| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yihX [C]
Identifier: 238924919
GI number: 238924919
Start: 2444971
End: 2445729
Strand: Reverse
Name: yihX [C]
Synonym: EUBREC_2570
Alternate gene names: 238924919
Gene position: 2445729-2444971 (Counterclockwise)
Preceding gene: 238924921
Following gene: 238924918
Centisome position: 70.9
GC content: 40.05
Gene sequence:
>759_bases ATGAAACTTCCACTCACATATGATAACTATATATTTGACCTCTACGGTACGCTCGTGGATATTCACACAGACGAGAGTGA CACTGCAATCTGGGAAAAGCTCGCCATGTTCTATGGCTATTACGGAGCACTGTATGAGGCAAAGGAGCTTAAGGAGCGCT ATGAGACACTTGTAAAGAGCAGCGAGGCAGAGCTGAAGAAGAAAATTGAAAAGTCTGATGCAGATGCGCGGTTTGCCATC TCATATGCCCATGAAGCATCACCGGAGATACATATAGAGGATGTATTTGAAAAGCTTTATGAGGAAAAGGGCGTGAATCC GACAAAGGAGCTTCCAGTGCATACAGGCCAGTTTTTCAGGGTGATGAGCACCGAATACGTAAAGCTTTATCCGGGCACAA AGGAGATGCTTAAGGAACTTAAGAATGCGGGTAAGAATGTATATCTGCTTTCAAATGCGCAGCGTATATTTACAGCCTAT GAGATGAGAAGACTTGATATCTTTGATTTGTTTGATGACGTATTTATCTCATCTGATTATAATACCAAAAAGCCTGATAT CAGATTTTATAAGGAGCTGATAAATAAGTATGATATTGACGTATCAAAATCGCTTTTTATAGGAAATGATTCGACTACCG ATATCAAGGGTGCAAAGGAATGCCGGATGGATGCCTTTTATGTGAAATCGAATATTTCACCAAAGGATGATATGGCTCAT GATGCAGACTATATTATAGATAATTTTACCAACTGGTAA
Upstream 100 bases:
>100_bases TTGGAAACTATTGAAAAAAGAAAACTACTTGCACCCAAGCCGCAAAGCATATTACAATGGGTGGTAAGGAATATAATAGG ATTGTCGAAAGGAGAAAAGC
Downstream 100 bases:
>100_bases TGCATTATTGTTTATAAAAATGTAAATATTACATAAAAAACATATATAAATTAAAATCTTTTTATAAACGGTTGCAAATA AAAAATAATGGTGTAAAATG
Product: haloacid dehalogenase-like hydrolase
Products: NA
Alternate protein names: HAD Family Hydrolase; Haloacid Dehalogenase; HAD-Superfamily Hydrolase / Phosphatase; HAD Superfamily Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase Family Protein; Haloacid Dehalogenase Domain Protein Hydrolase
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKLPLTYDNYIFDLYGTLVDIHTDESDTAIWEKLAMFYGYYGALYEAKELKERYETLVKSSEAELKKKIEKSDADARFAI SYAHEASPEIHIEDVFEKLYEEKGVNPTKELPVHTGQFFRVMSTEYVKLYPGTKEMLKELKNAGKNVYLLSNAQRIFTAY EMRRLDIFDLFDDVFISSDYNTKKPDIRFYKELINKYDIDVSKSLFIGNDSTTDIKGAKECRMDAFYVKSNISPKDDMAH DADYIIDNFTNW
Sequences:
>Translated_252_residues MKLPLTYDNYIFDLYGTLVDIHTDESDTAIWEKLAMFYGYYGALYEAKELKERYETLVKSSEAELKKKIEKSDADARFAI SYAHEASPEIHIEDVFEKLYEEKGVNPTKELPVHTGQFFRVMSTEYVKLYPGTKEMLKELKNAGKNVYLLSNAQRIFTAY EMRRLDIFDLFDDVFISSDYNTKKPDIRFYKELINKYDIDVSKSLFIGNDSTTDIKGAKECRMDAFYVKSNISPKDDMAH DADYIIDNFTNW >Mature_252_residues MKLPLTYDNYIFDLYGTLVDIHTDESDTAIWEKLAMFYGYYGALYEAKELKERYETLVKSSEAELKKKIEKSDADARFAI SYAHEASPEIHIEDVFEKLYEEKGVNPTKELPVHTGQFFRVMSTEYVKLYPGTKEMLKELKNAGKNVYLLSNAQRIFTAY EMRRLDIFDLFDDVFISSDYNTKKPDIRFYKELINKYDIDVSKSLFIGNDSTTDIKGAKECRMDAFYVKSNISPKDDMAH DADYIIDNFTNW
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29469; Mature: 29469
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPLTYDNYIFDLYGTLVDIHTDESDTAIWEKLAMFYGYYGALYEAKELKERYETLVKS CCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEAELKKKIEKSDADARFAISYAHEASPEIHIEDVFEKLYEEKGVNPTKELPVHTGQFFR CHHHHHHHHHHCCCCCEEEEEEHHCCCCCEEHHHHHHHHHHHCCCCCCHHCCCCCCHHHH VMSTEYVKLYPGTKEMLKELKNAGKNVYLLSNAQRIFTAYEMRRLDIFDLFDDVFISSDY HHCCCEEEECCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC NTKKPDIRFYKELINKYDIDVSKSLFIGNDSTTDIKGAKECRMDAFYVKSNISPKDDMAH CCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCC DADYIIDNFTNW CHHHHHHCCCCC >Mature Secondary Structure MKLPLTYDNYIFDLYGTLVDIHTDESDTAIWEKLAMFYGYYGALYEAKELKERYETLVKS CCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEAELKKKIEKSDADARFAISYAHEASPEIHIEDVFEKLYEEKGVNPTKELPVHTGQFFR CHHHHHHHHHHCCCCCEEEEEEHHCCCCCEEHHHHHHHHHHHCCCCCCHHCCCCCCHHHH VMSTEYVKLYPGTKEMLKELKNAGKNVYLLSNAQRIFTAYEMRRLDIFDLFDDVFISSDY HHCCCEEEECCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCC NTKKPDIRFYKELINKYDIDVSKSLFIGNDSTTDIKGAKECRMDAFYVKSNISPKDDMAH CCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHEEEECCCCCCCCCCC DADYIIDNFTNW CHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA