| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yeaJ [C]
Identifier: 238924853
GI number: 238924853
Start: 2367641
End: 2370409
Strand: Reverse
Name: yeaJ [C]
Synonym: EUBREC_2504
Alternate gene names: 238924853
Gene position: 2370409-2367641 (Counterclockwise)
Preceding gene: 238924854
Following gene: 238924852
Centisome position: 68.71
GC content: 44.56
Gene sequence:
>2769_bases ATGATGGCCTTTTTGATTGTTGGATTTATAATTGCCGAGTGCATATTACCGAGTGAGAGAAGCCAGTCTGTAAGTGATAA TAATATCACCTACGAGGGCAGCTTTACATGGGAGAAGTCCGATGGTGAAAGGGAGGCTATTGAAGTACCCGGCAGGTACG ATGTTAAGCCGGGGGATACGATGGTCATAACTACTGTTCTGCCTGATGATTTCAATGCAAGTGTCATGGCAATCAGAGCA TCACTTCAGACAGTCAGATTTTACGTGGATGGCAGTCTGAGAGCAGAGTATGATACAAAGGACACGAGACCCTTCGGCAA GGATTCCGCGAGCAGATATGTATTTTGCAATATGTCGGAGGATGATGCCGGCAAAGAGCTGCGCATTGAGCTGACAAGCC ATGCATCCAACTATTCAGGCGTTGTAAATACAGTATACTGTGGAGAAAAGAGCGATATATGGACAAATATATTTCATAAT AGCTCAAGAGAGACGATTATAGCATTTTTCATTTTTTTTGCTGCTGTAGTGTCTGTTATGTTCAGTATAGCACTCAGTAT TGTATACAAGACACATTTTGACATGGAGTATGTAGGCTGGTGTATGCTTCTTGGGGCAATATGGATGCTTGGTGAATCGA AGCTGCGTCAGATGCTGGTGCCGAATGCATCTGTTTTGGCGGCTATGTGCTTTGTGGTTATTCTGATTAGTCCTATTGCT GTTTCGATTTATATTGACAGCATACAGGGTGGGCGTTATACAAGAGTGTATACATGCATAGAGGCACTTGCGGCTGTGAA TTTCATTGTCTGCACAGCTTTGCAGCTTTTTGGTGTGTGCGATTATATAGAGACTCTGCCGGCAGGACAGGGAATGCTTG CTGTCTGCTGCGCGGTCGTTATCACAACGTTTATCATTGATATAATTAAGCATAGGACATTGGGCTACAGACCTGAGATG GTTGCCATGATTATAGCACTTGTTCTGGTGCTTATAGAGGCTGCTTCTGTGTACTTTGTTGTCACTATGTCAGGCTTCTT TATCGGAACAGGCCTTATTGTGATTTTGTTTGTCAATATAATAGTCACAATAAAAAGAATCAGCGAGATAGAATACAAGC GCCAGAAGGAAGAAAGTGACAGGCTTAGAAATCAGACAGAGAGAGTTTCCCTTCAGATGATGAAGACACTCGCTGCTACA ATAGAAGCAAAGGATGATTATATGAGAGGGCACTCATACAGGGTGGCAGAGTACTCTGCTCTCATTGCAAAGCAGCTTGG CTGGAGTGAGCATGAGATGGAGAATCTTAGAAATGCTGCATATCTGCATGATATCGGAAAGATTGGCGTGCCTGATACAA TATTAAATAAGCCGACCAGGCTGACCGATGAAGAGTTTGCAGCCATAAAGAGCCATACTGTGATGGGCGCAGATATCTTA AAGGATATCACACTGTTAGACCATCTGGTGGATATTGCAAGGAATCATCATGAGCGCTACGATGGAAAGGGCTATCCTGA CGGACTGGTGGGAGAGGAAATACCGCTTTCTGCCCGTATAGTGTGTGTGGCAGACAGCTATGATGCCATGAAATCGCGCA GGATTTACAGGAATGCACTGCCCGATGAAGAAATCCGAAGGGAGCTTTTGGATAACTGCGGCACGCAGTTTGACCCGCAG ATATCGCGTATGTTTGTTGATATGCTTGACAATGGCATGGTTGTGATTGATGAGGATAATCCTGCGGCTCAGGGCTACCG TGATAATGCGGCTATCGAGTCAGTGGCAGACAAATTCATATCTGAGGTCATGAAGACCATGAGCAGTCAGGAAAAAGCCG ATAGTGTTGATTATCTGACAGGACTTTACATGCGAAGTCGTGGACAGCAGGTAATAGCAGCCCTGATGCAGGATAATGAT GGCTGTCTTGCCTTCATAGATATGGATAATCTCAAAAAAGTCAATGATGTGCATGGTCACAAGGCGGGTGACAGGGCACT TAAGCTTATAGGTAATCTCCTTGCTAAAGAGACTGAGAATGAGACCTTTGCAGCCTGCAGGCTTGGAGGTGACGAGTTCC TCATCTTTATGCCATATTCTGACAGGGCAAGCGTGGAGAGTGTTATAAAGCGCATATTTGAGGGCTTCGAGAGCGCCAGG GAAGCAGACTGTGAGATAAAGGAGGCCGCTCTTTCAGCAGGACTGTGCATGACGACAAAGGGAGCCATGTTTGAAAGTGA CTACACAAAGGCAGATAAGGCGCTCTACTATGTGAAGCAGAACTGTAAGGGTTCATATTTCTTCTATGAGCAGCTCTTAG CTGACAATAAGGAGAATACAAATCTGAGTGCGGATTTACGAAACGTGGCAAAGCTTTTAAAGGAGAGTGGCAGCTATACA GGTGCGTTGGATTTAAACTACAGAGAGTTTGCAAGAATCTATGAGTTCGTGAACAATGTAGGAGATAGGCACAACCACAA CTGCTATCTGGTCATGGTGACTATGAACACTCTGCCGGAGCAGCTTGCAGATATCGAGGAAATTGAGAAGGCACTTGACT GCATGGAACAGTCTATCCGCAGTAAGATCAGAAAGGTGGATGTCTGCACGCGCTACAGCTCAATGCAGTATCTTATCATA CTATTTGAGCCACAGGAAAATCAGATTCCAAATGTCATGGAGAGAATCTTTATGCATTACTATGAGCTCTGTGACAGAGA GAATTTCAAGCCGCAGTATGAGTATATCAAAATGACTGAGGTAAAATAG
Upstream 100 bases:
>100_bases GAAAACCTGACTATTATAAAGCAGACCTTATGTTTGCGGAATAGGATAAGTGATGGATAGATACAGCGTGAGTAGGACAA AGAGGTCATTGTTTTATTTA
Downstream 100 bases:
>100_bases GGATTGTTAAATAATAGTCAATGTGGTATAGTTTTCTTCGAACGGTATTCGAAGGAAACTGTATCATGGAGGATGTGTTG TCACCTTATGACAGAGCATA
Product: response regulator receiver modulated metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 922; Mature: 922
Protein sequence:
>922_residues MMAFLIVGFIIAECILPSERSQSVSDNNITYEGSFTWEKSDGEREAIEVPGRYDVKPGDTMVITTVLPDDFNASVMAIRA SLQTVRFYVDGSLRAEYDTKDTRPFGKDSASRYVFCNMSEDDAGKELRIELTSHASNYSGVVNTVYCGEKSDIWTNIFHN SSRETIIAFFIFFAAVVSVMFSIALSIVYKTHFDMEYVGWCMLLGAIWMLGESKLRQMLVPNASVLAAMCFVVILISPIA VSIYIDSIQGGRYTRVYTCIEALAAVNFIVCTALQLFGVCDYIETLPAGQGMLAVCCAVVITTFIIDIIKHRTLGYRPEM VAMIIALVLVLIEAASVYFVVTMSGFFIGTGLIVILFVNIIVTIKRISEIEYKRQKEESDRLRNQTERVSLQMMKTLAAT IEAKDDYMRGHSYRVAEYSALIAKQLGWSEHEMENLRNAAYLHDIGKIGVPDTILNKPTRLTDEEFAAIKSHTVMGADIL KDITLLDHLVDIARNHHERYDGKGYPDGLVGEEIPLSARIVCVADSYDAMKSRRIYRNALPDEEIRRELLDNCGTQFDPQ ISRMFVDMLDNGMVVIDEDNPAAQGYRDNAAIESVADKFISEVMKTMSSQEKADSVDYLTGLYMRSRGQQVIAALMQDND GCLAFIDMDNLKKVNDVHGHKAGDRALKLIGNLLAKETENETFAACRLGGDEFLIFMPYSDRASVESVIKRIFEGFESAR EADCEIKEAALSAGLCMTTKGAMFESDYTKADKALYYVKQNCKGSYFFYEQLLADNKENTNLSADLRNVAKLLKESGSYT GALDLNYREFARIYEFVNNVGDRHNHNCYLVMVTMNTLPEQLADIEEIEKALDCMEQSIRSKIRKVDVCTRYSSMQYLII LFEPQENQIPNVMERIFMHYYELCDRENFKPQYEYIKMTEVK
Sequences:
>Translated_922_residues MMAFLIVGFIIAECILPSERSQSVSDNNITYEGSFTWEKSDGEREAIEVPGRYDVKPGDTMVITTVLPDDFNASVMAIRA SLQTVRFYVDGSLRAEYDTKDTRPFGKDSASRYVFCNMSEDDAGKELRIELTSHASNYSGVVNTVYCGEKSDIWTNIFHN SSRETIIAFFIFFAAVVSVMFSIALSIVYKTHFDMEYVGWCMLLGAIWMLGESKLRQMLVPNASVLAAMCFVVILISPIA VSIYIDSIQGGRYTRVYTCIEALAAVNFIVCTALQLFGVCDYIETLPAGQGMLAVCCAVVITTFIIDIIKHRTLGYRPEM VAMIIALVLVLIEAASVYFVVTMSGFFIGTGLIVILFVNIIVTIKRISEIEYKRQKEESDRLRNQTERVSLQMMKTLAAT IEAKDDYMRGHSYRVAEYSALIAKQLGWSEHEMENLRNAAYLHDIGKIGVPDTILNKPTRLTDEEFAAIKSHTVMGADIL KDITLLDHLVDIARNHHERYDGKGYPDGLVGEEIPLSARIVCVADSYDAMKSRRIYRNALPDEEIRRELLDNCGTQFDPQ ISRMFVDMLDNGMVVIDEDNPAAQGYRDNAAIESVADKFISEVMKTMSSQEKADSVDYLTGLYMRSRGQQVIAALMQDND GCLAFIDMDNLKKVNDVHGHKAGDRALKLIGNLLAKETENETFAACRLGGDEFLIFMPYSDRASVESVIKRIFEGFESAR EADCEIKEAALSAGLCMTTKGAMFESDYTKADKALYYVKQNCKGSYFFYEQLLADNKENTNLSADLRNVAKLLKESGSYT GALDLNYREFARIYEFVNNVGDRHNHNCYLVMVTMNTLPEQLADIEEIEKALDCMEQSIRSKIRKVDVCTRYSSMQYLII LFEPQENQIPNVMERIFMHYYELCDRENFKPQYEYIKMTEVK >Mature_922_residues MMAFLIVGFIIAECILPSERSQSVSDNNITYEGSFTWEKSDGEREAIEVPGRYDVKPGDTMVITTVLPDDFNASVMAIRA SLQTVRFYVDGSLRAEYDTKDTRPFGKDSASRYVFCNMSEDDAGKELRIELTSHASNYSGVVNTVYCGEKSDIWTNIFHN SSRETIIAFFIFFAAVVSVMFSIALSIVYKTHFDMEYVGWCMLLGAIWMLGESKLRQMLVPNASVLAAMCFVVILISPIA VSIYIDSIQGGRYTRVYTCIEALAAVNFIVCTALQLFGVCDYIETLPAGQGMLAVCCAVVITTFIIDIIKHRTLGYRPEM VAMIIALVLVLIEAASVYFVVTMSGFFIGTGLIVILFVNIIVTIKRISEIEYKRQKEESDRLRNQTERVSLQMMKTLAAT IEAKDDYMRGHSYRVAEYSALIAKQLGWSEHEMENLRNAAYLHDIGKIGVPDTILNKPTRLTDEEFAAIKSHTVMGADIL KDITLLDHLVDIARNHHERYDGKGYPDGLVGEEIPLSARIVCVADSYDAMKSRRIYRNALPDEEIRRELLDNCGTQFDPQ ISRMFVDMLDNGMVVIDEDNPAAQGYRDNAAIESVADKFISEVMKTMSSQEKADSVDYLTGLYMRSRGQQVIAALMQDND GCLAFIDMDNLKKVNDVHGHKAGDRALKLIGNLLAKETENETFAACRLGGDEFLIFMPYSDRASVESVIKRIFEGFESAR EADCEIKEAALSAGLCMTTKGAMFESDYTKADKALYYVKQNCKGSYFFYEQLLADNKENTNLSADLRNVAKLLKESGSYT GALDLNYREFARIYEFVNNVGDRHNHNCYLVMVTMNTLPEQLADIEEIEKALDCMEQSIRSKIRKVDVCTRYSSMQYLII LFEPQENQIPNVMERIFMHYYELCDRENFKPQYEYIKMTEVK
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Escherichia coli, GI87081974, Length=150, Percent_Identity=30.6666666666667, Blast_Score=67, Evalue=6e-12, Organism=Escherichia coli, GI1787262, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104244; Mature: 104244
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAFLIVGFIIAECILPSERSQSVSDNNITYEGSFTWEKSDGEREAIEVPGRYDVKPGDT CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEEEECCCCCCCEEECCCCCCCCCCCE MVITTVLPDDFNASVMAIRASLQTVRFYVDGSLRAEYDTKDTRPFGKDSASRYVFCNMSE EEEEEECCCCCCCHHHHHHHHHHHEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCC DDAGKELRIELTSHASNYSGVVNTVYCGEKSDIWTNIFHNSSRETIIAFFIFFAAVVSVM CCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH FSIALSIVYKTHFDMEYVGWCMLLGAIWMLGESKLRQMLVPNASVLAAMCFVVILISPIA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VSIYIDSIQGGRYTRVYTCIEALAAVNFIVCTALQLFGVCDYIETLPAGQGMLAVCCAVV EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ITTFIIDIIKHRTLGYRPEMVAMIIALVLVLIEAASVYFVVTMSGFFIGTGLIVILFVNI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHH IVTIKRISEIEYKRQKEESDRLRNQTERVSLQMMKTLAATIEAKDDYMRGHSYRVAEYSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEHHHHHH LIAKQLGWSEHEMENLRNAAYLHDIGKIGVPDTILNKPTRLTDEEFAAIKSHTVMGADIL HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHH KDITLLDHLVDIARNHHERYDGKGYPDGLVGEEIPLSARIVCVADSYDAMKSRRIYRNAL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC