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The map label for this gene is secY [H]

Identifier: 238924861

GI number: 238924861

Start: 2379949

End: 2381193

Strand: Reverse

Name: secY [H]

Synonym: EUBREC_2512

Alternate gene names: 238924861

Gene position: 2381193-2379949 (Counterclockwise)

Preceding gene: 238924862

Following gene: 238924860

Centisome position: 69.03

GC content: 35.58

Gene sequence:

>1245_bases
ATGGTCACTAATACTATTCAAAGGAAGAGGAAATCATTGAAAGAGAAGAGACAAAAAGAACATGTATTATTGTATAAGAT
ATTGTATTCTCTAATGATAATGCTTGTATATATGATTGGAAGAAATATCCCATTATATGGAATAGATCTGAAAGCATATG
AGGATGTGAGTGTTGATGCACAATCTATTTTGCTTCAGGCATTATCAGGAGATATGAAAAACTGTTCATTGTTTATTCTG
GGATTGTGGCCATATATGATTGCTTCAATACTTGCAGTGCTACTGGTAGCAATAATATCTTTAGACAGTTCCCGAAAGAT
ATCTCCAAGAAAACTTAATATATGGACACTTTTTTTTATGATGGTAATTGCATTTATCCAGGCATATCAGAAGGTTCAGA
CATTTGTGTACAAGGATATGGATGCGCAGATGCTGTTGATTACAAAGATAATTGTGTTTATACAGCTTATAGCAGGCATG
CTTATAGTAGTGTATATGTGTGATAGAACCACGAAATACGGTATTGGTGGTCGAATGAGTGTATTCATGATAAATATTGT
GGATGGAATGATGAATATGTTTGCAGGACAGAAAGCAGACAGACTGATTTTGCCTGTAATTATCGGTGTTGTTGAGATTG
CTATTATGGTTATAATAGAAACAACTGAAAAGAGAATAGCAGTACAGAGAGTTTCCATAAACAATATTTATGCAGATAAG
AATTACCTGGCATATAAGTTAAATCCTGTGGGTGCAATGCCGCTTATGTTCACCTCAGCGGTATTTATGCTGCCACAGTT
TGTCTGTTCGGGCTTATATTATCTGCACCCGGATAATCAAAAGCTTGCATGGCTTGTTGATAATCTTAGGCTCACGGCTG
TTTTTGGAATTATAGTATATTTGGCAATTATTGTATTGCTTACTATTTTATTTTCTGTGATAATGCTCACACCGGGCAAG
GAAGCCGAGAATCTGTTGAAATCAGGGGATTCTATTCTGGATATATATGCAGGCAAGCCGACTCGCAGATATCTTGTGGG
TACGGTAATCAGATTTTCTATATACAGCTCGATAATTATATGTATATGTCAGGGAGTTCCGCTATTTCTTCAATTTGGAG
GATATATTGATTCAACACTGGCTATGTTACCATGCTCTATAATGATGTCGACAGGCATTTGGATATCGTTATATAGAGAG
GCTGAGGTTTATAGAAATATGGACAGATATCATCCATTTATATAG

Upstream 100 bases:

>100_bases
GCAAAGAGTGATGACTCTGAGGATAATTCTGATGAGAAATAAATAATCAATAGCAATACTAAGAATATTGTTTTATAATG
TTAGTGACCATCTGTTATGG

Downstream 100 bases:

>100_bases
TATAAGGAGATTTTTAATGTTATATTTTGTACCGGCATGGTATAAGGAAAACTCATGGATTGAAAATGAACAGCAATGGT
ACATGAGGAGAATGAAATCA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MVTNTIQRKRKSLKEKRQKEHVLLYKILYSLMIMLVYMIGRNIPLYGIDLKAYEDVSVDAQSILLQALSGDMKNCSLFIL
GLWPYMIASILAVLLVAIISLDSSRKISPRKLNIWTLFFMMVIAFIQAYQKVQTFVYKDMDAQMLLITKIIVFIQLIAGM
LIVVYMCDRTTKYGIGGRMSVFMINIVDGMMNMFAGQKADRLILPVIIGVVEIAIMVIIETTEKRIAVQRVSINNIYADK
NYLAYKLNPVGAMPLMFTSAVFMLPQFVCSGLYYLHPDNQKLAWLVDNLRLTAVFGIIVYLAIIVLLTILFSVIMLTPGK
EAENLLKSGDSILDIYAGKPTRRYLVGTVIRFSIYSSIIICICQGVPLFLQFGGYIDSTLAMLPCSIMMSTGIWISLYRE
AEVYRNMDRYHPFI

Sequences:

>Translated_414_residues
MVTNTIQRKRKSLKEKRQKEHVLLYKILYSLMIMLVYMIGRNIPLYGIDLKAYEDVSVDAQSILLQALSGDMKNCSLFIL
GLWPYMIASILAVLLVAIISLDSSRKISPRKLNIWTLFFMMVIAFIQAYQKVQTFVYKDMDAQMLLITKIIVFIQLIAGM
LIVVYMCDRTTKYGIGGRMSVFMINIVDGMMNMFAGQKADRLILPVIIGVVEIAIMVIIETTEKRIAVQRVSINNIYADK
NYLAYKLNPVGAMPLMFTSAVFMLPQFVCSGLYYLHPDNQKLAWLVDNLRLTAVFGIIVYLAIIVLLTILFSVIMLTPGK
EAENLLKSGDSILDIYAGKPTRRYLVGTVIRFSIYSSIIICICQGVPLFLQFGGYIDSTLAMLPCSIMMSTGIWISLYRE
AEVYRNMDRYHPFI
>Mature_414_residues
MVTNTIQRKRKSLKEKRQKEHVLLYKILYSLMIMLVYMIGRNIPLYGIDLKAYEDVSVDAQSILLQALSGDMKNCSLFIL
GLWPYMIASILAVLLVAIISLDSSRKISPRKLNIWTLFFMMVIAFIQAYQKVQTFVYKDMDAQMLLITKIIVFIQLIAGM
LIVVYMCDRTTKYGIGGRMSVFMINIVDGMMNMFAGQKADRLILPVIIGVVEIAIMVIIETTEKRIAVQRVSINNIYADK
NYLAYKLNPVGAMPLMFTSAVFMLPQFVCSGLYYLHPDNQKLAWLVDNLRLTAVFGIIVYLAIIVLLTILFSVIMLTPGK
EAENLLKSGDSILDIYAGKPTRRYLVGTVIRFSIYSSIIICICQGVPLFLQFGGYIDSTLAMLPCSIMMSTGIWISLYRE
AEVYRNMDRYHPFI

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=388, Percent_Identity=20.6185567010309, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47089; Mature: 47089

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTNTIQRKRKSLKEKRQKEHVLLYKILYSLMIMLVYMIGRNIPLYGIDLKAYEDVSVDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCH
QSILLQALSGDMKNCSLFILGLWPYMIASILAVLLVAIISLDSSRKISPRKLNIWTLFFM
HHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
MVIAFIQAYQKVQTFVYKDMDAQMLLITKIIVFIQLIAGMLIVVYMCDRTTKYGIGGRMS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VFMINIVDGMMNMFAGQKADRLILPVIIGVVEIAIMVIIETTEKRIAVQRVSINNIYADK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECCEEECC
NYLAYKLNPVGAMPLMFTSAVFMLPQFVCSGLYYLHPDNQKLAWLVDNLRLTAVFGIIVY
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEHHHHHHHHHHHHHHHHH
LAIIVLLTILFSVIMLTPGKEAENLLKSGDSILDIYAGKPTRRYLVGTVIRFSIYSSIII
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
CICQGVPLFLQFGGYIDSTLAMLPCSIMMSTGIWISLYREAEVYRNMDRYHPFI
HHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCHHHCCCCC
>Mature Secondary Structure
MVTNTIQRKRKSLKEKRQKEHVLLYKILYSLMIMLVYMIGRNIPLYGIDLKAYEDVSVDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCH
QSILLQALSGDMKNCSLFILGLWPYMIASILAVLLVAIISLDSSRKISPRKLNIWTLFFM
HHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
MVIAFIQAYQKVQTFVYKDMDAQMLLITKIIVFIQLIAGMLIVVYMCDRTTKYGIGGRMS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
VFMINIVDGMMNMFAGQKADRLILPVIIGVVEIAIMVIIETTEKRIAVQRVSINNIYADK
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEECCEEECC
NYLAYKLNPVGAMPLMFTSAVFMLPQFVCSGLYYLHPDNQKLAWLVDNLRLTAVFGIIVY
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEHHHHHHHHHHHHHHHHH
LAIIVLLTILFSVIMLTPGKEAENLLKSGDSILDIYAGKPTRRYLVGTVIRFSIYSSIII
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
CICQGVPLFLQFGGYIDSTLAMLPCSIMMSTGIWISLYREAEVYRNMDRYHPFI
HHHCCCHHHHHHCCHHHHHHHHHHHHHHHHCCHHEEEHHHHHHHHCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]