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The map label for this gene is 238924846

Identifier: 238924846

GI number: 238924846

Start: 2361079

End: 2363193

Strand: Reverse

Name: 238924846

Synonym: EUBREC_2497

Alternate gene names: NA

Gene position: 2363193-2361079 (Counterclockwise)

Preceding gene: 238924847

Following gene: 238924845

Centisome position: 68.5

GC content: 33.38

Gene sequence:

>2115_bases
ATGGAATATATTGCGCATATAGAAGAAGAAAGAAAGCAAAGGCTTATTGATCATTTGGATGGAACTGCCAAATTAGCCGG
AAAATTTGCAGAATCATTTGGAAAATATGAGTGGGGATATTGCATAGGTATGTTACATGATCTAGGTAAGTATTCCAAAG
AATTTCAACATAAAATACAGTTTAATACGAATGACAGAGTAGACCATTCTACTGCTGGAATGAGATTATGTAATGAAAAA
GGTGGATATTATTCTATATTACAATATGCTATTGCAGGACATCATTCTGGACTAATGGATTACTATAAGCTTGAAGAACG
ATATAGAAAATCAATATGTGATTATCAGGCATATAGACAGGAGGTAGAAATTCCACAAATAAAAAGTGATCCTTTTGAGA
GCTGTAAAACACAAAATCCTCATTTTTCAATGGGGATTTTTATGAGGATGTTATATTCATGTCTTGTTGATGCGGACTTT
CTTGAAACAGAAAGTTTTATGAAGAATAACCATGTGGAACGAACATCGGGTGAAGAAATGGCATCTTTATTAGCAAGACT
GGAAAGACATATTGGTTCATGGTTAGAAAATGATGATCTTAATTCGATAAACGGTAGAAGAACTGAGATATTAAAAGCCT
GTCTGATAGCAGGTGAGAATGATAGGGGATTGTTTCACCTGACTGTTCCAACAGGTGGTGGAAAAACAATTGCCTCATTG
GCATTTGCGTTAAAGCATGCAGTCAGGCATCAAATGGAGCATATTATATATGTTATTCCATATACTAGCATTATAGAACA
GAATGCTCAGGTGTTTCGTGAAATACTTGGGCAGGATAATGTTCTTGAGAATCATTGTAATGTCGATTATGGGGATTCTG
AAGAATTAAAACCGATGCAGCTTGCCAGCGAAAACTGGGATAAACCTGTAATTGTCACGACTAATGTTCAATTTTTTGAA
TCATTATTCGCAAGCAGGTCATCTAAGTGTAGGAAAATTCATAATATTGCGAATTCTGTGGTTATATTTGATGAGGCACA
AATGTTGCCATTGGAATATTTGAAACCATGCATTGCCATGATGGAAAATTTAATGGATTTCTATAGGACAAGTATTGTTT
TATGTACGGCAACACAACCGGCCTTAGACAGTATATTTGATCAACACAGACGGTATATTGAATTATGCCCGAATATAAAT
GAGCAGTTTAAATTTTTTAAAAGAGTTATATACGAAAATCTTGGGATAATCGAATTTGATACTTTAATTGAAAGATTGAA
GACTGAAAAAAGAGCACTGTGTATTGTTAATACAAAAAAATGTGCACAGCAGCTTTACGAACAGTTAAGTGGTGATGGTG
TGTATCATTTATCAACAAGTATGTATCCTAAGCATCGTAAAAAGATACTTGCACAGATTAAAGAAAGAATGAGTGATAAA
TCAAAATCATGTGTGCTTATTTCAACAAGTTTGGTAGAGGCGGGAGTAGATCTTGATTTTAATTCAGTATATCGTCAAGT
AGCAGGAGTAGATTCGGTAATACAGGCAGCAGGTAGATGCAACCGAGAAGGAATTGAGAAAAAAGAAAACAGTAAAGTTT
ATATTTTTGATATAAATGGAATGAAAACAGTGCCGGGACAAAGTCTGCAAAGCTCAATCACTAAAGGGTTATTGCAAGAT
TATCATGATATTTCTAATCTTGAATGCATTACAGAATATTTCAAAAGGCTATATCATTTTAGAGAAAATGATTTGGATAA
AAAGAATATTATAGGCGAATTCAAGGATTGGAAATATAATTTTGAGACGGTATCAGAAAAATTTCATTTGATTGAGGAAA
ATACAAGAATTGTATTTATTCCGATAGAGCAGGAAGCTAAGGATTTATTATTTGAAATAAAAAATCAGGGTTATGGAAAA
GCCAGAATGAGAAAGGCATCCCAGTACTGTGTTCAGATATATAATCAGCTTTTTGATACTTTGTATGGTGCTGGTATAAT
TAAGGAAATAACATCGGATATAGAGAATTTTTATGAATTGGTAGATGAAGAAATGTATACAGATGACAAGGGATTAAATT
TGTCTGTGGAATCTGGAATGGATTTATATCTGTAA

Upstream 100 bases:

>100_bases
TTGAAAACTTAAAGGTTATGGAGGGCACAGGCTTCTCTGAGGAAGAGCTTAGGATGATTGATGAGATTGTGGGAGTGTAA
AGATGAATCTGGTGATATAA

Downstream 100 bases:

>100_bases
TTTAAATGGCTGTGTGAATTATAAACACAGCCATTTATTTGCATTATTAAAAATATTATTATTTCAATCCACAGGATTAG
CCTGACAAATGTAATTGTAC

Product: putative helicase

Products: NA

Alternate protein names: Helicase; CRISPR-Associated Helicase Cas3 Family Protein Protein; CRISPR-Associated Helicase Cas3 Domain Protein; ATP-Dependent RNA Helicase; CRISPR-Associated HD Domain Protein; CRISPR-Associated Helicase Cas3 Domain-Containing Protein; CRISPR-Associated Helicase; DEAD/DEAH Box Helicase Domain-Containing Protein; Helicases; CRISPR-Associated Helicase Cas3 Core; Crispr-Associated Helicase Cas3 Domain Protein; Crispr-Associated Hd Domain Protein; CRISPR-Associated Helicase Cas3 Family; Cas3 Family CRISPR-Associated Helicase; Helicase-Like Protein; Helicases-Like Protein; CRISPR-Associated Helicase Cas3 Protein; ATP-Dependent RNA Helicase-Like Protein; CRISPR-Associated HD Domain-Containing Protein; ATP-Dependent RNA Helicase SrmB

Number of amino acids: Translated: 704; Mature: 704

Protein sequence:

>704_residues
MEYIAHIEEERKQRLIDHLDGTAKLAGKFAESFGKYEWGYCIGMLHDLGKYSKEFQHKIQFNTNDRVDHSTAGMRLCNEK
GGYYSILQYAIAGHHSGLMDYYKLEERYRKSICDYQAYRQEVEIPQIKSDPFESCKTQNPHFSMGIFMRMLYSCLVDADF
LETESFMKNNHVERTSGEEMASLLARLERHIGSWLENDDLNSINGRRTEILKACLIAGENDRGLFHLTVPTGGGKTIASL
AFALKHAVRHQMEHIIYVIPYTSIIEQNAQVFREILGQDNVLENHCNVDYGDSEELKPMQLASENWDKPVIVTTNVQFFE
SLFASRSSKCRKIHNIANSVVIFDEAQMLPLEYLKPCIAMMENLMDFYRTSIVLCTATQPALDSIFDQHRRYIELCPNIN
EQFKFFKRVIYENLGIIEFDTLIERLKTEKRALCIVNTKKCAQQLYEQLSGDGVYHLSTSMYPKHRKKILAQIKERMSDK
SKSCVLISTSLVEAGVDLDFNSVYRQVAGVDSVIQAAGRCNREGIEKKENSKVYIFDINGMKTVPGQSLQSSITKGLLQD
YHDISNLECITEYFKRLYHFRENDLDKKNIIGEFKDWKYNFETVSEKFHLIEENTRIVFIPIEQEAKDLLFEIKNQGYGK
ARMRKASQYCVQIYNQLFDTLYGAGIIKEITSDIENFYELVDEEMYTDDKGLNLSVESGMDLYL

Sequences:

>Translated_704_residues
MEYIAHIEEERKQRLIDHLDGTAKLAGKFAESFGKYEWGYCIGMLHDLGKYSKEFQHKIQFNTNDRVDHSTAGMRLCNEK
GGYYSILQYAIAGHHSGLMDYYKLEERYRKSICDYQAYRQEVEIPQIKSDPFESCKTQNPHFSMGIFMRMLYSCLVDADF
LETESFMKNNHVERTSGEEMASLLARLERHIGSWLENDDLNSINGRRTEILKACLIAGENDRGLFHLTVPTGGGKTIASL
AFALKHAVRHQMEHIIYVIPYTSIIEQNAQVFREILGQDNVLENHCNVDYGDSEELKPMQLASENWDKPVIVTTNVQFFE
SLFASRSSKCRKIHNIANSVVIFDEAQMLPLEYLKPCIAMMENLMDFYRTSIVLCTATQPALDSIFDQHRRYIELCPNIN
EQFKFFKRVIYENLGIIEFDTLIERLKTEKRALCIVNTKKCAQQLYEQLSGDGVYHLSTSMYPKHRKKILAQIKERMSDK
SKSCVLISTSLVEAGVDLDFNSVYRQVAGVDSVIQAAGRCNREGIEKKENSKVYIFDINGMKTVPGQSLQSSITKGLLQD
YHDISNLECITEYFKRLYHFRENDLDKKNIIGEFKDWKYNFETVSEKFHLIEENTRIVFIPIEQEAKDLLFEIKNQGYGK
ARMRKASQYCVQIYNQLFDTLYGAGIIKEITSDIENFYELVDEEMYTDDKGLNLSVESGMDLYL
>Mature_704_residues
MEYIAHIEEERKQRLIDHLDGTAKLAGKFAESFGKYEWGYCIGMLHDLGKYSKEFQHKIQFNTNDRVDHSTAGMRLCNEK
GGYYSILQYAIAGHHSGLMDYYKLEERYRKSICDYQAYRQEVEIPQIKSDPFESCKTQNPHFSMGIFMRMLYSCLVDADF
LETESFMKNNHVERTSGEEMASLLARLERHIGSWLENDDLNSINGRRTEILKACLIAGENDRGLFHLTVPTGGGKTIASL
AFALKHAVRHQMEHIIYVIPYTSIIEQNAQVFREILGQDNVLENHCNVDYGDSEELKPMQLASENWDKPVIVTTNVQFFE
SLFASRSSKCRKIHNIANSVVIFDEAQMLPLEYLKPCIAMMENLMDFYRTSIVLCTATQPALDSIFDQHRRYIELCPNIN
EQFKFFKRVIYENLGIIEFDTLIERLKTEKRALCIVNTKKCAQQLYEQLSGDGVYHLSTSMYPKHRKKILAQIKERMSDK
SKSCVLISTSLVEAGVDLDFNSVYRQVAGVDSVIQAAGRCNREGIEKKENSKVYIFDINGMKTVPGQSLQSSITKGLLQD
YHDISNLECITEYFKRLYHFRENDLDKKNIIGEFKDWKYNFETVSEKFHLIEENTRIVFIPIEQEAKDLLFEIKNQGYGK
ARMRKASQYCVQIYNQLFDTLYGAGIIKEITSDIENFYELVDEEMYTDDKGLNLSVESGMDLYL

Specific function: Unknown

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81488; Mature: 81488

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIAHIEEERKQRLIDHLDGTAKLAGKFAESFGKYEWGYCIGMLHDLGKYSKEFQHKIQ
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
FNTNDRVDHSTAGMRLCNEKGGYYSILQYAIAGHHSGLMDYYKLEERYRKSICDYQAYRQ
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EVEIPQIKSDPFESCKTQNPHFSMGIFMRMLYSCLVDADFLETESFMKNNHVERTSGEEM
HCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHH
ASLLARLERHIGSWLENDDLNSINGRRTEILKACLIAGENDRGLFHLTVPTGGGKTIASL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH
AFALKHAVRHQMEHIIYVIPYTSIIEQNAQVFREILGQDNVLENHCNVDYGDSEELKPMQ
HHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCHHH
LASENWDKPVIVTTNVQFFESLFASRSSKCRKIHNIANSVVIFDEAQMLPLEYLKPCIAM
HHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH
MENLMDFYRTSIVLCTATQPALDSIFDQHRRYIELCPNINEQFKFFKRVIYENLGIIEFD
HHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEHH
TLIERLKTEKRALCIVNTKKCAQQLYEQLSGDGVYHLSTSMYPKHRKKILAQIKERMSDK
HHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC
SKSCVLISTSLVEAGVDLDFNSVYRQVAGVDSVIQAAGRCNREGIEKKENSKVYIFDING
CCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEECCC
MKTVPGQSLQSSITKGLLQDYHDISNLECITEYFKRLYHFRENDLDKKNIIGEFKDWKYN
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
FETVSEKFHLIEENTRIVFIPIEQEAKDLLFEIKNQGYGKARMRKASQYCVQIYNQLFDT
HHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LYGAGIIKEITSDIENFYELVDEEMYTDDKGLNLSVESGMDLYL
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MEYIAHIEEERKQRLIDHLDGTAKLAGKFAESFGKYEWGYCIGMLHDLGKYSKEFQHKIQ
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
FNTNDRVDHSTAGMRLCNEKGGYYSILQYAIAGHHSGLMDYYKLEERYRKSICDYQAYRQ
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EVEIPQIKSDPFESCKTQNPHFSMGIFMRMLYSCLVDADFLETESFMKNNHVERTSGEEM
HCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHH
ASLLARLERHIGSWLENDDLNSINGRRTEILKACLIAGENDRGLFHLTVPTGGGKTIASL
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHH
AFALKHAVRHQMEHIIYVIPYTSIIEQNAQVFREILGQDNVLENHCNVDYGDSEELKPMQ
HHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCHHH
LASENWDKPVIVTTNVQFFESLFASRSSKCRKIHNIANSVVIFDEAQMLPLEYLKPCIAM
HHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH
MENLMDFYRTSIVLCTATQPALDSIFDQHRRYIELCPNINEQFKFFKRVIYENLGIIEFD
HHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEHH
TLIERLKTEKRALCIVNTKKCAQQLYEQLSGDGVYHLSTSMYPKHRKKILAQIKERMSDK
HHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCC
SKSCVLISTSLVEAGVDLDFNSVYRQVAGVDSVIQAAGRCNREGIEKKENSKVYIFDING
CCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEECCC
MKTVPGQSLQSSITKGLLQDYHDISNLECITEYFKRLYHFRENDLDKKNIIGEFKDWKYN
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
FETVSEKFHLIEENTRIVFIPIEQEAKDLLFEIKNQGYGKARMRKASQYCVQIYNQLFDT
HHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
LYGAGIIKEITSDIENFYELVDEEMYTDDKGLNLSVESGMDLYL
HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA