Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is 238923948

Identifier: 238923948

GI number: 238923948

Start: 1475103

End: 1475720

Strand: Direct

Name: 238923948

Synonym: EUBREC_1586

Alternate gene names: NA

Gene position: 1475103-1475720 (Clockwise)

Preceding gene: 238923947

Following gene: 238923949

Centisome position: 42.76

GC content: 43.85

Gene sequence:

>618_bases
ATGTGCCAGGAAGTATTTCAGATTGCTATGAGCATGGATTTAAAGAGCGTGGAAATGCAGCTTGCCCTCCAGTGTGCCCC
ACTAATTACAGGAGCGAGAATTTCAAATATGCTCATGATAGACAGCGCTGATGAGAGTGCCATGAGAGTGATTCTGAGGG
CTTCCGGGATATCGCATTTCAGGCTTGCAGCAAGGAATGAGAAAACCGCCTTCCTCTTATTCCGCAGGAGCCTCTTAGAA
GCATATCTGAATAATTCAGAGGCTTTGGACATACTAAAGAAAGCGGGATATGAGGATTTTTCATTCGGCAAGATATTACT
TAGATTCAAAAAACGCTACGAAGCGTATCTGAATGATGAACACAAGCAGTTTCCACATGAGATGGGGCTTTTGCTTGGAT
ATCCGATAGAGGATGTGAGAGGCTTTATAGAGCATAACGGATGCGGTTGCCTGTATTCAGGATACTGGAAGGTGTACCGC
AACGTACCACTCAAAAAGAAGATGTTTGAGGATTTTGAAAAGGCGAAGGAAAGTGTCATACAGCTATTGGCCGAGGACAT
AGATATGAGGCTGATACTGGAAATATATAAAGAAGAACCGCAGCAGATAGCGGTATAG

Upstream 100 bases:

>100_bases
GAATAAAAAGTGTAAAAATGGCAAAAAAATACTTGACATATAAGTATAAGTAAGATATATTTAACTCAGGTTAGAGACAA
CTAACACGAAAGGAGCTAAA

Downstream 100 bases:

>100_bases
GAGGAATTAAAATGAGCAAAATCAGTGTAGTTTATTGGTCACAGTCAGGCAATACAGCAGCAATGGCAGAGGCAGTTGCA
AAGGGCGTCACAGATGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MCQEVFQIAMSMDLKSVEMQLALQCAPLITGARISNMLMIDSADESAMRVILRASGISHFRLAARNEKTAFLLFRRSLLE
AYLNNSEALDILKKAGYEDFSFGKILLRFKKRYEAYLNDEHKQFPHEMGLLLGYPIEDVRGFIEHNGCGCLYSGYWKVYR
NVPLKKKMFEDFEKAKESVIQLLAEDIDMRLILEIYKEEPQQIAV

Sequences:

>Translated_205_residues
MCQEVFQIAMSMDLKSVEMQLALQCAPLITGARISNMLMIDSADESAMRVILRASGISHFRLAARNEKTAFLLFRRSLLE
AYLNNSEALDILKKAGYEDFSFGKILLRFKKRYEAYLNDEHKQFPHEMGLLLGYPIEDVRGFIEHNGCGCLYSGYWKVYR
NVPLKKKMFEDFEKAKESVIQLLAEDIDMRLILEIYKEEPQQIAV
>Mature_205_residues
MCQEVFQIAMSMDLKSVEMQLALQCAPLITGARISNMLMIDSADESAMRVILRASGISHFRLAARNEKTAFLLFRRSLLE
AYLNNSEALDILKKAGYEDFSFGKILLRFKKRYEAYLNDEHKQFPHEMGLLLGYPIEDVRGFIEHNGCGCLYSGYWKVYR
NVPLKKKMFEDFEKAKESVIQLLAEDIDMRLILEIYKEEPQQIAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23734; Mature: 23734

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQEVFQIAMSMDLKSVEMQLALQCAPLITGARISNMLMIDSADESAMRVILRASGISHF
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCCCHH
RLAARNEKTAFLLFRRSLLEAYLNNSEALDILKKAGYEDFSFGKILLRFKKRYEAYLNDE
HHECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCH
HKQFPHEMGLLLGYPIEDVRGFIEHNGCGCLYSGYWKVYRNVPLKKKMFEDFEKAKESVI
HHHCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QLLAEDIDMRLILEIYKEEPQQIAV
HHHHHHCCHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MCQEVFQIAMSMDLKSVEMQLALQCAPLITGARISNMLMIDSADESAMRVILRASGISHF
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCCCHH
RLAARNEKTAFLLFRRSLLEAYLNNSEALDILKKAGYEDFSFGKILLRFKKRYEAYLNDE
HHECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCH
HKQFPHEMGLLLGYPIEDVRGFIEHNGCGCLYSGYWKVYRNVPLKKKMFEDFEKAKESVI
HHHCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QLLAEDIDMRLILEIYKEEPQQIAV
HHHHHHCCHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA