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The map label for this gene is 238924904

Identifier: 238924904

GI number: 238924904

Start: 2427069

End: 2428157

Strand: Reverse

Name: 238924904

Synonym: EUBREC_2555

Alternate gene names: NA

Gene position: 2428157-2427069 (Counterclockwise)

Preceding gene: 238924905

Following gene: 238924903

Centisome position: 70.39

GC content: 45.55

Gene sequence:

>1089_bases
ATGGAGCTTGGAAAAGAATATTTTGGACCGCTTTGGAGCTTTGTAGCCAGCAACGAGATAACGGATATAGATTATAACGG
CAAAGAAATATGGCTTACAAATATATTTAATGAGCGTTTCAGGGCCAATCAGCAGTTTGTCACACAGTATATGACACCTG
CTTTTGTGGAGCAGTTTACACAGCGCATCGCCAATGTCGTAAGCAGACAGTTCAATAAGAGAAATCCGGAGCTTGAGGCC
GAGACGAGCGAGCTTCGTGTGACGATACTGCATGAATCGGTTGCGAAGTCGGGCAGGAGCATCAGCATACGAAAGACACC
GCCGCTTATCAGACTGACAGCAGAATCTGCAATTGCTGAGAAATTCTGCTCGGAGGAGCTTTTAGCTGTACTGATAAACT
GCGTAAAGACCAAGATGAATATCACCTTTTGCGGGATGCCGGGCATCGGAAAGACGGAGTGCGTGAAGTTTTTTTCACAG
TTTATACCGGCGAATGAGCGCGTGATTACAATTGAGGATACTCTTGAGATACGTTATGCCGAGACAAATCCGGGCAAGGA
CTGTATAGAGATGAAGGTGAGTGAGGATGTGTTTGGCTACTCTGAGGCTATCAAGTCATGTCTTAGAATGAATCCAAAGT
GGATTATGCTCTCAGAGGCACGCTCAAAGGAGGTAAAATATCTGCTGCAGAGCTGGAGCACCGGTGTGCGTGGCATGACG
ACACTCCACACAGATGATGTGCGCAATATACCGGACAGAATACTCAATATGCTAGAGAGCCGTGTGGATGCAGAGCGTAT
GGAGAATGACATATATCAGGCACTTGATGTGGGAATTTTGATCCGCAAGAGAAGAAATGAAGACGGAGTAGTGTACAGAT
ACATAGATCAGGTGTGCTTTTTCTACAGGGAAAACTATACCAATCATGTGTTTATGCTTGTATCAGACGGACAGATAGTG
ACTCACGATATACCAAAGGTCATACTTCGCAGATTTAAAAGAGAGGGTGTGAATGAGCCGTTTGGCGAGTCCTTTGTCAA
TGAGATAAGGATGAATGAGGCCATGATGAGTGAGGAGAGGGAGGCTTAG

Upstream 100 bases:

>100_bases
ATAGGCTCTGATGCAACAGGCATAGTAGGAAAGACATTTAGTGATCTGATTATAAACTTTTCAAATCATGCCAATATGAG
TGTCAAATAAGAGGTGGTAC

Downstream 100 bases:

>100_bases
GAATGACGTATATATTGATTTTTTTTCTGACATATGTGCTGCATCTTCTGCTCAAGTTAAACTGGGTGTGTACAGCTGTG
GTACTTGTTTTTCTTCTTGT

Product: component of type IV pilus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MELGKEYFGPLWSFVASNEITDIDYNGKEIWLTNIFNERFRANQQFVTQYMTPAFVEQFTQRIANVVSRQFNKRNPELEA
ETSELRVTILHESVAKSGRSISIRKTPPLIRLTAESAIAEKFCSEELLAVLINCVKTKMNITFCGMPGIGKTECVKFFSQ
FIPANERVITIEDTLEIRYAETNPGKDCIEMKVSEDVFGYSEAIKSCLRMNPKWIMLSEARSKEVKYLLQSWSTGVRGMT
TLHTDDVRNIPDRILNMLESRVDAERMENDIYQALDVGILIRKRRNEDGVVYRYIDQVCFFYRENYTNHVFMLVSDGQIV
THDIPKVILRRFKREGVNEPFGESFVNEIRMNEAMMSEEREA

Sequences:

>Translated_362_residues
MELGKEYFGPLWSFVASNEITDIDYNGKEIWLTNIFNERFRANQQFVTQYMTPAFVEQFTQRIANVVSRQFNKRNPELEA
ETSELRVTILHESVAKSGRSISIRKTPPLIRLTAESAIAEKFCSEELLAVLINCVKTKMNITFCGMPGIGKTECVKFFSQ
FIPANERVITIEDTLEIRYAETNPGKDCIEMKVSEDVFGYSEAIKSCLRMNPKWIMLSEARSKEVKYLLQSWSTGVRGMT
TLHTDDVRNIPDRILNMLESRVDAERMENDIYQALDVGILIRKRRNEDGVVYRYIDQVCFFYRENYTNHVFMLVSDGQIV
THDIPKVILRRFKREGVNEPFGESFVNEIRMNEAMMSEEREA
>Mature_362_residues
MELGKEYFGPLWSFVASNEITDIDYNGKEIWLTNIFNERFRANQQFVTQYMTPAFVEQFTQRIANVVSRQFNKRNPELEA
ETSELRVTILHESVAKSGRSISIRKTPPLIRLTAESAIAEKFCSEELLAVLINCVKTKMNITFCGMPGIGKTECVKFFSQ
FIPANERVITIEDTLEIRYAETNPGKDCIEMKVSEDVFGYSEAIKSCLRMNPKWIMLSEARSKEVKYLLQSWSTGVRGMT
TLHTDDVRNIPDRILNMLESRVDAERMENDIYQALDVGILIRKRRNEDGVVYRYIDQVCFFYRENYTNHVFMLVSDGQIV
THDIPKVILRRFKREGVNEPFGESFVNEIRMNEAMMSEEREA

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002078
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 42041; Mature: 42041

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELGKEYFGPLWSFVASNEITDIDYNGKEIWLTNIFNERFRANQQFVTQYMTPAFVEQFT
CCCCHHHHHHHHHHHHCCCCEECCCCCCEEEEEHHHHHHHHCCHHHHHHHCCHHHHHHHH
QRIANVVSRQFNKRNPELEAETSELRVTILHESVAKSGRSISIRKTPPLIRLTAESAIAE
HHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEHHHHCCCCEEEEECCCCEEEEEHHHHHHH
KFCSEELLAVLINCVKTKMNITFCGMPGIGKTECVKFFSQFIPANERVITIEDTLEIRYA
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEE
ETNPGKDCIEMKVSEDVFGYSEAIKSCLRMNPKWIMLSEARSKEVKYLLQSWSTGVRGMT
CCCCCCHHHHEEHHHHHCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCE
TLHTDDVRNIPDRILNMLESRVDAERMENDIYQALDVGILIRKRRNEDGVVYRYIDQVCF
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
FYRENYTNHVFMLVSDGQIVTHDIPKVILRRFKREGVNEPFGESFVNEIRMNEAMMSEER
HHHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
EA
CC
>Mature Secondary Structure
MELGKEYFGPLWSFVASNEITDIDYNGKEIWLTNIFNERFRANQQFVTQYMTPAFVEQFT
CCCCHHHHHHHHHHHHCCCCEECCCCCCEEEEEHHHHHHHHCCHHHHHHHCCHHHHHHHH
QRIANVVSRQFNKRNPELEAETSELRVTILHESVAKSGRSISIRKTPPLIRLTAESAIAE
HHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEHHHHCCCCEEEEECCCCEEEEEHHHHHHH
KFCSEELLAVLINCVKTKMNITFCGMPGIGKTECVKFFSQFIPANERVITIEDTLEIRYA
HHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEEE
ETNPGKDCIEMKVSEDVFGYSEAIKSCLRMNPKWIMLSEARSKEVKYLLQSWSTGVRGMT
CCCCCCHHHHEEHHHHHCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCE
TLHTDDVRNIPDRILNMLESRVDAERMENDIYQALDVGILIRKRRNEDGVVYRYIDQVCF
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
FYRENYTNHVFMLVSDGQIVTHDIPKVILRRFKREGVNEPFGESFVNEIRMNEAMMSEER
HHHHCCCCEEEEEEECCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
EA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10475962; 12004073 [H]