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The map label for this gene is ywaC [H]

Identifier: 238923442

GI number: 238923442

Start: 968721

End: 969395

Strand: Direct

Name: ywaC [H]

Synonym: EUBREC_1062

Alternate gene names: 238923442

Gene position: 968721-969395 (Clockwise)

Preceding gene: 238923440

Following gene: 238923443

Centisome position: 28.08

GC content: 43.56

Gene sequence:

>675_bases
ATGGAACAAGAGTTTGCGGAGGGCATTGATAGCTGGGAGACTATGATGTTTCTATACAATTCTGCACTGAAAGAGGTCAA
TACTAAGCTCGAGATACTAAATGACGAGTTTGTTCACATACATAATTATAATCCGATAGAGTACATAAAGTCGCGTATCA
AGACTCCTGAAAGCATAGTTAAGAAGCTCAAAAAGGGTGGCTACGAGAGCACCATAGAGAATATGGTCACATATGTAAAG
GACATAGCGGGCATCAGAATCGTGTGCTCGTTCACATCTGATATATACCGGCTTGCTGAGATGATTGGCAGGCAGAATGA
TTTGACCGTCATATCGGTAAAGGACTATATGAAGCATCCGAAGGCGAGCGGCTACAAGAGCTACCACATGATTGTTTCGG
TGCCTATTTTTCTTTCAAACAAGGTGGTTGACACAAAGGTTGAGATACAGATTCGTACAATAGCTATGGATTTCTGGGCA
AGCCTTGAGCACAAGATATATTACAAGTTCGAGGGCAATGCACCTGAGTATATCAGCCGCGATCTGCGTGAGTGTGCAGG
TATCGTAGGACAGCTTGATGCAAAGATGCTTTCGCTCAATGAGGCAATCCTTGAGGCCAAGGAGAAGCAGGAGCATGAGA
GGGAGGAGAAAATACGAGAAGATGAACATCATTAA

Upstream 100 bases:

>100_bases
AATAATAGGTATAATTTGCCAATTACGCGAATAAATATGCTATAATTGATTAAAAGAGTCTGATAAATATACAGGCGAAT
AGATCACAGGGAGGTTTTTA

Downstream 100 bases:

>100_bases
TGTCGAAAATATAACAAAGTCATATACTGGAAGGAAGCTTTTTTCTAAAGCTTCCTTTTATGTGCAGGAAAACGAAAAAA
TCGGTATCATCGGTATAAAT

Product: GTP pyrophosphokinase

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MEQEFAEGIDSWETMMFLYNSALKEVNTKLEILNDEFVHIHNYNPIEYIKSRIKTPESIVKKLKKGGYESTIENMVTYVK
DIAGIRIVCSFTSDIYRLAEMIGRQNDLTVISVKDYMKHPKASGYKSYHMIVSVPIFLSNKVVDTKVEIQIRTIAMDFWA
SLEHKIYYKFEGNAPEYISRDLRECAGIVGQLDAKMLSLNEAILEAKEKQEHEREEKIREDEHH

Sequences:

>Translated_224_residues
MEQEFAEGIDSWETMMFLYNSALKEVNTKLEILNDEFVHIHNYNPIEYIKSRIKTPESIVKKLKKGGYESTIENMVTYVK
DIAGIRIVCSFTSDIYRLAEMIGRQNDLTVISVKDYMKHPKASGYKSYHMIVSVPIFLSNKVVDTKVEIQIRTIAMDFWA
SLEHKIYYKFEGNAPEYISRDLRECAGIVGQLDAKMLSLNEAILEAKEKQEHEREEKIREDEHH
>Mature_224_residues
MEQEFAEGIDSWETMMFLYNSALKEVNTKLEILNDEFVHIHNYNPIEYIKSRIKTPESIVKKLKKGGYESTIENMVTYVK
DIAGIRIVCSFTSDIYRLAEMIGRQNDLTVISVKDYMKHPKASGYKSYHMIVSVPIFLSNKVVDTKVEIQIRTIAMDFWA
SLEHKIYYKFEGNAPEYISRDLRECAGIVGQLDAKMLSLNEAILEAKEKQEHEREEKIREDEHH

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 26121; Mature: 26121

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQEFAEGIDSWETMMFLYNSALKEVNTKLEILNDEFVHIHNYNPIEYIKSRIKTPESIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCHHHHHHHHCCCHHHHH
KKLKKGGYESTIENMVTYVKDIAGIRIVCSFTSDIYRLAEMIGRQNDLTVISVKDYMKHP
HHHHHCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCC
KASGYKSYHMIVSVPIFLSNKVVDTKVEIQIRTIAMDFWASLEHKIYYKFEGNAPEYISR
CCCCCCCEEEEEEEEHHHCCCEECCEEEEEEEHHHHHHHHCCCCEEEEEECCCCHHHHHH
DLRECAGIVGQLDAKMLSLNEAILEAKEKQEHEREEKIREDEHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEQEFAEGIDSWETMMFLYNSALKEVNTKLEILNDEFVHIHNYNPIEYIKSRIKTPESIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCHHHHHHHHCCCHHHHH
KKLKKGGYESTIENMVTYVKDIAGIRIVCSFTSDIYRLAEMIGRQNDLTVISVKDYMKHP
HHHHHCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCC
KASGYKSYHMIVSVPIFLSNKVVDTKVEIQIRTIAMDFWASLEHKIYYKFEGNAPEYISR
CCCCCCCEEEEEEEEHHHCCCEECCEEEEEEEHHHHHHHHCCCCEEEEEECCCCHHHHHH
DLRECAGIVGQLDAKMLSLNEAILEAKEKQEHEREEKIREDEHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]