYKCGQDAGWNDKCPVCGADLSLFKRAIRISNSYYNDGLQKAQVRNLSGAIISLRQSL CCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHH KFYKYNIQARNLLGLIYYEMGEMVDALSEWVISANYQPDDNLAKKYIDQIHNNRNQLETI HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHH NQTIKKYNQALTYCKQDSKDLAVIQLRKVLSLNPKLVKGHQLLALLYLEEGHLDKAKKAL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHEEEEEEECCCCHHHHHHHH RDAGKIDTDNTTTLRYLKEVNRRLKEKGTERKKKNDDLISYQSGNETIIMPKRFRESSMW HHCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEECCCCCEEECCHHHHHHHHH ANILYIIIGLVVGVAVTCFLVVPGIKSQAKTDAKKQLLSANDTISTNGQTISGLNDQIDK HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHH LKKELEDEKKKNDGVSDQISTYEALLNAYVYYTTNDVIKAGEALENINTSYLSDSAKQTY HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHH DTLNGSIADSYKEALYSQAYSSYSSGDYQSAIPTFQKLVGMDEAYRDGSAAYYLAQSFRK HHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHH SGDLASAKPYYQYVVDNYAGTEKARTSKNYLAQEQQ CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA