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The map label for this gene is ganQ [H]

Identifier: 238923565

GI number: 238923565

Start: 1097094

End: 1097939

Strand: Direct

Name: ganQ [H]

Synonym: EUBREC_1185

Alternate gene names: 238923565

Gene position: 1097094-1097939 (Clockwise)

Preceding gene: 238923564

Following gene: 238923566

Centisome position: 31.8

GC content: 39.24

Gene sequence:

>846_bases
ATGACTAAGAAAAAGAGAAAACAGATTTTACAGCTTAGCGGATTACATATTTTTTATATTATACTGTGTCTGCTGGCACT
GGTACCGATTTTATATGCGTTGAATCTTTCCTTTGAAAGGGGAGGTGGAGCATTGTCCTCCGGATTATCTTTGTTTCCAA
AGGAATTTACACTGGATAATTATAAAAATATACTGACGCAGAAGCCGTTTTTGCGGTGGTTTTATAACTCTGCCGTATTA
AGCTTCTTTACAATGGTCATTGCTATCGGATTTGCCATGGTGTCATCTTATGCATTTTCAAGATACCGTTTTAAGGGAAG
AAATGGCATTTTAAAATTACTGCTTCTCTTAAATGCATTCCCGCAGATTCTGTCCATGTTTGCATTATTCCGTCTTTTAA
AACAGATGAATATGCTGGATACGAAACTGGGACTGGTGATTATTTATGCGGGAAGCATGTGCATTTTCTCTATCTGGAAT
ATGAAGGGGTATTTTGATACCATTCCGATAGAAATCGAAGAAGCATCGAAAATTGACGGTGCATCGGATTTCCAGCTGCT
GTGGAAGGTAGTAATGCCGCTGGCTCGTCCGGCAATCATTGTAACTTCTGTGATGGTACTTATTTTTGTATGGAATGAAT
ATCTGTTTTCCACAACATTTCTACTGAATGAAAACAGTTATACACTGGCAGGTGGATTATATCAGTTACAGTCCAACGAT
TACACCAGAAGCTGGGGAATGTTCTCCGCAGCCGCTATCCTGGTATCTGTTCCGGTGCTGATTATTTTCTTCTGTATACA
AAAGTATATGGTATCCGGTCTTACTGCAGGTGGTGTGAAAGGATAG

Upstream 100 bases:

>100_bases
TCAAATAACTATGGGCTGTCCTCTGCGGTATCCATTATTATCTTTTTCCTCATCATGGTATTTTCGCTGTTTACCAATCG
AGGGGTAAAGGAGGAAAATT

Downstream 100 bases:

>100_bases
AAATAAAATGGAAAAAGAAGCAATTTTGCATATTCCACTGTCACAATTTGCTTTTGCAGAAAAAGAAGACCGGCTGGTAA
TAAGAATCCGTTGTAAAAAG

Product: putative sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTKKKRKQILQLSGLHIFYIILCLLALVPILYALNLSFERGGGALSSGLSLFPKEFTLDNYKNILTQKPFLRWFYNSAVL
SFFTMVIAIGFAMVSSYAFSRYRFKGRNGILKLLLLLNAFPQILSMFALFRLLKQMNMLDTKLGLVIIYAGSMCIFSIWN
MKGYFDTIPIEIEEASKIDGASDFQLLWKVVMPLARPAIIVTSVMVLIFVWNEYLFSTTFLLNENSYTLAGGLYQLQSND
YTRSWGMFSAAAILVSVPVLIIFFCIQKYMVSGLTAGGVKG

Sequences:

>Translated_281_residues
MTKKKRKQILQLSGLHIFYIILCLLALVPILYALNLSFERGGGALSSGLSLFPKEFTLDNYKNILTQKPFLRWFYNSAVL
SFFTMVIAIGFAMVSSYAFSRYRFKGRNGILKLLLLLNAFPQILSMFALFRLLKQMNMLDTKLGLVIIYAGSMCIFSIWN
MKGYFDTIPIEIEEASKIDGASDFQLLWKVVMPLARPAIIVTSVMVLIFVWNEYLFSTTFLLNENSYTLAGGLYQLQSND
YTRSWGMFSAAAILVSVPVLIIFFCIQKYMVSGLTAGGVKG
>Mature_280_residues
TKKKRKQILQLSGLHIFYIILCLLALVPILYALNLSFERGGGALSSGLSLFPKEFTLDNYKNILTQKPFLRWFYNSAVLS
FFTMVIAIGFAMVSSYAFSRYRFKGRNGILKLLLLLNAFPQILSMFALFRLLKQMNMLDTKLGLVIIYAGSMCIFSIWNM
KGYFDTIPIEIEEASKIDGASDFQLLWKVVMPLARPAIIVTSVMVLIFVWNEYLFSTTFLLNENSYTLAGGLYQLQSNDY
TRSWGMFSAAAILVSVPVLIIFFCIQKYMVSGLTAGGVKG

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=35.4609929078014, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1790464, Length=273, Percent_Identity=33.6996336996337, Blast_Score=151, Evalue=4e-38,
Organism=Escherichia coli, GI1789860, Length=271, Percent_Identity=25.830258302583, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31758; Mature: 31627

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKKRKQILQLSGLHIFYIILCLLALVPILYALNLSFERGGGALSSGLSLFPKEFTLDN
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCHHHHHHH
YKNILTQKPFLRWFYNSAVLSFFTMVIAIGFAMVSSYAFSRYRFKGRNGILKLLLLLNAF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PQILSMFALFRLLKQMNMLDTKLGLVIIYAGSMCIFSIWNMKGYFDTIPIEIEEASKIDG
HHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHCCCCCCCCCCEEECCCCCCCC
ASDFQLLWKVVMPLARPAIIVTSVMVLIFVWNEYLFSTTFLLNENSYTLAGGLYQLQSND
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCEEEECCCC
YTRSWGMFSAAAILVSVPVLIIFFCIQKYMVSGLTAGGVKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TKKKRKQILQLSGLHIFYIILCLLALVPILYALNLSFERGGGALSSGLSLFPKEFTLDN
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCHHHHHHH
YKNILTQKPFLRWFYNSAVLSFFTMVIAIGFAMVSSYAFSRYRFKGRNGILKLLLLLNAF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
PQILSMFALFRLLKQMNMLDTKLGLVIIYAGSMCIFSIWNMKGYFDTIPIEIEEASKIDG
HHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHCCCCCCCCCCEEECCCCCCCC
ASDFQLLWKVVMPLARPAIIVTSVMVLIFVWNEYLFSTTFLLNENSYTLAGGLYQLQSND
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCEEEECCCC
YTRSWGMFSAAAILVSVPVLIIFFCIQKYMVSGLTAGGVKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]