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The map label for this gene is fimC [H]

Identifier: 238923435

GI number: 238923435

Start: 960290

End: 961072

Strand: Direct

Name: fimC [H]

Synonym: EUBREC_1055

Alternate gene names: 238923435

Gene position: 960290-961072 (Clockwise)

Preceding gene: 238923434

Following gene: 238923436

Centisome position: 27.84

GC content: 42.15

Gene sequence:

>783_bases
TTGGAAAAAGTTATCGCAAAGTCTGGTATCAGTGGAAGCACGCTTAAGCTTATAGCCATTTTTACCATGCTCATAGACCA
TATTGCGGCAACGGTTATTCTTCAGATGATAAATAACGGGATAGGTGGACAAACGCTTATTGATATCTACTGGGTCATGC
GTTCTATAGGGCGCATGGCCTTTCCTGTTTTCTGCTTCCTGCTTGTGGAGGGCTTCAAATATACACACAGCAGGGAAAAA
TATGCTGCGAGGATGTTTATATTCGCGCTTATCTCTGAGATACCGTTTGACCTTGCAATAAACAATACAGTGCTCGAATT
TAAGAGCAACAATGTGTTTTTTACACTGCTTTTAGGCCTGCTTGCCATCACAGTGCTTGATTGGCTTAAGTCGGTCGATA
AAATAGAAAAGGCATCCTCTGCAGTCAAGTGGTTTTTTGTCACACTGATCAGGTGTATAGTAATGGTATCAGTGGTGCTT
GTTATGATGATTATTGCAGAGTTTGTGCTTTGCTGTGATTATGGTGCGGCGGGTGTAGGGTGCATTGTCATGATGTACCT
GCTTTCTTCAAACCGGGATGTTGCATTTGCCGTGGCAGTCATACTGCTTGGACTTTTCTCAGGTACCATAGAGTTTTTTG
CACTGTTTATGCTTATACCGCTTCGCTATTACAATGGAAAAAGAGGCATTTCACTAAAATATGTCTTTTACGCCTTTTAC
CCGGTGCATCTTTTTGTACTGTATCTGATATGCAGGCTTGCTATGGCTGCTGTTCACACCTAA

Upstream 100 bases:

>100_bases
CATGTAGGAAAGTTCTCTTCAGACAGAACAATCCAGGAATATGTGGACGATATCTGGCATCTTGACAGAATTACCGTAAA
TATGGCAGGAGTATAGGATT

Downstream 100 bases:

>100_bases
CAGAGTGACAGACAACGATTAAAATGGGGGAATAGATGAAAAAGCTTTTAAAAATCATACCGGCACTTGTGTTTGCTGCC
TGTTGCTTTATGTTCGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MEKVIAKSGISGSTLKLIAIFTMLIDHIAATVILQMINNGIGGQTLIDIYWVMRSIGRMAFPVFCFLLVEGFKYTHSREK
YAARMFIFALISEIPFDLAINNTVLEFKSNNVFFTLLLGLLAITVLDWLKSVDKIEKASSAVKWFFVTLIRCIVMVSVVL
VMMIIAEFVLCCDYGAAGVGCIVMMYLLSSNRDVAFAVAVILLGLFSGTIEFFALFMLIPLRYYNGKRGISLKYVFYAFY
PVHLFVLYLICRLAMAAVHT

Sequences:

>Translated_260_residues
MEKVIAKSGISGSTLKLIAIFTMLIDHIAATVILQMINNGIGGQTLIDIYWVMRSIGRMAFPVFCFLLVEGFKYTHSREK
YAARMFIFALISEIPFDLAINNTVLEFKSNNVFFTLLLGLLAITVLDWLKSVDKIEKASSAVKWFFVTLIRCIVMVSVVL
VMMIIAEFVLCCDYGAAGVGCIVMMYLLSSNRDVAFAVAVILLGLFSGTIEFFALFMLIPLRYYNGKRGISLKYVFYAFY
PVHLFVLYLICRLAMAAVHT
>Mature_260_residues
MEKVIAKSGISGSTLKLIAIFTMLIDHIAATVILQMINNGIGGQTLIDIYWVMRSIGRMAFPVFCFLLVEGFKYTHSREK
YAARMFIFALISEIPFDLAINNTVLEFKSNNVFFTLLLGLLAITVLDWLKSVDKIEKASSAVKWFFVTLIRCIVMVSVVL
VMMIIAEFVLCCDYGAAGVGCIVMMYLLSSNRDVAFAVAVILLGLFSGTIEFFALFMLIPLRYYNGKRGISLKYVFYAFY
PVHLFVLYLICRLAMAAVHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008875 [H]

Pfam domain/function: PF05857 TraX [H]

EC number: NA

Molecular weight: Translated: 29212; Mature: 29212

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1675418 [H]