PDEEIRRELLDNCGTQFDPQISRMFVDMLDNGMVVIDEDNPAAQGYRDNAAIESVADKFI CHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH SEVMKTMSSQEKADSVDYLTGLYMRSRGQQVIAALMQDNDGCLAFIDMDNLKKVNDVHGH HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCC KAGDRALKLIGNLLAKETENETFAACRLGGDEFLIFMPYSDRASVESVIKRIFEGFESAR CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH EADCEIKEAALSAGLCMTTKGAMFESDYTKADKALYYVKQNCKGSYFFYEQLLADNKENT HCCCHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC NLSADLRNVAKLLKESGSYTGALDLNYREFARIYEFVNNVGDRHNHNCYLVMVTMNTLPE CCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHH QLADIEEIEKALDCMEQSIRSKIRKVDVCTRYSSMQYLIILFEPQENQIPNVMERIFMHY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH YELCDRENFKPQYEYIKMTEVK HHHHCCCCCCCCCCEEEEECCC >Mature Secondary Structure MMAFLIVGFIIAECILPSERSQSVSDNNITYEGSFTWEKSDGEREAIEVPGRYDVKPGDT CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEEEECCCCCCCEEECCCCCCCCCCCE MVITTVLPDDFNASVMAIRASLQTVRFYVDGSLRAEYDTKDTRPFGKDSASRYVFCNMSE EEEEEECCCCCCCHHHHHHHHHHHEEEEECCCEEECCCCCCCCCCCCCCCCCEEEEECCC DDAGKELRIELTSHASNYSGVVNTVYCGEKSDIWTNIFHNSSRETIIAFFIFFAAVVSVM CCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH FSIALSIVYKTHFDMEYVGWCMLLGAIWMLGESKLRQMLVPNASVLAAMCFVVILISPIA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VSIYIDSIQGGRYTRVYTCIEALAAVNFIVCTALQLFGVCDYIETLPAGQGMLAVCCAVV EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ITTFIIDIIKHRTLGYRPEMVAMIIALVLVLIEAASVYFVVTMSGFFIGTGLIVILFVNI HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHH IVTIKRISEIEYKRQKEESDRLRNQTERVSLQMMKTLAATIEAKDDYMRGHSYRVAEYSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEHHHHHH LIAKQLGWSEHEMENLRNAAYLHDIGKIGVPDTILNKPTRLTDEEFAAIKSHTVMGADIL HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHH KDITLLDHLVDIARNHHERYDGKGYPDGLVGEEIPLSARIVCVADSYDAMKSRRIYRNAL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCC PDEEIRRELLDNCGTQFDPQISRMFVDMLDNGMVVIDEDNPAAQGYRDNAAIESVADKFI CHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH SEVMKTMSSQEKADSVDYLTGLYMRSRGQQVIAALMQDNDGCLAFIDMDNLKKVNDVHGH HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCC KAGDRALKLIGNLLAKETENETFAACRLGGDEFLIFMPYSDRASVESVIKRIFEGFESAR CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH EADCEIKEAALSAGLCMTTKGAMFESDYTKADKALYYVKQNCKGSYFFYEQLLADNKENT HCCCHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC NLSADLRNVAKLLKESGSYTGALDLNYREFARIYEFVNNVGDRHNHNCYLVMVTMNTLPE CCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHH QLADIEEIEKALDCMEQSIRSKIRKVDVCTRYSSMQYLIILFEPQENQIPNVMERIFMHY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHH YELCDRENFKPQYEYIKMTEVK HHHHCCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]