| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238924052
Identifier: 238924052
GI number: 238924052
Start: 1573032
End: 1574894
Strand: Direct
Name: 238924052
Synonym: EUBREC_1690
Alternate gene names: NA
Gene position: 1573032-1574894 (Clockwise)
Preceding gene: 238924051
Following gene: 238924053
Centisome position: 45.6
GC content: 44.44
Gene sequence:
>1863_bases ATGAGAAAACTAGCTTTAAGTGATGAGATACTTATGAAGGTAGACAAACCGGCTAGATATATCGGGAATGAGTTCAACTC AGTAATGAAAGACACATCGCAGGTAAATATACGTTTTGCGATGTGTTTTCCTGATGTTTATGAGATTGGTATGTCACATC TGGGAATCCAGATATTATATGATATGTTCAACCGCATGGATGACGTGTGGTGCGAGAGAGTTTATTCTCCGTGGCCTGAT CTGCATGAAATCATGAAGCAGGAGAATATACCGCTTTTCGGACTTGAGTCGCAGGAGCCTATAAAAGACTTTGACTTTGT AGCCATGACGCTGCAGTATGAGATGTGCTACACAAATATTTTGCAGATACTTGACCTCGCACAGATACCGCTTCGTTCAA GGGATAGAGCGGAAGGCTGTCCTATTGTGATTGCAGGTGGTCCATGTACCTACAATCCGGAGCCGATTGCAGACTTCTTT GATATATTTTATATCGGAGAGGGTGAGACACAGTACGGCAATCTTTTTGAGCTTTATAAGAAGGCAAAGGCTGATGGACT TTCAAGGGAAGAGTTTTTACATGAGGCTGCAAAGATTGAGGGTCTTTATGTACCTGCTTTGTATGAGGTGGAGTACAATG AGGATGGAACAATTTGCTGCATGAAGCCTAAGTATGATGATATTCCGGTAAAGATAAAAAAGCAGGTGCAGGTAGATTTG ACTAACTCAACCTACCCGGAGGCACCGGTTGTGCCTTTTATCAAGGCTACGCAGGATAGAATGGTGCTTGAAATACAGCG TGGCTGTATAAGAGGCTGCCGTTTCTGTCAGGCCGGTATGATTTACCGCCCAAACCGTGAGAAAAAGGTTGACCACTTAA AGGACGTTGCAGCGGCTCTTATCAAAAATACAGGACACGAGGAGATTTCTTTAAGCTCCTTAAGCTCATCCGACTACAAG GAGCTTGACGAGCTCATCACATTTTTGCTTGATATCTGCAAGGAAAAGAAGATAAATATCTCCCTGCCTTCACTCAGAAT TGATGCGTTTTCGCTCGATATCATGCAGAAGGTGCAGGATGTCAAAAAAAGCAGTCTGACCTTTGCGCCTGAGGCCGGTA CACAGCGCCTTAGAAATGTCATTAACAAGGGACTTACCGTGGATGATATCATGAACGGCTCAAAACAGGCATTTGAGGGC GGCTGGAACAAGGTGAAGTTTTATTTCATGCTCGGTCTGCCTACAGAGACAGAGGAAGATATGAGGGGCATTCCTGAGCT TGCAAACGATGTGGCGGCATTGTACTATGATACCGTTCCAAAGGAAAAGAGAGCCGGAAAATGCCAGATTACGATAAGTA CATCATTTTTCGTGCCAAAGCCTTTTACACCATTCCAGTGGGCGAGAATGTATGAGCCTTCTGAGTATCTGGGCAGAGCC AAAATAGTAAATGACCATGTAAAGGAGCAGCTCAACAGAAAGAGCATCAGATACAACTGGCATGAGGCCTATGTCACTGT GATAGAGGGCATACTTGCAAGAGGCGACAGAAGGCTTTGCGATGCGATAGTAAAGGTATACGAAAAGGGCGGATATTATG ATGCCTGGACAGAGTATTTTGACTATGACAGATGGATTGATTCGATAAAGGAATGCGGACTGGATCCGGATTTCTACACG ATGAGAGAAAGGCCTTTAGATGAAGTATTCCCATGGGATTTTATCGATATAGGTGTGACAAAGCAGTTTATGATAAGAGA GTGGGAGACAGCCCATAAGGAGACAGTCACTCCTAACTGCCGCATGAGGTGCTCTGCCTGCGGTGCAAAGAGCTATGGAG GAGGTGTCTGCTATGAAAATTAG
Upstream 100 bases:
>100_bases ATGATTCTTATGGCTCAGAAAAATATCACATGGGCAGAGATAGCAGGGGAGCTGGCACAGCGATAGCCTTAAAACACAAT AATTATTTAGAGGAAATTAT
Downstream 100 bases:
>100_bases AGTGAAGTTTAAAAAATGGGGCTGCATGAAGTTTATAGGACATCTCGATATGATGAGATACTTCCAGAAGGCGGTCAGAA GGGCAGATATTGATATCCGC
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MRKLALSDEILMKVDKPARYIGNEFNSVMKDTSQVNIRFAMCFPDVYEIGMSHLGIQILYDMFNRMDDVWCERVYSPWPD LHEIMKQENIPLFGLESQEPIKDFDFVAMTLQYEMCYTNILQILDLAQIPLRSRDRAEGCPIVIAGGPCTYNPEPIADFF DIFYIGEGETQYGNLFELYKKAKADGLSREEFLHEAAKIEGLYVPALYEVEYNEDGTICCMKPKYDDIPVKIKKQVQVDL TNSTYPEAPVVPFIKATQDRMVLEIQRGCIRGCRFCQAGMIYRPNREKKVDHLKDVAAALIKNTGHEEISLSSLSSSDYK ELDELITFLLDICKEKKINISLPSLRIDAFSLDIMQKVQDVKKSSLTFAPEAGTQRLRNVINKGLTVDDIMNGSKQAFEG GWNKVKFYFMLGLPTETEEDMRGIPELANDVAALYYDTVPKEKRAGKCQITISTSFFVPKPFTPFQWARMYEPSEYLGRA KIVNDHVKEQLNRKSIRYNWHEAYVTVIEGILARGDRRLCDAIVKVYEKGGYYDAWTEYFDYDRWIDSIKECGLDPDFYT MRERPLDEVFPWDFIDIGVTKQFMIREWETAHKETVTPNCRMRCSACGAKSYGGGVCYEN
Sequences:
>Translated_620_residues MRKLALSDEILMKVDKPARYIGNEFNSVMKDTSQVNIRFAMCFPDVYEIGMSHLGIQILYDMFNRMDDVWCERVYSPWPD LHEIMKQENIPLFGLESQEPIKDFDFVAMTLQYEMCYTNILQILDLAQIPLRSRDRAEGCPIVIAGGPCTYNPEPIADFF DIFYIGEGETQYGNLFELYKKAKADGLSREEFLHEAAKIEGLYVPALYEVEYNEDGTICCMKPKYDDIPVKIKKQVQVDL TNSTYPEAPVVPFIKATQDRMVLEIQRGCIRGCRFCQAGMIYRPNREKKVDHLKDVAAALIKNTGHEEISLSSLSSSDYK ELDELITFLLDICKEKKINISLPSLRIDAFSLDIMQKVQDVKKSSLTFAPEAGTQRLRNVINKGLTVDDIMNGSKQAFEG GWNKVKFYFMLGLPTETEEDMRGIPELANDVAALYYDTVPKEKRAGKCQITISTSFFVPKPFTPFQWARMYEPSEYLGRA KIVNDHVKEQLNRKSIRYNWHEAYVTVIEGILARGDRRLCDAIVKVYEKGGYYDAWTEYFDYDRWIDSIKECGLDPDFYT MRERPLDEVFPWDFIDIGVTKQFMIREWETAHKETVTPNCRMRCSACGAKSYGGGVCYEN >Mature_620_residues MRKLALSDEILMKVDKPARYIGNEFNSVMKDTSQVNIRFAMCFPDVYEIGMSHLGIQILYDMFNRMDDVWCERVYSPWPD LHEIMKQENIPLFGLESQEPIKDFDFVAMTLQYEMCYTNILQILDLAQIPLRSRDRAEGCPIVIAGGPCTYNPEPIADFF DIFYIGEGETQYGNLFELYKKAKADGLSREEFLHEAAKIEGLYVPALYEVEYNEDGTICCMKPKYDDIPVKIKKQVQVDL TNSTYPEAPVVPFIKATQDRMVLEIQRGCIRGCRFCQAGMIYRPNREKKVDHLKDVAAALIKNTGHEEISLSSLSSSDYK ELDELITFLLDICKEKKINISLPSLRIDAFSLDIMQKVQDVKKSSLTFAPEAGTQRLRNVINKGLTVDDIMNGSKQAFEG GWNKVKFYFMLGLPTETEEDMRGIPELANDVAALYYDTVPKEKRAGKCQITISTSFFVPKPFTPFQWARMYEPSEYLGRA KIVNDHVKEQLNRKSIRYNWHEAYVTVIEGILARGDRRLCDAIVKVYEKGGYYDAWTEYFDYDRWIDSIKECGLDPDFYT MRERPLDEVFPWDFIDIGVTKQFMIREWETAHKETVTPNCRMRCSACGAKSYGGGVCYEN
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 71521; Mature: 71521
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLALSDEILMKVDKPARYIGNEFNSVMKDTSQVNIRFAMCFPDVYEIGMSHLGIQILY CCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHH DMFNRMDDVWCERVYSPWPDLHEIMKQENIPLFGLESQEPIKDFDFVAMTLQYEMCYTNI HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHEEHHHHHHHHHHHH LQILDLAQIPLRSRDRAEGCPIVIAGGPCTYNPEPIADFFDIFYIGEGETQYGNLFELYK HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHEEEEEECCCCCCCCHHHHHHH KAKADGLSREEFLHEAAKIEGLYVPALYEVEYNEDGTICCMKPKYDDIPVKIKKQVQVDL HHHCCCCCHHHHHHHHHHCCCEEECEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEEEE TNSTYPEAPVVPFIKATQDRMVLEIQRGCIRGCRFCQAGMIYRPNREKKVDHLKDVAAAL CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHH IKNTGHEEISLSSLSSSDYKELDELITFLLDICKEKKINISLPSLRIDAFSLDIMQKVQD HHCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCEEEHHHHHHHHHHHHH VKKSSLTFAPEAGTQRLRNVINKGLTVDDIMNGSKQAFEGGWNKVKFYFMLGLPTETEED HHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCCCEEEEEEEEECCCCCHHH MRGIPELANDVAALYYDTVPKEKRAGKCQITISTSFFVPKPFTPFQWARMYEPSEYLGRA HCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHH KIVNDHVKEQLNRKSIRYNWHEAYVTVIEGILARGDRRLCDAIVKVYEKGGYYDAWTEYF HHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH DYDRWIDSIKECGLDPDFYTMRERPLDEVFPWDFIDIGVTKQFMIREWETAHKETVTPNC HHHHHHHHHHHCCCCCCHHHHHCCCHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCC RMRCSACGAKSYGGGVCYEN CEEEHHCCCCCCCCCCCCCC >Mature Secondary Structure MRKLALSDEILMKVDKPARYIGNEFNSVMKDTSQVNIRFAMCFPDVYEIGMSHLGIQILY CCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHH DMFNRMDDVWCERVYSPWPDLHEIMKQENIPLFGLESQEPIKDFDFVAMTLQYEMCYTNI HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHEEHHHHHHHHHHHH LQILDLAQIPLRSRDRAEGCPIVIAGGPCTYNPEPIADFFDIFYIGEGETQYGNLFELYK HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHEEEEEECCCCCCCCHHHHHHH KAKADGLSREEFLHEAAKIEGLYVPALYEVEYNEDGTICCMKPKYDDIPVKIKKQVQVDL HHHCCCCCHHHHHHHHHHCCCEEECEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEEEE TNSTYPEAPVVPFIKATQDRMVLEIQRGCIRGCRFCQAGMIYRPNREKKVDHLKDVAAAL CCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHH IKNTGHEEISLSSLSSSDYKELDELITFLLDICKEKKINISLPSLRIDAFSLDIMQKVQD HHCCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCEEEHHHHHHHHHHHHH VKKSSLTFAPEAGTQRLRNVINKGLTVDDIMNGSKQAFEGGWNKVKFYFMLGLPTETEED HHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHCCCCEEEEEEEEECCCCCHHH MRGIPELANDVAALYYDTVPKEKRAGKCQITISTSFFVPKPFTPFQWARMYEPSEYLGRA HCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHH KIVNDHVKEQLNRKSIRYNWHEAYVTVIEGILARGDRRLCDAIVKVYEKGGYYDAWTEYF HHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH DYDRWIDSIKECGLDPDFYTMRERPLDEVFPWDFIDIGVTKQFMIREWETAHKETVTPNC HHHHHHHHHHHCCCCCCHHHHHCCCHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCC RMRCSACGAKSYGGGVCYEN CEEEHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]