Click here to switch to the map view.

The map label for this gene is spoVAA [H]

Identifier: 238923448

GI number: 238923448

Start: 973268

End: 973903

Strand: Direct

Name: spoVAA [H]

Synonym: EUBREC_1068

Alternate gene names: 238923448

Gene position: 973268-973903 (Clockwise)

Preceding gene: 238923443

Following gene: 238923449

Centisome position: 28.21

GC content: 39.62

Gene sequence:

>636_bases
ATGAAGATGCCGGAGCATACTGATACCCCAAAAGAAAAAATTCTCGTGTATATACGCGCAGAAAAGCAGAAAACACTTCA
CCGCAGGCAGGTCTGCATCAATGACATAGCAAGTGTGTATTGTAAATATTCACGCTATGAGGGACAGATAAAGGGAATAA
TCGTGGATAAGATACGCGGTAAAAAGAGCGTGATATCTGTAATGAAAATAATAGAGCAAATCACGGAAATCTATGATGAT
GCACAGGTTATAAGCATTGGTGAGCCGGAGGTACTTGTAGAGTATGACGACAACAGCAAAAATAAGATTCTTGAAGCACT
AAAGGTTGCAGCGGTGTGTATACTTATATTTTTTGGTTCAGCTTTTACAATCATGGCTTTCAATAATGATATTTCGATAT
CAGGTGTGTTTGAACATTTCTACAAGCAGATAATGGGAGTGGAAAAGCCACAGGTATCGGTGCTTGAGGTGTTTTACTGC
ATTGGTCTGGCGGTCGGAATCATACTGTTTTTTAATCATATCGGAAAGCGTAAGCTATCCGACGATGTCACACCGATTCA
GGTGGAGATGGATAAGCATAATAAAGATACGTGGAACACAATAATAGACAAGGTAAAGGAAAAGCAGGATGTTTGA

Upstream 100 bases:

>100_bases
TATCGCACGAAAAATATTAATTTAATTACATGCGTGTATTTTGTGTATAAAATCAAAATAAATGGAAATTATATACATAT
GAATATTAATCGAAGGGAGC

Downstream 100 bases:

>100_bases
ATATATATTGCGTGAAATATTTTTGTCAGTGATAGCGTTTTTAGCAGGGGCAGGAGTGTCAGCCGGTGTATTTGCATTCG
TGCTCGTGATAGGAGTGGTG

Product: SpoVAA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKMPEHTDTPKEKILVYIRAEKQKTLHRRQVCINDIASVYCKYSRYEGQIKGIIVDKIRGKKSVISVMKIIEQITEIYDD
AQVISIGEPEVLVEYDDNSKNKILEALKVAAVCILIFFGSAFTIMAFNNDISISGVFEHFYKQIMGVEKPQVSVLEVFYC
IGLAVGIILFFNHIGKRKLSDDVTPIQVEMDKHNKDTWNTIIDKVKEKQDV

Sequences:

>Translated_211_residues
MKMPEHTDTPKEKILVYIRAEKQKTLHRRQVCINDIASVYCKYSRYEGQIKGIIVDKIRGKKSVISVMKIIEQITEIYDD
AQVISIGEPEVLVEYDDNSKNKILEALKVAAVCILIFFGSAFTIMAFNNDISISGVFEHFYKQIMGVEKPQVSVLEVFYC
IGLAVGIILFFNHIGKRKLSDDVTPIQVEMDKHNKDTWNTIIDKVKEKQDV
>Mature_211_residues
MKMPEHTDTPKEKILVYIRAEKQKTLHRRQVCINDIASVYCKYSRYEGQIKGIIVDKIRGKKSVISVMKIIEQITEIYDD
AQVISIGEPEVLVEYDDNSKNKILEALKVAAVCILIFFGSAFTIMAFNNDISISGVFEHFYKQIMGVEKPQVSVLEVFYC
IGLAVGIILFFNHIGKRKLSDDVTPIQVEMDKHNKDTWNTIIDKVKEKQDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021997 [H]

Pfam domain/function: PF12164 SporV_AA [H]

EC number: NA

Molecular weight: Translated: 24177; Mature: 24177

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMPEHTDTPKEKILVYIRAEKQKTLHRRQVCINDIASVYCKYSRYEGQIKGIIVDKIRG
CCCCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
KKSVISVMKIIEQITEIYDDAQVISIGEPEVLVEYDDNSKNKILEALKVAAVCILIFFGS
HHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
AFTIMAFNNDISISGVFEHFYKQIMGVEKPQVSVLEVFYCIGLAVGIILFFNHIGKRKLS
CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
DDVTPIQVEMDKHNKDTWNTIIDKVKEKQDV
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMPEHTDTPKEKILVYIRAEKQKTLHRRQVCINDIASVYCKYSRYEGQIKGIIVDKIRG
CCCCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
KKSVISVMKIIEQITEIYDDAQVISIGEPEVLVEYDDNSKNKILEALKVAAVCILIFFGS
HHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
AFTIMAFNNDISISGVFEHFYKQIMGVEKPQVSVLEVFYCIGLAVGIILFFNHIGKRKLS
CEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCC
DDVTPIQVEMDKHNKDTWNTIIDKVKEKQDV
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3926949; 8969508; 9384377 [H]