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The map label for this gene is pyrK [H]

Identifier: 238924829

GI number: 238924829

Start: 2349069

End: 2349995

Strand: Reverse

Name: pyrK [H]

Synonym: EUBREC_2480

Alternate gene names: 238924829

Gene position: 2349995-2349069 (Counterclockwise)

Preceding gene: 238924830

Following gene: 238924828

Centisome position: 68.12

GC content: 46.17

Gene sequence:

>927_bases
TTGCAAATCGTTAATAAGTTATTCAGAAAGCTTAAATATATTAACAAACGAAACCAGGGAGATAAAATGGCAGAGAAATT
TGAGGAGATTGCAGTTGTAGTTGACCAGAGCTCACTCGGCAATGGCATCTACGACCTCACACTAAAGACAGACAAAATTG
CAAAGGCAGCAAAGGCGGGACAGTTTGTATCGGTTTACTCAAACGACAAGAGTAAGCTGCTTCCGCGTCCGATAAGCCTT
TGCGGCATAAACAGAGATGATGACACAATTCGTCTCGTGTACCGTGTGACAGGTGAAGGCACGGGAACAGAGGAATTTTC
AAAGCTTGTCAGGGGCGATAAGGTAAGGATTTTAGGACCTCTTGGAAACGGCTTTACAGTGCAGCCGGGAAAGAAGGCAT
TTCTTATCGGAGGAGGAATCGGAGTGCCGCCTATGCTGCAGCTTGCCAAGGATATAAATGCAGGCATTGTGCAGACATCA
GGTGAAGAAAAAAATTCGGAACAGGCAGCAATGGAAGGTGAAGAAATTAAAACAGCAGTATGCGATATGAACATCGTCAT
GGGCTATCGCGATGAGAATACCTTCCTGCTCGATGAGTTTAAGGAACAGGCAGCTTCCTTTGTAGCTACAGAGGACGGCA
GTGTCGGCACAAAGGGCAATGTCATCGATGCAATAAAGGAGAATGCTCTTGAGGCAGACGTGATTTATGCATGTGGACCT
ATGCCTATGCTTCGTGCACTCAAGGCTTACGCTGCAGAGCATGATATGGACTGCTTTATATCAATGGAGGAGCGCATGGC
ATGTGGAATCGGTGCATGCCTTGCGTGCGTATGCAAAACAAAGGACAAGGATGCCCACAGCAATGTAAACAACAAGCGTA
TATGCAAAGAGGGACCTGTTTTTGATGCGAAGGAGGTGGAGCTGTAA

Upstream 100 bases:

>100_bases
AAGCAGGATAAGTACAAGGATATGGGCATCACAGCAGAGAATTTTGCAGATGCATCACGCAAGGCTGTTGAGGATATGAT
TGAGGATATCTCAGGAGCAC

Downstream 100 bases:

>100_bases
TGAGTAATATGTCAGTAAATGTGGCCGGTGTTGAGTGGAAAAATCCTGTTACAGTTGCATCCGGCACATTCGGCTCCGGT
GCAGAGTACAGCGAGTTTGT

Product: dihydroorotate dehydrogenase electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MQIVNKLFRKLKYINKRNQGDKMAEKFEEIAVVVDQSSLGNGIYDLTLKTDKIAKAAKAGQFVSVYSNDKSKLLPRPISL
CGINRDDDTIRLVYRVTGEGTGTEEFSKLVRGDKVRILGPLGNGFTVQPGKKAFLIGGGIGVPPMLQLAKDINAGIVQTS
GEEKNSEQAAMEGEEIKTAVCDMNIVMGYRDENTFLLDEFKEQAASFVATEDGSVGTKGNVIDAIKENALEADVIYACGP
MPMLRALKAYAAEHDMDCFISMEERMACGIGACLACVCKTKDKDAHSNVNNKRICKEGPVFDAKEVEL

Sequences:

>Translated_308_residues
MQIVNKLFRKLKYINKRNQGDKMAEKFEEIAVVVDQSSLGNGIYDLTLKTDKIAKAAKAGQFVSVYSNDKSKLLPRPISL
CGINRDDDTIRLVYRVTGEGTGTEEFSKLVRGDKVRILGPLGNGFTVQPGKKAFLIGGGIGVPPMLQLAKDINAGIVQTS
GEEKNSEQAAMEGEEIKTAVCDMNIVMGYRDENTFLLDEFKEQAASFVATEDGSVGTKGNVIDAIKENALEADVIYACGP
MPMLRALKAYAAEHDMDCFISMEERMACGIGACLACVCKTKDKDAHSNVNNKRICKEGPVFDAKEVEL
>Mature_308_residues
MQIVNKLFRKLKYINKRNQGDKMAEKFEEIAVVVDQSSLGNGIYDLTLKTDKIAKAAKAGQFVSVYSNDKSKLLPRPISL
CGINRDDDTIRLVYRVTGEGTGTEEFSKLVRGDKVRILGPLGNGFTVQPGKKAFLIGGGIGVPPMLQLAKDINAGIVQTS
GEEKNSEQAAMEGEEIKTAVCDMNIVMGYRDENTFLLDEFKEQAASFVATEDGSVGTKGNVIDAIKENALEADVIYACGP
MPMLRALKAYAAEHDMDCFISMEERMACGIGACLACVCKTKDKDAHSNVNNKRICKEGPVFDAKEVEL

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 33565; Mature: 33565

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIVNKLFRKLKYINKRNQGDKMAEKFEEIAVVVDQSSLGNGIYDLTLKTDKIAKAAKAG
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCEEEEEECHHHHHHHHHCC
QFVSVYSNDKSKLLPRPISLCGINRDDDTIRLVYRVTGEGTGTEEFSKLVRGDKVRILGP
CEEEEEECCCHHCCCCCHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEC
LGNGFTVQPGKKAFLIGGGIGVPPMLQLAKDINAGIVQTSGEEKNSEQAAMEGEEIKTAV
CCCCEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHCHHHHHHHH
CDMNIVMGYRDENTFLLDEFKEQAASFVATEDGSVGTKGNVIDAIKENALEADVIYACGP
HCEEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCC
MPMLRALKAYAAEHDMDCFISMEERMACGIGACLACVCKTKDKDAHSNVNNKRICKEGPV
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
FDAKEVEL
CCCCCCCC
>Mature Secondary Structure
MQIVNKLFRKLKYINKRNQGDKMAEKFEEIAVVVDQSSLGNGIYDLTLKTDKIAKAAKAG
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEECCCCCCCEEEEEECHHHHHHHHHCC
QFVSVYSNDKSKLLPRPISLCGINRDDDTIRLVYRVTGEGTGTEEFSKLVRGDKVRILGP
CEEEEEECCCHHCCCCCHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEC
LGNGFTVQPGKKAFLIGGGIGVPPMLQLAKDINAGIVQTSGEEKNSEQAAMEGEEIKTAV
CCCCEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHCHHHHHHHH
CDMNIVMGYRDENTFLLDEFKEQAASFVATEDGSVGTKGNVIDAIKENALEADVIYACGP
HCEEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCC
MPMLRALKAYAAEHDMDCFISMEERMACGIGACLACVCKTKDKDAHSNVNNKRICKEGPV
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
FDAKEVEL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA