Click here to switch to the map view.

The map label for this gene is 238923484

Identifier: 238923484

GI number: 238923484

Start: 1010217

End: 1011086

Strand: Direct

Name: 238923484

Synonym: EUBREC_1104

Alternate gene names: NA

Gene position: 1010217-1011086 (Clockwise)

Preceding gene: 238923483

Following gene: 238923485

Centisome position: 29.28

GC content: 37.82

Gene sequence:

>870_bases
ATGTTTGGAATATTAGATTATATATGCTGGATATTAGGCTTGATATTTACAATTTTTTGGATATTCCTGTTTTTTAAAGG
AAAGAAAAATGCCACACTTTTTCAAGGGTTGGATGAGAAAGAATATCCTTTAAAGGATATTTATTTTGTGGGATATGAAC
TGCTTGAACTCATTAAGTACAATTATCGAACCAAATACGACAGAAGGCTAAGGAAAGAGATATCGGTGCTCAAGGATGAC
AAGTATGCTGATTACTATATCAGAGTCACCAGAGCACAGCAGGTTACTTTAGGGTATACATTATTTACCATGTCATTTGC
CATGTATGGGCTGGCAGGAAGTATGGCAGCTGTTGCGATATTTATAATGTTCGCCTTTGTGGCATTTTACTATTATGGAA
CATCAGCCAGTGACAAGATTAAGAAACGTTCAGAGGAACTGCTGTCCGACTTCTCAAATGTTGTGTCAAAGCTTGCCCTT
CTGACTAATGCAGGTCTTATCATGAGGGATGCATGGGCAGATGTAGCTTATAATGGCAATACTACATTATATAAAGAAAT
GCAGATATCAGTTGACGAGATGAAAAATGGAGTCTCTGAGACTGAAGCTATATATCATTTTGGAAACAGATGTATCATAC
CTGAGATAAAAAAATTCGCATCTACTATCATACAGGGCATCGAAAAGGGAAACAGTGAGCTGACGGCCCTTTTACAGGAG
CAGAGTGCAGAGACCTGGAACCTAAAAAGACAGTTGGTAAAAAGAGAGGGAGAGAAAGCATCAAGCAAGCTTCTCATCCC
AATGTTTCTTATGTTTATGGGAATCCTGATTATGGTTATTGTCCCGATATTTACAAACATTGGAGCTTAG

Upstream 100 bases:

>100_bases
TTGTGTCTCCATCAGGTATCATGGCGACAACAGTAGCGGTAATCATATTTGTGGCAGCATATTTTATAGGAAGAAAAGTA
TTGGAGATAAAGATTTAGTT

Downstream 100 bases:

>100_bases
GTAGAGAATCAGAGTAATCTGATTGTTTATAGATTTCACGAAAGGAGGAAACGTTTATGTGGTTATTAATGAATGATTTA
GGACTTAAGGCAAGGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Secretion System Protein; TadC Subunit

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MFGILDYICWILGLIFTIFWIFLFFKGKKNATLFQGLDEKEYPLKDIYFVGYELLELIKYNYRTKYDRRLRKEISVLKDD
KYADYYIRVTRAQQVTLGYTLFTMSFAMYGLAGSMAAVAIFIMFAFVAFYYYGTSASDKIKKRSEELLSDFSNVVSKLAL
LTNAGLIMRDAWADVAYNGNTTLYKEMQISVDEMKNGVSETEAIYHFGNRCIIPEIKKFASTIIQGIEKGNSELTALLQE
QSAETWNLKRQLVKREGEKASSKLLIPMFLMFMGILIMVIVPIFTNIGA

Sequences:

>Translated_289_residues
MFGILDYICWILGLIFTIFWIFLFFKGKKNATLFQGLDEKEYPLKDIYFVGYELLELIKYNYRTKYDRRLRKEISVLKDD
KYADYYIRVTRAQQVTLGYTLFTMSFAMYGLAGSMAAVAIFIMFAFVAFYYYGTSASDKIKKRSEELLSDFSNVVSKLAL
LTNAGLIMRDAWADVAYNGNTTLYKEMQISVDEMKNGVSETEAIYHFGNRCIIPEIKKFASTIIQGIEKGNSELTALLQE
QSAETWNLKRQLVKREGEKASSKLLIPMFLMFMGILIMVIVPIFTNIGA
>Mature_289_residues
MFGILDYICWILGLIFTIFWIFLFFKGKKNATLFQGLDEKEYPLKDIYFVGYELLELIKYNYRTKYDRRLRKEISVLKDD
KYADYYIRVTRAQQVTLGYTLFTMSFAMYGLAGSMAAVAIFIMFAFVAFYYYGTSASDKIKKRSEELLSDFSNVVSKLAL
LTNAGLIMRDAWADVAYNGNTTLYKEMQISVDEMKNGVSETEAIYHFGNRCIIPEIKKFASTIIQGIEKGNSELTALLQE
QSAETWNLKRQLVKREGEKASSKLLIPMFLMFMGILIMVIVPIFTNIGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33267; Mature: 33267

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGILDYICWILGLIFTIFWIFLFFKGKKNATLFQGLDEKEYPLKDIYFVGYELLELIKY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
NYRTKYDRRLRKEISVLKDDKYADYYIRVTRAQQVTLGYTLFTMSFAMYGLAGSMAAVAI
HHCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIMFAFVAFYYYGTSASDKIKKRSEELLSDFSNVVSKLALLTNAGLIMRDAWADVAYNGN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCC
TTLYKEMQISVDEMKNGVSETEAIYHFGNRCIIPEIKKFASTIIQGIEKGNSELTALLQE
CEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
QSAETWNLKRQLVKREGEKASSKLLIPMFLMFMGILIMVIVPIFTNIGA
HCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGILDYICWILGLIFTIFWIFLFFKGKKNATLFQGLDEKEYPLKDIYFVGYELLELIKY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
NYRTKYDRRLRKEISVLKDDKYADYYIRVTRAQQVTLGYTLFTMSFAMYGLAGSMAAVAI
HHCCHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIMFAFVAFYYYGTSASDKIKKRSEELLSDFSNVVSKLALLTNAGLIMRDAWADVAYNGN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCC
TTLYKEMQISVDEMKNGVSETEAIYHFGNRCIIPEIKKFASTIIQGIEKGNSELTALLQE
CEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
QSAETWNLKRQLVKREGEKASSKLLIPMFLMFMGILIMVIVPIFTNIGA
HCCHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA