| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238924831
Identifier: 238924831
GI number: 238924831
Start: 2351084
End: 2352517
Strand: Reverse
Name: 238924831
Synonym: EUBREC_2482
Alternate gene names: NA
Gene position: 2352517-2351084 (Counterclockwise)
Preceding gene: 238924836
Following gene: 238924830
Centisome position: 68.2
GC content: 36.19
Gene sequence:
>1434_bases ATGGCCATGGATATGCTTTCAGCATATTATGGTCGAAAGACTGATGCAGAAAATTTATTTAAAGGCCTTAAAATAAGTCA TGATGAGTCGTATGACAGACATATTAACAAGTATGATGTACTCAAAATTAATATGCAGGACTTTTTGAGTGTTACACACA GTGTTGATGATATGCTTAAAATGTTGTGCGAATACATTACGGATGATTTTTCAATAGAGTGTAAGGATATTATTTTTCGG GACAAGTCAAATATTGTGAGAGTAATGCAGGATGTTTTTATGTCTACAGGCAGGCCGTTTGTGATTCTTATTGATGAATG GGATTGTCTGTTTAGAGAATTTACGCAGGATAAAGAAGCGCAGAAGAAATACCTTGATTTTTTGAGAGGCTGGCTTAAGG ATAAAGACTATATAGCGCTTGCATACATGACAGGTATACTGCCGATTAAAAAATATGGTTCACATTCTGCTCTTAATATG TTCACGGAATATTCCATGACAGATATGGGAGCTTTGGCAGAGTACTTTGGCTTTACAGATGATGAGGTCAGAGAATTGTG TGACAGATATGATATGGACTTTGAAGAGGCAAGGGCATGGTACAATGGATATAAGCTCGTGTCCCATAGCAAATATGGAG TAAAGAAATATGCGATGTACAGTCCGAAGTCTGTAGTAGAAGCCATGCTAAAGCATAAATTTGGTACTTATTGGAATCAG ACTGAAACTTACGAGGCTCTCAAGGTTTATATTCAAATGAATATGGATGGTCTAAAAGATGCCGTGATTAAAATGCTTGC CGGTGAAAGTGAGAAAATAAATACAGGCACATTTGAAAATGACATGACATCATTTGCCACAAAGGATGATGTGCTTACAC TTTTAGTACATCTTGGCTACCTGACATATGATAGTGAGACGGAAGAGGTTTCAATTCCAAATCGAGAGGTGTCAAAGGAA TATCTTAATGCAATTAGTACAATGGATTGGGATGAAGTATCAAAATCAATAAAAGCATCACAAAAATTGCTTGAGAGTTT GTGGAATATGAATGGTGCTGCGGTTGCTGACGGAATTGATAAGGCACATAATGAGATATCTATTTTACGGTATAATGATG AGAATTCTTTAAGCTGTACAATTAATTTGGCATTTTATTCGGCCAGGGAGTATTACTCAATAGTTCGTGAATTACCAACA GGAAAAGGCTTTGCTGATGTATGCTTTATTCCAAGAGTGAGTCATTTGGATAAGCCGGCAGTTGTTATTGAATTGAAATA TGATAAGAATGTTGATGGCGCCATTTCACAGATAAAGTCGAGACAGTATGTGGAAGCCTTGAAGGATTATAAGGGTAATT TGCTTCTTGTTGGAATAAATTACGATAAAAAGACAAAAGAACATCAATGTGTGATTGAAAAATGGAAGCTGTAA
Upstream 100 bases:
>100_bases TTTTGTTGACAAAAGCGGTCTGATTAAAGAAACGAATAAGTGTATAAATACATTACAAAGGTATATGTGTGTAAGCCGTC CAAGGCGATTCGGAAAGTCA
Downstream 100 bases:
>100_bases AGGTGAAATTAGCAGGGAGTATAGCAACAATTAATGCTATACTCCCTGCTATTATATTTTTGGTTGCAAGAATTTAGTTT ATGCTATAAAATATTTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MAMDMLSAYYGRKTDAENLFKGLKISHDESYDRHINKYDVLKINMQDFLSVTHSVDDMLKMLCEYITDDFSIECKDIIFR DKSNIVRVMQDVFMSTGRPFVILIDEWDCLFREFTQDKEAQKKYLDFLRGWLKDKDYIALAYMTGILPIKKYGSHSALNM FTEYSMTDMGALAEYFGFTDDEVRELCDRYDMDFEEARAWYNGYKLVSHSKYGVKKYAMYSPKSVVEAMLKHKFGTYWNQ TETYEALKVYIQMNMDGLKDAVIKMLAGESEKINTGTFENDMTSFATKDDVLTLLVHLGYLTYDSETEEVSIPNREVSKE YLNAISTMDWDEVSKSIKASQKLLESLWNMNGAAVADGIDKAHNEISILRYNDENSLSCTINLAFYSAREYYSIVRELPT GKGFADVCFIPRVSHLDKPAVVIELKYDKNVDGAISQIKSRQYVEALKDYKGNLLLVGINYDKKTKEHQCVIEKWKL
Sequences:
>Translated_477_residues MAMDMLSAYYGRKTDAENLFKGLKISHDESYDRHINKYDVLKINMQDFLSVTHSVDDMLKMLCEYITDDFSIECKDIIFR DKSNIVRVMQDVFMSTGRPFVILIDEWDCLFREFTQDKEAQKKYLDFLRGWLKDKDYIALAYMTGILPIKKYGSHSALNM FTEYSMTDMGALAEYFGFTDDEVRELCDRYDMDFEEARAWYNGYKLVSHSKYGVKKYAMYSPKSVVEAMLKHKFGTYWNQ TETYEALKVYIQMNMDGLKDAVIKMLAGESEKINTGTFENDMTSFATKDDVLTLLVHLGYLTYDSETEEVSIPNREVSKE YLNAISTMDWDEVSKSIKASQKLLESLWNMNGAAVADGIDKAHNEISILRYNDENSLSCTINLAFYSAREYYSIVRELPT GKGFADVCFIPRVSHLDKPAVVIELKYDKNVDGAISQIKSRQYVEALKDYKGNLLLVGINYDKKTKEHQCVIEKWKL >Mature_476_residues AMDMLSAYYGRKTDAENLFKGLKISHDESYDRHINKYDVLKINMQDFLSVTHSVDDMLKMLCEYITDDFSIECKDIIFRD KSNIVRVMQDVFMSTGRPFVILIDEWDCLFREFTQDKEAQKKYLDFLRGWLKDKDYIALAYMTGILPIKKYGSHSALNMF TEYSMTDMGALAEYFGFTDDEVRELCDRYDMDFEEARAWYNGYKLVSHSKYGVKKYAMYSPKSVVEAMLKHKFGTYWNQT ETYEALKVYIQMNMDGLKDAVIKMLAGESEKINTGTFENDMTSFATKDDVLTLLVHLGYLTYDSETEEVSIPNREVSKEY LNAISTMDWDEVSKSIKASQKLLESLWNMNGAAVADGIDKAHNEISILRYNDENSLSCTINLAFYSAREYYSIVRELPTG KGFADVCFIPRVSHLDKPAVVIELKYDKNVDGAISQIKSRQYVEALKDYKGNLLLVGINYDKKTKEHQCVIEKWKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55283; Mature: 55151
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMDMLSAYYGRKTDAENLFKGLKISHDESYDRHINKYDVLKINMQDFLSVTHSVDDMLK CCHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHCCCCEEEEEECHHHHHHHHHHHHHHHH MLCEYITDDFSIECKDIIFRDKSNIVRVMQDVFMSTGRPFVILIDEWDCLFREFTQDKEA HHHHHHCCCCCEEEHHHEEECHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHH QKKYLDFLRGWLKDKDYIALAYMTGILPIKKYGSHSALNMFTEYSMTDMGALAEYFGFTD HHHHHHHHHHHHCCCCEEEEEHHHHCHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHCCCC DEVRELCDRYDMDFEEARAWYNGYKLVSHSKYGVKKYAMYSPKSVVEAMLKHKFGTYWNQ HHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCC TETYEALKVYIQMNMDGLKDAVIKMLAGESEKINTGTFENDMTSFATKDDVLTLLVHLGY CHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTYDSETEEVSIPNREVSKEYLNAISTMDWDEVSKSIKASQKLLESLWNMNGAAVADGID HEECCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KAHNEISILRYNDENSLSCTINLAFYSAREYYSIVRELPTGKGFADVCFIPRVSHLDKPA HCCCCEEEEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCCHHEECCCCCCCCCCE VVIELKYDKNVDGAISQIKSRQYVEALKDYKGNLLLVGINYDKKTKEHQCVIEKWKL EEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCC >Mature Secondary Structure AMDMLSAYYGRKTDAENLFKGLKISHDESYDRHINKYDVLKINMQDFLSVTHSVDDMLK CHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHCCCCEEEEEECHHHHHHHHHHHHHHHH MLCEYITDDFSIECKDIIFRDKSNIVRVMQDVFMSTGRPFVILIDEWDCLFREFTQDKEA HHHHHHCCCCCEEEHHHEEECHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCHHH QKKYLDFLRGWLKDKDYIALAYMTGILPIKKYGSHSALNMFTEYSMTDMGALAEYFGFTD HHHHHHHHHHHHCCCCEEEEEHHHHCHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHCCCC DEVRELCDRYDMDFEEARAWYNGYKLVSHSKYGVKKYAMYSPKSVVEAMLKHKFGTYWNQ HHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCC TETYEALKVYIQMNMDGLKDAVIKMLAGESEKINTGTFENDMTSFATKDDVLTLLVHLGY CHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LTYDSETEEVSIPNREVSKEYLNAISTMDWDEVSKSIKASQKLLESLWNMNGAAVADGID HEECCCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH KAHNEISILRYNDENSLSCTINLAFYSAREYYSIVRELPTGKGFADVCFIPRVSHLDKPA HCCCCEEEEEECCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCCCCHHEECCCCCCCCCCE VVIELKYDKNVDGAISQIKSRQYVEALKDYKGNLLLVGINYDKKTKEHQCVIEKWKL EEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA