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The map label for this gene is recQ [C]

Identifier: 238923919

GI number: 238923919

Start: 1439533

End: 1441476

Strand: Direct

Name: recQ [C]

Synonym: EUBREC_1557

Alternate gene names: 238923919

Gene position: 1439533-1441476 (Clockwise)

Preceding gene: 238923918

Following gene: 238923920

Centisome position: 41.73

GC content: 43.57

Gene sequence:

>1944_bases
ATGGAAAAATCGTTTGAAGAGATACTGGTACAGTTTTATGTTGACCAGTACAGGGAGAATGCGAAGAGAAGTACAGGTAA
GCCTGTAAAGCTGGCACACTATATTCACAGGCTCAATAGTAAAGCAAAATCAATTAAATATGCGCGATTTTCAAAAAATG
AGACTGTAGCACTTGACAAGCTGCATCAGGAAATAAAAAGGCTTGCATTGATTACCTACTATTCCAACAATAAGAACGCA
AGGCAGATTTTAAATAGAGAAATCCTTCCGCAGCTCGTCAGGGTGGATATGGAGCAGTTTGATGAGAAGGAGGCAGAGTA
TCTCACAGAGGATTTTCTAAAGCTTTTGCGCAAGGAGTATATAGGTGCGATATGTACCAGAAGCATGAAGGCGCTTTACA
ATGAGTACCGCAGCAAGGAGCTTAGAAGAGAGATTGTCACGTTGGTTCCGGCACGGCCGGAGCTTGAGTTTCCAAAAGCA
CAGAGCATGAAAAGGCACTTCATACTTCATATAGGCCCGACTAACAGCGGTAAGACATATCAGGCGCTTGAGAGGCTTAA
ACTGGCGCAAAACGGAGTTTATCTGGGACCTCTTAGACTTCTGGCACTTGAGGTATATGAGAAGATGAATGATGCAGGTA
TACCATGCACCATGCTTACAGGCCAGGAGTGTCTTGAGGTATCTGACAGCAGAATTACAGCATCGACAGTGGAGATGCTT
GACTGTGACAAGGAATATGATATCGCAGTGATTGATGAGGCACAGATGGTAGCAGATGATGACAGGGGACATTCGTGGAC
CAGGGCGATTCTTGGTACACTTGCAGGAGAGATTCATATATGCATGAGCCCGGTGGCAAAGGATGTAGTCATTCATCTGA
TTAATCTATGCCATGACGAGTATGAGATAAGGGAGTATGAGAGAAAGACAGCTCTAAAGCTGGAGGATAAGCCTTTTTCA
TTTCCACAGGATGTGAGAGAGGGCGATGCCTTTATCGTATTTTCAAAGAAGTCGGTACTCAATATAGCAGGGCGTCTGGA
GGAAAACGGCATAAAGCCAAGTGTCATATACGGAAGTCTGCCACCGGAAATAAGGCGCAGGCAGATGACGCTTTTTAATG
AGAAAAAGACACAGGTTGTCGTGTCAACAGATGCGATAGGAATGGGACTCAATCTGCCGGTCAGAAGAATTGTATTTCTG
GAGGTGGAAAAGTTTGATGGAGTATCAAGACGTCCGCTTGTCATCTCTGAGATAAAACAGATAGCGGGCCGTGCAGGCAG
ATTTGGTCTGTATGACACAGGCTATGTGACAGCTTTGGGACAAAAGAATCTGAGTTATTTGAAGAATACGCTAAATATAC
CGGAGCAGGATATTGATATAGTAAGTCTTGGCTTCCCACAGGTGCTCCTTACAATGGATGCGCCGCTTGATGCGATAATT
AAGCTCTGGCATGAGGCAGAGCCATCAGCACCGTTTAGGAAAATCAATGTCGATGAGATATTGTTTTTGTATGGATATGC
GTATAAGGAGCGATACTTTATCGCAGATTTTGATAACAAATATCTGCTTTATAAGATGATTACATGTCCTATAGATATAA
AGGACAGGGAGCTTGTCAGACAATGGCTGCGCTACTGCATGTCGTATACATCTGATATCTCTCTCGACAAGCCTGATAAG
CATTCAAAGTATCAGGGGCTCATGAAATACGAATCCTATTACAAAAAGCTTGATTTGTACTATCAGTTTTCAGTCCGCAT
GGGCAAAATTGTGGATGAGGACTGGCTTGAAAACGAGCGCGACAAAACACAGGCAAAGATTATGCAGCTTCTATCAAAGA
GCAAGGATGAGTATATTATCAGATGCCGGTATTGCGGCAGAATACTTCCGATTGGAAATTCACGCAATATATGCAGAGAC
TGCTACAGCATGATACGCAGGTAG

Upstream 100 bases:

>100_bases
CCCGGATGATTATAAGGCAAATACAGAACTAGCCGGAAAGGATGTTACGTTTGAGGTGACTCTTAACGGTGTATACAAAT
AAAGAGGATAACACACATAT

Downstream 100 bases:

>100_bases
CAGCCGGTTTATATTTTACGGTCAAGTCGTTGAATTTAGCTGTCCAATGTGGCATAATAGAAATAAGACCAAAATATGAA
TGGAGGAAGTTTTTATGGCA

Product: putative ATP dependent RNA helicase

Products: NA

Alternate protein names: Helicase Domain Protein; Helicase; Helicase-Like; Helicase Conserved C-Terminal Domain Protein; ATP-Dependent Helicase; ATP-Dependent RNA Helicase; ATP-Dependent DNA Helicase; MgpS ATP-Dependent Helicase; ATP-Dependent DNA Helicase Protein; RNA Helicase; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; RNA Helicase RhrA; ATP-Dependent RNA Helicase Superfamily II; Helicase C-Terminal Domain Protein; Superfamily II DNA And RNA Helicase; ATP-Dependent RNA And DNA Helicase; DNA Helicase; ATP Dependent RNA Helicase; ATP-Dependent DNA And RNA Helicase Protein; Adenosinetriphosphatase

Number of amino acids: Translated: 647; Mature: 647

Protein sequence:

>647_residues
MEKSFEEILVQFYVDQYRENAKRSTGKPVKLAHYIHRLNSKAKSIKYARFSKNETVALDKLHQEIKRLALITYYSNNKNA
RQILNREILPQLVRVDMEQFDEKEAEYLTEDFLKLLRKEYIGAICTRSMKALYNEYRSKELRREIVTLVPARPELEFPKA
QSMKRHFILHIGPTNSGKTYQALERLKLAQNGVYLGPLRLLALEVYEKMNDAGIPCTMLTGQECLEVSDSRITASTVEML
DCDKEYDIAVIDEAQMVADDDRGHSWTRAILGTLAGEIHICMSPVAKDVVIHLINLCHDEYEIREYERKTALKLEDKPFS
FPQDVREGDAFIVFSKKSVLNIAGRLEENGIKPSVIYGSLPPEIRRRQMTLFNEKKTQVVVSTDAIGMGLNLPVRRIVFL
EVEKFDGVSRRPLVISEIKQIAGRAGRFGLYDTGYVTALGQKNLSYLKNTLNIPEQDIDIVSLGFPQVLLTMDAPLDAII
KLWHEAEPSAPFRKINVDEILFLYGYAYKERYFIADFDNKYLLYKMITCPIDIKDRELVRQWLRYCMSYTSDISLDKPDK
HSKYQGLMKYESYYKKLDLYYQFSVRMGKIVDEDWLENERDKTQAKIMQLLSKSKDEYIIRCRYCGRILPIGNSRNICRD
CYSMIRR

Sequences:

>Translated_647_residues
MEKSFEEILVQFYVDQYRENAKRSTGKPVKLAHYIHRLNSKAKSIKYARFSKNETVALDKLHQEIKRLALITYYSNNKNA
RQILNREILPQLVRVDMEQFDEKEAEYLTEDFLKLLRKEYIGAICTRSMKALYNEYRSKELRREIVTLVPARPELEFPKA
QSMKRHFILHIGPTNSGKTYQALERLKLAQNGVYLGPLRLLALEVYEKMNDAGIPCTMLTGQECLEVSDSRITASTVEML
DCDKEYDIAVIDEAQMVADDDRGHSWTRAILGTLAGEIHICMSPVAKDVVIHLINLCHDEYEIREYERKTALKLEDKPFS
FPQDVREGDAFIVFSKKSVLNIAGRLEENGIKPSVIYGSLPPEIRRRQMTLFNEKKTQVVVSTDAIGMGLNLPVRRIVFL
EVEKFDGVSRRPLVISEIKQIAGRAGRFGLYDTGYVTALGQKNLSYLKNTLNIPEQDIDIVSLGFPQVLLTMDAPLDAII
KLWHEAEPSAPFRKINVDEILFLYGYAYKERYFIADFDNKYLLYKMITCPIDIKDRELVRQWLRYCMSYTSDISLDKPDK
HSKYQGLMKYESYYKKLDLYYQFSVRMGKIVDEDWLENERDKTQAKIMQLLSKSKDEYIIRCRYCGRILPIGNSRNICRD
CYSMIRR
>Mature_647_residues
MEKSFEEILVQFYVDQYRENAKRSTGKPVKLAHYIHRLNSKAKSIKYARFSKNETVALDKLHQEIKRLALITYYSNNKNA
RQILNREILPQLVRVDMEQFDEKEAEYLTEDFLKLLRKEYIGAICTRSMKALYNEYRSKELRREIVTLVPARPELEFPKA
QSMKRHFILHIGPTNSGKTYQALERLKLAQNGVYLGPLRLLALEVYEKMNDAGIPCTMLTGQECLEVSDSRITASTVEML
DCDKEYDIAVIDEAQMVADDDRGHSWTRAILGTLAGEIHICMSPVAKDVVIHLINLCHDEYEIREYERKTALKLEDKPFS
FPQDVREGDAFIVFSKKSVLNIAGRLEENGIKPSVIYGSLPPEIRRRQMTLFNEKKTQVVVSTDAIGMGLNLPVRRIVFL
EVEKFDGVSRRPLVISEIKQIAGRAGRFGLYDTGYVTALGQKNLSYLKNTLNIPEQDIDIVSLGFPQVLLTMDAPLDAII
KLWHEAEPSAPFRKINVDEILFLYGYAYKERYFIADFDNKYLLYKMITCPIDIKDRELVRQWLRYCMSYTSDISLDKPDK
HSKYQGLMKYESYYKKLDLYYQFSVRMGKIVDEDWLENERDKTQAKIMQLLSKSKDEYIIRCRYCGRILPIGNSRNICRD
CYSMIRR

Specific function: Involved In The Recf Recombination Pathway; Its Gene Expression Is Under The Regulation Of The Sos System. It Is A DNA Helicase. [C]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI31543667, Length=474, Percent_Identity=34.8101265822785, Blast_Score=255, Evalue=9e-68,
Organism=Caenorhabditis elegans, GI115532782, Length=477, Percent_Identity=35.0104821802935, Blast_Score=262, Evalue=4e-70,
Organism=Caenorhabditis elegans, GI115532784, Length=477, Percent_Identity=35.0104821802935, Blast_Score=262, Evalue=4e-70,
Organism=Saccharomyces cerevisiae, GI6325228, Length=317, Percent_Identity=41.6403785488959, Blast_Score=250, Evalue=5e-67,
Organism=Saccharomyces cerevisiae, GI6323430, Length=149, Percent_Identity=31.5436241610738, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221329989, Length=494, Percent_Identity=32.3886639676113, Blast_Score=233, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 75305; Mature: 75305

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSFEEILVQFYVDQYRENAKRSTGKPVKLAHYIHRLNSKAKSIKYARFSKNETVALDK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCEECCCCCCHHHHH
LHQEIKRLALITYYSNNKNARQILNREILPQLVRVDMEQFDEKEAEYLTEDFLKLLRKEY
HHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
IGAICTRSMKALYNEYRSKELRREIVTLVPARPELEFPKAQSMKRHFILHIGPTNSGKTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHH
QALERLKLAQNGVYLGPLRLLALEVYEKMNDAGIPCTMLTGQECLEVSDSRITASTVEML
HHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCCEEHHHHHHH
DCDKEYDIAVIDEAQMVADDDRGHSWTRAILGTLAGEIHICMSPVAKDVVIHLINLCHDE
CCCCCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCH
YEIREYERKTALKLEDKPFSFPQDVREGDAFIVFSKKSVLNIAGRLEENGIKPSVIYGSL
HHHHHHHHHHCEEECCCCCCCCHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEECCC
PPEIRRRQMTLFNEKKTQVVVSTDAIGMGLNLPVRRIVFLEVEKFDGVSRRPLVISEIKQ
CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEEHHCCCCCCCCHHHHHHHH
IAGRAGRFGLYDTGYVTALGQKNLSYLKNTLNIPEQDIDIVSLGFPQVLLTMDAPLDAII
HHCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCHHHHH
KLWHEAEPSAPFRKINVDEILFLYGYAYKERYFIADFDNKYLLYKMITCPIDIKDRELVR
HHHHCCCCCCCCEECCHHHHHHHHHHHHHCEEEEEECCCCEEEEEEEECCCCCCCHHHHH
QWLRYCMSYTSDISLDKPDKHSKYQGLMKYESYYKKLDLYYQFSVRMGKIVDEDWLENER
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCHHHHCCCC
DKTQAKIMQLLSKSKDEYIIRCRYCGRILPIGNSRNICRDCYSMIRR
HHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MEKSFEEILVQFYVDQYRENAKRSTGKPVKLAHYIHRLNSKAKSIKYARFSKNETVALDK
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCCEECCCCCCHHHHH
LHQEIKRLALITYYSNNKNARQILNREILPQLVRVDMEQFDEKEAEYLTEDFLKLLRKEY
HHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
IGAICTRSMKALYNEYRSKELRREIVTLVPARPELEFPKAQSMKRHFILHIGPTNSGKTY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHH
QALERLKLAQNGVYLGPLRLLALEVYEKMNDAGIPCTMLTGQECLEVSDSRITASTVEML
HHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCCEEHHHHHHH
DCDKEYDIAVIDEAQMVADDDRGHSWTRAILGTLAGEIHICMSPVAKDVVIHLINLCHDE
CCCCCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCH
YEIREYERKTALKLEDKPFSFPQDVREGDAFIVFSKKSVLNIAGRLEENGIKPSVIYGSL
HHHHHHHHHHCEEECCCCCCCCHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEECCC
PPEIRRRQMTLFNEKKTQVVVSTDAIGMGLNLPVRRIVFLEVEKFDGVSRRPLVISEIKQ
CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEEHHCCCCCCCCHHHHHHHH
IAGRAGRFGLYDTGYVTALGQKNLSYLKNTLNIPEQDIDIVSLGFPQVLLTMDAPLDAII
HHCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCHHHHH
KLWHEAEPSAPFRKINVDEILFLYGYAYKERYFIADFDNKYLLYKMITCPIDIKDRELVR
HHHHCCCCCCCCEECCHHHHHHHHHHHHHCEEEEEECCCCEEEEEEEECCCCCCCHHHHH
QWLRYCMSYTSDISLDKPDKHSKYQGLMKYESYYKKLDLYYQFSVRMGKIVDEDWLENER
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCHHHHCCCC
DKTQAKIMQLLSKSKDEYIIRCRYCGRILPIGNSRNICRDCYSMIRR
HHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA