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The map label for this gene is 238924842

Identifier: 238924842

GI number: 238924842

Start: 2357552

End: 2359288

Strand: Reverse

Name: 238924842

Synonym: EUBREC_2493

Alternate gene names: NA

Gene position: 2359288-2357552 (Counterclockwise)

Preceding gene: 238924843

Following gene: 238924841

Centisome position: 68.39

GC content: 34.83

Gene sequence:

>1737_bases
ATGATCTTACAGGCATTAGTGAAAGAATATGAGAATCTTGCAGAGAATAATCTGGTGCCGAAGAGAGGCTGGTGTCAGGC
CAAGGTTTCTTATGCAATAGATTTAAATCCTAATGGGAAAATCAAAGAAATTTATCCACTAAAAACAGAACAGACTAGTG
GAAAAAAGAAGGTTTTTCTTCCGGTTGCGAAGAGTGTTCCTGAAATGGTTACACGTTCATCGGGCGTGGCAGCTAATTTT
CTCTGTGATAATGTAAAATACATGCTAGGGATTGATCAAAATGGAACAAATGCAAGGGTGCAGGAGTGTTTTCAGGCAGC
GAAGGAAAAACATTTAGCGTTGTTAAAGAATGTTGATGAGCCTATGGCAAATGCAATTTGTAATTTTTTTAATTTATGGG
ATCCAGAGACGGCTTATGATAATGCATGTGTGAGAGAAAAATCAGATGAATTAAATGAGGGTGGTAATGTCATCTTTTGT
ATGGGAAATGATTTCGCACAGGATAATGATACAATTAAAAAAATTTGGGACAACTATGTTGTACATCAGACAGAAAATAC
CAATGATGGTATTTGTCTTGCAACTGGTGAAAAAACGGAGATAGCAAGAATTCATCGTGGAATAAAAGGTGTTCCAGGAG
CACAGACAAGTGGAGCTGCTTTGGTTTCGTTTAATGCACCGGCATTTGAATCTTATGGCAAGGAACAGAGCTATAATGCA
CCTGTAGGAAAAAATGCGGAGTTTGCATATACAACTGCATTGAATTATTTGTTGAGTAATAGGGATAAGATATTTCAATT
AGGTGATTCCATGGTGGTTTATTGGGCTGAAAATGGCATGGAAGAATATCAGAAAACATTTAGTTTTGTTATGAATCCTC
ATGTAGATAATGAGGAACAGCTTCAAAGAATATTTGACAGCTTGAAAAAATCAAGATATGTGGATGTAGATAATGTTAAG
ATGGACTTTGAGCAGTCATTTTATATTTTATGCCTTGCACCGAATGCTGCGAGGTTATCTGTTCGTTTCTTTTATCAAAA
CACATTTGGTGATATTTTAAAAAATATAAAAGAACATTATAAACGGTTGGATATTGTGAAACCATTGTGGGTGGAAAAGA
AATATCTGAGCGTATATGAATTGTTAAGAGAGACTGTCAATCCTAATTCAAAGGATAAGACTCCAATCCCTAATATGTCT
GCAATGGTACTTCAAAGTATTTTATCGGGAAACAGATATCCTGCAAGTCTTTATACAGACACTGTTATCAGAATACGATC
TGAGCAGGGAAATGTTACATGGGGACGAGCTTCAATTATCAAGGCTTATTTAATAAAAAATTATTCATGGAAGGAAGGAG
AAAACTACATGGGATTAGAAGAAACATGCAATGACACTGCATACGTATTGGGAAGATTATTTTCAGTCTTGGAGTCAATC
CAAAAGGAGGCGAATCAGGGAATAAATGCTACAATTAAAGACAGGTATTTTAATTCAGCATGTGCTACGCCTGCATCTGT
TTTTCCAATTTTATTTAAATTAGAAAATAGTCATATAAAAAAACTTGAGCGTGAAAAAGGTAGCGGTTCTAAGATTTTTT
ATGAAAAAATAATAGGAAACCTTATGGAAAAATTAGTATTATTTCCACGGAGTTTGTCTTTAGAAGAACAAGGAAAATTC
ATGTTGGGATATTATCATCAGACACAAAAGAAGTATGAAAAAAAGGAGAACAAATAA

Upstream 100 bases:

>100_bases
TGGATTATAGTGATTGTGAAAGAGGCAATATCAGTCCAATGTTTTTTAGAGCAGTGATGAAGCGTGGAGTAATAGATTTA
AGGGACTGTGAGGTGATAAG

Downstream 100 bases:

>100_bases
ATGGGAGAGGTTATTAAAAACAGATATGAGTTTGTTGTTTTATTTGATGTGGAAAATGGAAATCCTAACGGGGATCCTGA
TGCTGGCAATATGCCAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csd1 Family Protein; CRISPR-Associated RAMP Csd1 Family Protein; Csd1 Family CRISPR-Associated Protein; Crispr-Protein; CRISPR-Associated Protein Csd2 Family; CRISPR-Associated Protein; Crispr-Associated Protein Csd1 Family

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MILQALVKEYENLAENNLVPKRGWCQAKVSYAIDLNPNGKIKEIYPLKTEQTSGKKKVFLPVAKSVPEMVTRSSGVAANF
LCDNVKYMLGIDQNGTNARVQECFQAAKEKHLALLKNVDEPMANAICNFFNLWDPETAYDNACVREKSDELNEGGNVIFC
MGNDFAQDNDTIKKIWDNYVVHQTENTNDGICLATGEKTEIARIHRGIKGVPGAQTSGAALVSFNAPAFESYGKEQSYNA
PVGKNAEFAYTTALNYLLSNRDKIFQLGDSMVVYWAENGMEEYQKTFSFVMNPHVDNEEQLQRIFDSLKKSRYVDVDNVK
MDFEQSFYILCLAPNAARLSVRFFYQNTFGDILKNIKEHYKRLDIVKPLWVEKKYLSVYELLRETVNPNSKDKTPIPNMS
AMVLQSILSGNRYPASLYTDTVIRIRSEQGNVTWGRASIIKAYLIKNYSWKEGENYMGLEETCNDTAYVLGRLFSVLESI
QKEANQGINATIKDRYFNSACATPASVFPILFKLENSHIKKLEREKGSGSKIFYEKIIGNLMEKLVLFPRSLSLEEQGKF
MLGYYHQTQKKYEKKENK

Sequences:

>Translated_578_residues
MILQALVKEYENLAENNLVPKRGWCQAKVSYAIDLNPNGKIKEIYPLKTEQTSGKKKVFLPVAKSVPEMVTRSSGVAANF
LCDNVKYMLGIDQNGTNARVQECFQAAKEKHLALLKNVDEPMANAICNFFNLWDPETAYDNACVREKSDELNEGGNVIFC
MGNDFAQDNDTIKKIWDNYVVHQTENTNDGICLATGEKTEIARIHRGIKGVPGAQTSGAALVSFNAPAFESYGKEQSYNA
PVGKNAEFAYTTALNYLLSNRDKIFQLGDSMVVYWAENGMEEYQKTFSFVMNPHVDNEEQLQRIFDSLKKSRYVDVDNVK
MDFEQSFYILCLAPNAARLSVRFFYQNTFGDILKNIKEHYKRLDIVKPLWVEKKYLSVYELLRETVNPNSKDKTPIPNMS
AMVLQSILSGNRYPASLYTDTVIRIRSEQGNVTWGRASIIKAYLIKNYSWKEGENYMGLEETCNDTAYVLGRLFSVLESI
QKEANQGINATIKDRYFNSACATPASVFPILFKLENSHIKKLEREKGSGSKIFYEKIIGNLMEKLVLFPRSLSLEEQGKF
MLGYYHQTQKKYEKKENK
>Mature_578_residues
MILQALVKEYENLAENNLVPKRGWCQAKVSYAIDLNPNGKIKEIYPLKTEQTSGKKKVFLPVAKSVPEMVTRSSGVAANF
LCDNVKYMLGIDQNGTNARVQECFQAAKEKHLALLKNVDEPMANAICNFFNLWDPETAYDNACVREKSDELNEGGNVIFC
MGNDFAQDNDTIKKIWDNYVVHQTENTNDGICLATGEKTEIARIHRGIKGVPGAQTSGAALVSFNAPAFESYGKEQSYNA
PVGKNAEFAYTTALNYLLSNRDKIFQLGDSMVVYWAENGMEEYQKTFSFVMNPHVDNEEQLQRIFDSLKKSRYVDVDNVK
MDFEQSFYILCLAPNAARLSVRFFYQNTFGDILKNIKEHYKRLDIVKPLWVEKKYLSVYELLRETVNPNSKDKTPIPNMS
AMVLQSILSGNRYPASLYTDTVIRIRSEQGNVTWGRASIIKAYLIKNYSWKEGENYMGLEETCNDTAYVLGRLFSVLESI
QKEANQGINATIKDRYFNSACATPASVFPILFKLENSHIKKLEREKGSGSKIFYEKIIGNLMEKLVLFPRSLSLEEQGKF
MLGYYHQTQKKYEKKENK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65856; Mature: 65856

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILQALVKEYENLAENNLVPKRGWCQAKVSYAIDLNPNGKIKEIYPLKTEQTSGKKKVFL
CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEE
PVAKSVPEMVTRSSGVAANFLCDNVKYMLGIDQNGTNARVQECFQAAKEKHLALLKNVDE
HHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCH
PMANAICNFFNLWDPETAYDNACVREKSDELNEGGNVIFCMGNDFAQDNDTIKKIWDNYV
HHHHHHHHHHHCCCCCCHHCCHHHHCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCE
VHQTENTNDGICLATGEKTEIARIHRGIKGVPGAQTSGAALVSFNAPAFESYGKEQSYNA
EEECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCC
PVGKNAEFAYTTALNYLLSNRDKIFQLGDSMVVYWAENGMEEYQKTFSFVMNPHVDNEEQ
CCCCCCCCHHHHHHHHHHCCCCHHEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHH
LQRIFDSLKKSRYVDVDNVKMDFEQSFYILCLAPNAARLSVRFFYQNTFGDILKNIKEHY
HHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHH
KRLDIVKPLWVEKKYLSVYELLRETVNPNSKDKTPIPNMSAMVLQSILSGNRYPASLYTD
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHC
TVIRIRSEQGNVTWGRASIIKAYLIKNYSWKEGENYMGLEETCNDTAYVLGRLFSVLESI
EEEEEECCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH
QKEANQGINATIKDRYFNSACATPASVFPILFKLENSHIKKLEREKGSGSKIFYEKIIGN
HHHHCCCCCEEEHHHHCCHHHCCCHHHHHHHEEECCHHHHHHHHCCCCCCCHHHHHHHHH
LMEKLVLFPRSLSLEEQGKFMLGYYHQTQKKYEKKENK
HHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MILQALVKEYENLAENNLVPKRGWCQAKVSYAIDLNPNGKIKEIYPLKTEQTSGKKKVFL
CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEE
PVAKSVPEMVTRSSGVAANFLCDNVKYMLGIDQNGTNARVQECFQAAKEKHLALLKNVDE
HHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCH
PMANAICNFFNLWDPETAYDNACVREKSDELNEGGNVIFCMGNDFAQDNDTIKKIWDNYV
HHHHHHHHHHHCCCCCCHHCCHHHHCCCHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCE
VHQTENTNDGICLATGEKTEIARIHRGIKGVPGAQTSGAALVSFNAPAFESYGKEQSYNA
EEECCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCCC
PVGKNAEFAYTTALNYLLSNRDKIFQLGDSMVVYWAENGMEEYQKTFSFVMNPHVDNEEQ
CCCCCCCCHHHHHHHHHHCCCCHHEECCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHH
LQRIFDSLKKSRYVDVDNVKMDFEQSFYILCLAPNAARLSVRFFYQNTFGDILKNIKEHY
HHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHH
KRLDIVKPLWVEKKYLSVYELLRETVNPNSKDKTPIPNMSAMVLQSILSGNRYPASLYTD
HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHC
TVIRIRSEQGNVTWGRASIIKAYLIKNYSWKEGENYMGLEETCNDTAYVLGRLFSVLESI
EEEEEECCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHH
QKEANQGINATIKDRYFNSACATPASVFPILFKLENSHIKKLEREKGSGSKIFYEKIIGN
HHHHCCCCCEEEHHHHCCHHHCCCHHHHHHHEEECCHHHHHHHHCCCCCCCHHHHHHHHH
LMEKLVLFPRSLSLEEQGKFMLGYYHQTQKKYEKKENK
HHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA