| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is aroC
Identifier: 238924244
GI number: 238924244
Start: 1773559
End: 1774662
Strand: Direct
Name: aroC
Synonym: EUBREC_1882
Alternate gene names: 238924244
Gene position: 1773559-1774662 (Clockwise)
Preceding gene: 238924218
Following gene: 238924261
Centisome position: 51.41
GC content: 44.84
Gene sequence:
>1104_bases ATGGCAGGTTCATCATACGGAAATATTTTTAAGGTAACAACATGGGGAGAATCACACGGAAAGGGCTTAGGTGTCGTTGT GGACGGCGTTCCTGCGGGGCTTGAGCTGTGTGAGGAGGATATTCAGATATTCTTAAACAGAAGAAAGCCGGGACAGTCCA AGTTCACTACTCCACGCAAGGAGGATGATACGGTTGAAATTCTCTCCGGTGTGTTTGAGGGAAAGACTACAGGTACACCT GTTTCTATGGTTGTGTGGAATAAAAACCAGAAATCAAAGGATTACAGTGAGATTGCTTCATACTATCGTCCGGGACATGC TGACTTTTGCTTTGATGAGAAATACGGCTTCAGAGACTACAGAGGCGGAGGTCGTTCTTCGGGACGCGAGACAATAGGCC GTGTTGCAGCAGGTGCTATCGCTGTAAAGATGCTCTCGAGCCTTGGCATAAAATTTCTTACATACACCAGATCAATAGGT CCTGTTACAATTAATGAGGTTAATTTTGATGCCCATGAGATTTACAACAATTCACTTTATATGCCTGATTCCGATGCAGC ACAAAAGGCTTCTGAATATCTGGATGAATGCCTTAAATCACTCAATTCCTCAGGCGGTGTGTGTGAATGTGTAATCACAG GTCTTCCTGTCGGGCTCGGTGATCCTGTATTCGAGAAAATTGATGCCAATCTGGCAAAAGCTATTATGTCTATCGGAGCT GTAAAGGGCTTCGAAATCGGCGATGGCTTTGATGCAGCAAAGGCAACCGGACTTACAAACAATGATGCCTTTATTATGAT GGATGGCGCTGTTTCAAAAGAGACAAATCACTCCGGTGGTACTCTCGGCGGCATGACAGACGGCTCACCGCTTATTTTCA GAGCTGCCATAAAGCCTACTCCTTCAATCGCAGCTACACAGCACACTGTAAATAAATCCGGTGAAGATATAGAGATTTCC ATCAAGGGACGTCATGACCCGATTATCGTGCCACGTGCTGTTGTTGTTGTTGAAGCTATGGCTGCAATTACTATTGCGGA TGCACTGCTTATGAATATGGGGGCACGCATGGACCGCATCACAGATTTTTATAAAAAATTATAA
Upstream 100 bases:
>100_bases CATTGAAAACCAAAAATGCTGTTTACATGCAAGCATGATGTATCATTTTTTGTTCTCAGAGGTTTAAATAGTTACCCATT ATTATAATAAGGAGACCATC
Downstream 100 bases:
>100_bases CTTTGTCCTATAGTAAAAAGCATCTATCCGGTTTTCCAGACAGATGCTTTTTATCTATTTCATTGGAACAATCTGTAATG TTTTTCCTAGTGAATTCAAA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MAGSSYGNIFKVTTWGESHGKGLGVVVDGVPAGLELCEEDIQIFLNRRKPGQSKFTTPRKEDDTVEILSGVFEGKTTGTP VSMVVWNKNQKSKDYSEIASYYRPGHADFCFDEKYGFRDYRGGGRSSGRETIGRVAAGAIAVKMLSSLGIKFLTYTRSIG PVTINEVNFDAHEIYNNSLYMPDSDAAQKASEYLDECLKSLNSSGGVCECVITGLPVGLGDPVFEKIDANLAKAIMSIGA VKGFEIGDGFDAAKATGLTNNDAFIMMDGAVSKETNHSGGTLGGMTDGSPLIFRAAIKPTPSIAATQHTVNKSGEDIEIS IKGRHDPIIVPRAVVVVEAMAAITIADALLMNMGARMDRITDFYKKL
Sequences:
>Translated_367_residues MAGSSYGNIFKVTTWGESHGKGLGVVVDGVPAGLELCEEDIQIFLNRRKPGQSKFTTPRKEDDTVEILSGVFEGKTTGTP VSMVVWNKNQKSKDYSEIASYYRPGHADFCFDEKYGFRDYRGGGRSSGRETIGRVAAGAIAVKMLSSLGIKFLTYTRSIG PVTINEVNFDAHEIYNNSLYMPDSDAAQKASEYLDECLKSLNSSGGVCECVITGLPVGLGDPVFEKIDANLAKAIMSIGA VKGFEIGDGFDAAKATGLTNNDAFIMMDGAVSKETNHSGGTLGGMTDGSPLIFRAAIKPTPSIAATQHTVNKSGEDIEIS IKGRHDPIIVPRAVVVVEAMAAITIADALLMNMGARMDRITDFYKKL >Mature_366_residues AGSSYGNIFKVTTWGESHGKGLGVVVDGVPAGLELCEEDIQIFLNRRKPGQSKFTTPRKEDDTVEILSGVFEGKTTGTPV SMVVWNKNQKSKDYSEIASYYRPGHADFCFDEKYGFRDYRGGGRSSGRETIGRVAAGAIAVKMLSSLGIKFLTYTRSIGP VTINEVNFDAHEIYNNSLYMPDSDAAQKASEYLDECLKSLNSSGGVCECVITGLPVGLGDPVFEKIDANLAKAIMSIGAV KGFEIGDGFDAAKATGLTNNDAFIMMDGAVSKETNHSGGTLGGMTDGSPLIFRAAIKPTPSIAATQHTVNKSGEDIEISI KGRHDPIIVPRAVVVVEAMAAITIADALLMNMGARMDRITDFYKKL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=366, Percent_Identity=46.9945355191257, Blast_Score=315, Evalue=4e-87, Organism=Saccharomyces cerevisiae, GI6321290, Length=371, Percent_Identity=42.8571428571429, Blast_Score=306, Evalue=4e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_EUBR3 (C4ZAX1)
Other databases:
- EMBL: CP001107 - RefSeq: YP_002937760.1 - ProteinModelPortal: C4ZAX1 - GeneID: 7964077 - GenomeReviews: CP001107_GR - KEGG: ere:EUBREC_1882 - ProtClustDB: PRK05382 - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 39323; Mature: 39192
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSSYGNIFKVTTWGESHGKGLGVVVDGVPAGLELCEEDIQIFLNRRKPGQSKFTTPRK CCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EDDTVEILSGVFEGKTTGTPVSMVVWNKNQKSKDYSEIASYYRPGHADFCFDEKYGFRDY CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCC RGGGRSSGRETIGRVAAGAIAVKMLSSLGIKFLTYTRSIGPVTINEVNFDAHEIYNNSLY CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHHHHCCCCEE MPDSDAAQKASEYLDECLKSLNSSGGVCECVITGLPVGLGDPVFEKIDANLAKAIMSIGA CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHC VKGFEIGDGFDAAKATGLTNNDAFIMMDGAVSKETNHSGGTLGGMTDGSPLIFRAAIKPT CCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCEEEEEECCCC PSIAATQHTVNKSGEDIEISIKGRHDPIIVPRAVVVVEAMAAITIADALLMNMGARMDRI CCCHHHHHHHCCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TDFYKKL HHHHHCC >Mature Secondary Structure AGSSYGNIFKVTTWGESHGKGLGVVVDGVPAGLELCEEDIQIFLNRRKPGQSKFTTPRK CCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EDDTVEILSGVFEGKTTGTPVSMVVWNKNQKSKDYSEIASYYRPGHADFCFDEKYGFRDY CCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCC RGGGRSSGRETIGRVAAGAIAVKMLSSLGIKFLTYTRSIGPVTINEVNFDAHEIYNNSLY CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEECCCCHHHHCCCCEE MPDSDAAQKASEYLDECLKSLNSSGGVCECVITGLPVGLGDPVFEKIDANLAKAIMSIGA CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHC VKGFEIGDGFDAAKATGLTNNDAFIMMDGAVSKETNHSGGTLGGMTDGSPLIFRAAIKPT CCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCEEEEEECCCC PSIAATQHTVNKSGEDIEISIKGRHDPIIVPRAVVVVEAMAAITIADALLMNMGARMDRI CCCHHHHHHHCCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH TDFYKKL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA