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The map label for this gene is 238923525

Identifier: 238923525

GI number: 238923525

Start: 1060275

End: 1060769

Strand: Direct

Name: 238923525

Synonym: EUBREC_1145

Alternate gene names: NA

Gene position: 1060275-1060769 (Clockwise)

Preceding gene: 238923524

Following gene: 238923528

Centisome position: 30.74

GC content: 33.13

Gene sequence:

>495_bases
ATGGCGAAGCAGTATACAGATAAAGGTGTTAAATTCCTTCGTTCACTCAATATAAAGCCATTTCACATTGTTGAAGATGA
TATGAAGTACATCTCAAAAGAATTCTGTGCATCATTAAGAAAATCAATTCTTCATGAGAATGATTTGATTATAGTAAGAA
CTGGATTACCAGGGACATGTTGTGTGGTGCCAAAAGAATACGATGGTTGTAACTGTGCTGATGTGGTACTGGTAAAACCT
AATGTTGATATAGTGAATCCGCATTATTTAGCAGCATATATAAATATGTGGGGAAAAAAACAGGTTGAAAATAACAAAGT
AGGAGCTATTCAGAAACATTTCAATGTTAAATCAGCAGAAGAAATGCTAATAGACCTGCCTGACATAGAATATCAGAATA
AGATTGCGAAAGTATTGCGTGATATAAATGATAAAATTTTGAACAACGAAAAGATAAATGATTATTTAGCGTATCAATCC
TCGATGGTTGCTTGA

Upstream 100 bases:

>100_bases
TTTATTCGTACTAAGCATTGGCTAAAATACTACTAGAGTGCTTTTTTCGTGCCGTAAAAGGAGGTGGTTGAAGCACAAGG
CATCGGGATAAGCCCGATAT

Downstream 100 bases:

>100_bases
CCATTCATGAGCATTGGAAGAAGCCAATCTCGTAGATCATAAAGTTGTCGATTTTCATGCAGGATATCATTCATGTGCAC
TTGCAATTTGTGAATTATAT

Product: type I restriction-modification system specificity subunit

Products: NA

Alternate protein names: Restriction System DNA Specificity Subunit; Type I Restriction- System Specificity Subunit; Specificity Determinant HsdS; Type I Restriction- System Subunit S; Type I Restriction DNA Specificity Domain Protein; Type I Restriction; Hsds Of Type I Restriction- System; Type I Restriction- System S Subunit

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MAKQYTDKGVKFLRSLNIKPFHIVEDDMKYISKEFCASLRKSILHENDLIIVRTGLPGTCCVVPKEYDGCNCADVVLVKP
NVDIVNPHYLAAYINMWGKKQVENNKVGAIQKHFNVKSAEEMLIDLPDIEYQNKIAKVLRDINDKILNNEKINDYLAYQS
SMVA

Sequences:

>Translated_164_residues
MAKQYTDKGVKFLRSLNIKPFHIVEDDMKYISKEFCASLRKSILHENDLIIVRTGLPGTCCVVPKEYDGCNCADVVLVKP
NVDIVNPHYLAAYINMWGKKQVENNKVGAIQKHFNVKSAEEMLIDLPDIEYQNKIAKVLRDINDKILNNEKINDYLAYQS
SMVA
>Mature_163_residues
AKQYTDKGVKFLRSLNIKPFHIVEDDMKYISKEFCASLRKSILHENDLIIVRTGLPGTCCVVPKEYDGCNCADVVLVKPN
VDIVNPHYLAAYINMWGKKQVENNKVGAIQKHFNVKSAEEMLIDLPDIEYQNKIAKVLRDINDKILNNEKINDYLAYQSS
MVA

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18736; Mature: 18605

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQYTDKGVKFLRSLNIKPFHIVEDDMKYISKEFCASLRKSILHENDLIIVRTGLPGTC
CCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE
CVVPKEYDGCNCADVVLVKPNVDIVNPHYLAAYINMWGKKQVENNKVGAIQKHFNVKSAE
EEECCCCCCCCCEEEEEECCCCCEECCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHH
EMLIDLPDIEYQNKIAKVLRDINDKILNNEKINDYLAYQSSMVA
HHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AKQYTDKGVKFLRSLNIKPFHIVEDDMKYISKEFCASLRKSILHENDLIIVRTGLPGTC
CCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEE
CVVPKEYDGCNCADVVLVKPNVDIVNPHYLAAYINMWGKKQVENNKVGAIQKHFNVKSAE
EEECCCCCCCCCEEEEEECCCCCEECCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHH
EMLIDLPDIEYQNKIAKVLRDINDKILNNEKINDYLAYQSSMVA
HHEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA