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The map label for this gene is 238924886

Identifier: 238924886

GI number: 238924886

Start: 2409466

End: 2410086

Strand: Reverse

Name: 238924886

Synonym: EUBREC_2537

Alternate gene names: NA

Gene position: 2410086-2409466 (Counterclockwise)

Preceding gene: 238924888

Following gene: 238924885

Centisome position: 69.86

GC content: 45.73

Gene sequence:

>621_bases
ATGGCAGATAAAATGTTTGAAAACAACCAGGTATCAATAATCGGAGAAATCGTTTCAGATTTTCAGTTTAGTCACGAGGT
GTATGGTGAAGGCTTCTATATGATGGAGGTTTCGGTCAGAAGGCTTTCAGATTGCATGGACTATATTCCGGTGATGGTGT
CAGAGAGGCTTATCAATGTGGAGGGTGACTACATAGGCAAAAGCGTATATATAGGCGGGCAGTTCCGCTCATTCAACAGG
CATGAGGAGAAGAAGAACAGGCTGGTGCTGTCTGTTTTTGCAAGAGAGCTTGAGGTATTGGACAGTGATTATGATGAGGA
TGCAGCCAATCAGATTTTCCTTGACGGCTATATCTGCAAGGAGGCTATATACAGGAAAACACCGCTTGGACGAGAAATTG
CAGACCTGCTTGTGGCAGTGAACCGTTCATATGGCAAGTCAGACTATATTCCATGTATCTGTTGGGGAAGAAATGCCAGA
TTTGCGTCGACCTTTGAGGTGGGTACACATGTGCAGATATGGGGTAGAATCCAGAGCAGAGACTATGTGAAAAAGCTCAG
TGAGACACAGGTGGAGCAGCGCACGGCGTATGAGGTTTCCGTGAGCAAGATTGAGGCATAG

Upstream 100 bases:

>100_bases
TGTTATTGGATTTGTCGACATTATTTGAGAAAATATACTTTGTGGAAATGTTAAAAATAGCTGGAAAAACATTTTACAAA
AGGAAGGGAGACAAAAATTC

Downstream 100 bases:

>100_bases
TACTTTAAATGGATAGTAACTACAGATTTGTGATTTTCCCGAAAATTTGCAATAATAGTCAGATTGTGGTATTTTACTAG
ATATTATTGGTTAATGCTTG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MADKMFENNQVSIIGEIVSDFQFSHEVYGEGFYMMEVSVRRLSDCMDYIPVMVSERLINVEGDYIGKSVYIGGQFRSFNR
HEEKKNRLVLSVFARELEVLDSDYDEDAANQIFLDGYICKEAIYRKTPLGREIADLLVAVNRSYGKSDYIPCICWGRNAR
FASTFEVGTHVQIWGRIQSRDYVKKLSETQVEQRTAYEVSVSKIEA

Sequences:

>Translated_206_residues
MADKMFENNQVSIIGEIVSDFQFSHEVYGEGFYMMEVSVRRLSDCMDYIPVMVSERLINVEGDYIGKSVYIGGQFRSFNR
HEEKKNRLVLSVFARELEVLDSDYDEDAANQIFLDGYICKEAIYRKTPLGREIADLLVAVNRSYGKSDYIPCICWGRNAR
FASTFEVGTHVQIWGRIQSRDYVKKLSETQVEQRTAYEVSVSKIEA
>Mature_205_residues
ADKMFENNQVSIIGEIVSDFQFSHEVYGEGFYMMEVSVRRLSDCMDYIPVMVSERLINVEGDYIGKSVYIGGQFRSFNRH
EEKKNRLVLSVFARELEVLDSDYDEDAANQIFLDGYICKEAIYRKTPLGREIADLLVAVNRSYGKSDYIPCICWGRNARF
ASTFEVGTHVQIWGRIQSRDYVKKLSETQVEQRTAYEVSVSKIEA

Specific function: Unknown

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23782; Mature: 23651

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKMFENNQVSIIGEIVSDFQFSHEVYGEGFYMMEVSVRRLSDCMDYIPVMVSERLINV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
EGDYIGKSVYIGGQFRSFNRHEEKKNRLVLSVFARELEVLDSDYDEDAANQIFLDGYICK
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHH
EAIYRKTPLGREIADLLVAVNRSYGKSDYIPCICWGRNARFASTFEVGTHVQIWGRIQSR
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECHH
DYVKKLSETQVEQRTAYEVSVSKIEA
HHHHHHHHHHHHHHHHHEEEHHEECC
>Mature Secondary Structure 
ADKMFENNQVSIIGEIVSDFQFSHEVYGEGFYMMEVSVRRLSDCMDYIPVMVSERLINV
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
EGDYIGKSVYIGGQFRSFNRHEEKKNRLVLSVFARELEVLDSDYDEDAANQIFLDGYICK
CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHH
EAIYRKTPLGREIADLLVAVNRSYGKSDYIPCICWGRNARFASTFEVGTHVQIWGRIQSR
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEEEECHH
DYVKKLSETQVEQRTAYEVSVSKIEA
HHHHHHHHHHHHHHHHHEEEHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA