| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is 238923680
Identifier: 238923680
GI number: 238923680
Start: 1181245
End: 1182843
Strand: Direct
Name: 238923680
Synonym: EUBREC_1302
Alternate gene names: NA
Gene position: 1181245-1182843 (Clockwise)
Preceding gene: 238923679
Following gene: 238923681
Centisome position: 34.24
GC content: 31.96
Gene sequence:
>1599_bases ATGTCAGATATTATGAATGAATTAAACACTATCAGAGAGGCACGATATGGAAAAGATGTGCGGGAATCCATAGCAGCTGG AATTGAAACTTGCTATAAAGAGGGAAGGGCGGGCACTACGGATTTGCAGGCAAGGCAGGATCTCTTAACAAAAGCATCTA AAACAGAGCTGGATGTTGAGCGTAAGAGAATTGACAATCTTGCAAAGCTTCCATCTGGTTCAACCACAGGTGATGCCGAA CTAACAGATATAAGAGCGGGAGCTGACGGCACTATATACAATTCAGCAGGGGCAGCAGTCCGGGGACAGGTTAGTTCACT AAAGGAAGATTTAGAACTGTTAGTTAAAATTAAAAATTTCAATGTTAAAACAGCACAACAAAATACTGATTACAATTATT CTTTGTTTAGTGGTGATATGATTGAAATTACAAACAAAACAAATGGTGGTATTGCTATTAAATTATTATATAAAAATAAT GTAATTGACACAGTAACAGATTATCTATCAAAAGATAAAAGCATTACTTATACAGCAAAATCAACATCAGACAAAATAAG ATTATGGAGTCAAGGTACTGGTTATGTAAAAGTAGAAAATCTAGATACATTCTACAGAAAAACAATTAATTCGTTAAATG ATTTTGAAACGCTTGGGGTTCAATCAAGTAATATTAATATAATGGATAGTTCATTCGATGTTAATAATTGTATTCCTAAT CGTATTTACATAATTTCTACACAGTGCATAAATGCACCAGGGATAGGGACAATAATTTCATTCGCAAAAAATAAAAATGC CGATAACACAATAGTTCAATTATTTTTTGATATAGATAATGATATTTATATGAGATATAATGTATATGGTGCCGGTTGGA AAAATTGGGAAAAACTTACAAAGTATAATTATAAAGAATCATGTAACTTATCATTATTTACAGATGTCGGTGTAATTGGT GATAGTTACGCATCGGGAGAAATTTATGCCACAGACGGCTCTCTAATTGGCGATAAATATAAAATATCTTGGATTCAGCA ATTAGCAAGAAAAAATGGATTTACAGGATATAATTTTTCTGAAGGAGGTTTATCAACAAGGACATGGCTGACATCAGAGT ATGGCTTAAAAAAACTTAATAATTCCGAAGCATGCAACTTATATATTTTAGCTCTTGGGATAAATGACTATTATGGTCTA GGTGAATCTTATTTAGGTACACAAGAAGATATTGACAGTGGTAATGATACTTTTTATGGCAACTATGCAAAAATCATTAA CGCTGTAAAAGAAAAAGCACAAAATGCAAAAATAATGATTTCGACAATAGCAATCAGAAATATTGAATCTAGTGCTACTA AAACACAAATTAAAAAATTTAATGATGCTATTATAAATATTGCAAATCATTATTCTATTCCGATAATAAGACAAGACAAA TATTCATATTTCAACAGTGCTTCATATTCTGATAACATGATACACGGACATCCAACAGCTGTAGGTTATGCTATGCTTGC GACAGAACTAGAAAAATGTATTGGAATTGCAATGGTAGAAAATGATACATATTTCGAAAGCGGGAACTATTACGATTAA
Upstream 100 bases:
>100_bases ATATTGCAGCAGACCAAAAGAAAGTGAGTTAGAGTCAACATCGGTTGTTGACACACAAGACAGCATCACAGGGCAGAAAG AAAGCAAGGAGGATTAGAGT
Downstream 100 bases:
>100_bases CTAAAGAGGGCTATCAACGATTTAATAATAAATGGCAAAAATTTAATTTTAGGAAGAACAGTCAATGGTTATAATATTGA TATAAGTTACAATAAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MSDIMNELNTIREARYGKDVRESIAAGIETCYKEGRAGTTDLQARQDLLTKASKTELDVERKRIDNLAKLPSGSTTGDAE LTDIRAGADGTIYNSAGAAVRGQVSSLKEDLELLVKIKNFNVKTAQQNTDYNYSLFSGDMIEITNKTNGGIAIKLLYKNN VIDTVTDYLSKDKSITYTAKSTSDKIRLWSQGTGYVKVENLDTFYRKTINSLNDFETLGVQSSNINIMDSSFDVNNCIPN RIYIISTQCINAPGIGTIISFAKNKNADNTIVQLFFDIDNDIYMRYNVYGAGWKNWEKLTKYNYKESCNLSLFTDVGVIG DSYASGEIYATDGSLIGDKYKISWIQQLARKNGFTGYNFSEGGLSTRTWLTSEYGLKKLNNSEACNLYILALGINDYYGL GESYLGTQEDIDSGNDTFYGNYAKIINAVKEKAQNAKIMISTIAIRNIESSATKTQIKKFNDAIINIANHYSIPIIRQDK YSYFNSASYSDNMIHGHPTAVGYAMLATELEKCIGIAMVENDTYFESGNYYD
Sequences:
>Translated_532_residues MSDIMNELNTIREARYGKDVRESIAAGIETCYKEGRAGTTDLQARQDLLTKASKTELDVERKRIDNLAKLPSGSTTGDAE LTDIRAGADGTIYNSAGAAVRGQVSSLKEDLELLVKIKNFNVKTAQQNTDYNYSLFSGDMIEITNKTNGGIAIKLLYKNN VIDTVTDYLSKDKSITYTAKSTSDKIRLWSQGTGYVKVENLDTFYRKTINSLNDFETLGVQSSNINIMDSSFDVNNCIPN RIYIISTQCINAPGIGTIISFAKNKNADNTIVQLFFDIDNDIYMRYNVYGAGWKNWEKLTKYNYKESCNLSLFTDVGVIG DSYASGEIYATDGSLIGDKYKISWIQQLARKNGFTGYNFSEGGLSTRTWLTSEYGLKKLNNSEACNLYILALGINDYYGL GESYLGTQEDIDSGNDTFYGNYAKIINAVKEKAQNAKIMISTIAIRNIESSATKTQIKKFNDAIINIANHYSIPIIRQDK YSYFNSASYSDNMIHGHPTAVGYAMLATELEKCIGIAMVENDTYFESGNYYD >Mature_531_residues SDIMNELNTIREARYGKDVRESIAAGIETCYKEGRAGTTDLQARQDLLTKASKTELDVERKRIDNLAKLPSGSTTGDAEL TDIRAGADGTIYNSAGAAVRGQVSSLKEDLELLVKIKNFNVKTAQQNTDYNYSLFSGDMIEITNKTNGGIAIKLLYKNNV IDTVTDYLSKDKSITYTAKSTSDKIRLWSQGTGYVKVENLDTFYRKTINSLNDFETLGVQSSNINIMDSSFDVNNCIPNR IYIISTQCINAPGIGTIISFAKNKNADNTIVQLFFDIDNDIYMRYNVYGAGWKNWEKLTKYNYKESCNLSLFTDVGVIGD SYASGEIYATDGSLIGDKYKISWIQQLARKNGFTGYNFSEGGLSTRTWLTSEYGLKKLNNSEACNLYILALGINDYYGLG ESYLGTQEDIDSGNDTFYGNYAKIINAVKEKAQNAKIMISTIAIRNIESSATKTQIKKFNDAIINIANHYSIPIIRQDKY SYFNSASYSDNMIHGHPTAVGYAMLATELEKCIGIAMVENDTYFESGNYYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59302; Mature: 59171
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDIMNELNTIREARYGKDVRESIAAGIETCYKEGRAGTTDLQARQDLLTKASKTELDVE CHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH RKRIDNLAKLPSGSTTGDAELTDIRAGADGTIYNSAGAAVRGQVSSLKEDLELLVKIKNF HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHEEEEECC NVKTAQQNTDYNYSLFSGDMIEITNKTNGGIAIKLLYKNNVIDTVTDYLSKDKSITYTAK CEEECCCCCCCCEEEECCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEEC STSDKIRLWSQGTGYVKVENLDTFYRKTINSLNDFETLGVQSSNINIMDSSFDVNNCIPN CCCCEEEEEECCCCEEEECCCHHHHHHHHHHCCCHHHHCCCCCCCEEEECCCCCCCCCCC RIYIISTQCINAPGIGTIISFAKNKNADNTIVQLFFDIDNDIYMRYNVYGAGWKNWEKLT EEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCHHHHH KYNYKESCNLSLFTDVGVIGDSYASGEIYATDGSLIGDKYKISWIQQLARKNGFTGYNFS HCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCC EGGLSTRTWLTSEYGLKKLNNSEACNLYILALGINDYYGLGESYLGTQEDIDSGNDTFYG CCCCCEEEEEEHHHHHHHCCCCCCCEEEEEEEECCCHHCCCCHHCCCHHHCCCCCCEEEC NYAKIINAVKEKAQNAKIMISTIAIRNIESSATKTQIKKFNDAIINIANHYSIPIIRQDK CHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHEEEECCCCCEEEECCC YSYFNSASYSDNMIHGHPTAVGYAMLATELEKCIGIAMVENDTYFESGNYYD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCC >Mature Secondary Structure SDIMNELNTIREARYGKDVRESIAAGIETCYKEGRAGTTDLQARQDLLTKASKTELDVE HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHH RKRIDNLAKLPSGSTTGDAELTDIRAGADGTIYNSAGAAVRGQVSSLKEDLELLVKIKNF HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHEEEEECC NVKTAQQNTDYNYSLFSGDMIEITNKTNGGIAIKLLYKNNVIDTVTDYLSKDKSITYTAK CEEECCCCCCCCEEEECCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEEC STSDKIRLWSQGTGYVKVENLDTFYRKTINSLNDFETLGVQSSNINIMDSSFDVNNCIPN CCCCEEEEEECCCCEEEECCCHHHHHHHHHHCCCHHHHCCCCCCCEEEECCCCCCCCCCC RIYIISTQCINAPGIGTIISFAKNKNADNTIVQLFFDIDNDIYMRYNVYGAGWKNWEKLT EEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCHHHHH KYNYKESCNLSLFTDVGVIGDSYASGEIYATDGSLIGDKYKISWIQQLARKNGFTGYNFS HCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCC EGGLSTRTWLTSEYGLKKLNNSEACNLYILALGINDYYGLGESYLGTQEDIDSGNDTFYG CCCCCEEEEEEHHHHHHHCCCCCCCEEEEEEEECCCHHCCCCHHCCCHHHCCCCCCEEEC NYAKIINAVKEKAQNAKIMISTIAIRNIESSATKTQIKKFNDAIINIANHYSIPIIRQDK CHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHEEEECCCCCEEEECCC YSYFNSASYSDNMIHGHPTAVGYAMLATELEKCIGIAMVENDTYFESGNYYD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA