Click here to switch to the map view.

The map label for this gene is 238923382

Identifier: 238923382

GI number: 238923382

Start: 897903

End: 899639

Strand: Direct

Name: 238923382

Synonym: EUBREC_1002

Alternate gene names: NA

Gene position: 897903-899639 (Clockwise)

Preceding gene: 238923381

Following gene: 238923383

Centisome position: 26.03

GC content: 39.95

Gene sequence:

>1737_bases
ATGACTAAAAATATGAGCACAAGCTACACATTTGCACAAAACGAAAGCATATCGCCCCGCCAGCTATACAGGCTATACGT
CTTTAATCTGCTTGGAGTCGGCACACTGGTGCTTCCAAACAATCTGGCGAAGCTTGGAAAGTATGCTTTTATCTCAATCG
CACTCGGAGTATTCATGGCATGGCTATTTATGTGGATAGTAAGCGAGGTACGTGAACGTAGGAAAACAATATATGACAGA
AGCATTGATAAAACAAAATATGCGAAAATGTTAATTTATGATTTAATTATTGCAATATACGAGCTGTCACAGGCCGCATT
TCTTGCATGGATATTTGTAAAGCTGATACGTGACAGCCTTATACCGGATGAATCATTTACAGTTGTACTCCTTGTGATAA
TGGCGGTATGCGCTTATGCGCTAAGTGGCGGAGTGGAGTGCCGTGCCAGGGTATACGAGGTAGTATTTTTCTTTGTGCTG
ATACCGCTTGCCGCTATGCTTTTGTTTGCGCTATCGGATATGAGATTAGACTATCTGATGATTAAGGACAGAGTCGGTGT
GGACTTTGGCATAGCGGATATATTTGCGGGCGCATACTATGTGTTTGCAGCATCCATTTCCGTGTTCAATATACTGTTTG
TAAGGGAACGCACTGCCTCACAGATACGAGGGAGTGTGAGTAAAGCAATATTCACATATGCAGGCATTCTTTTTTTATTG
TATGCAGTATTGCTTGGAAACTTCGGAAAATATTCACTGTCGGAAATAGAGTTTCCGGCTGTCGTACTGATGAGTGATGT
GCAGATAAAAGGCAGCTTCTTCAAGAGGGCAGATGCACTGATGCTGTCGGTGTGGTTTTTCACGTTGTTTTCAGTACTCA
ATATGAGCCTTTATTATGCGGTTTTAAGATGTGAGAATTTTGCTGAAAATACGAGAGAAATTATATTTACATTTAATAAA
AACCGGCATTCCTGTAGCAATAAGCAATTTGGCTCTGACAGACAGAAAAGTCATGACAAGGAAAAGAGCACTATGAGAAG
CTGGTGCATCATTTTTGTCATAGCAGTCACAGTGACCTTAGCATATATTCTTGAAAGTGGAGATGAAATCGTGAAAAAAT
ATCTTGGATTTTTAATGTGCATAGCGATACCGGTCATAGTAGTGCTGACGATAGGTCTCATGCTTACCGGCTGTAGTGCA
GTGGAGCTTGAGGAGCGTTGCTTTCCGACACTTGCTGCGGTGGATGTTGTAGCTGTAGATACTGACGAAATAACCGATAA
AGAAGTAACAGGTAAAGATGTAACTGATTACAAAGAATATGTTAGCCACAGAGATGATTTGGCAAATGAAAGTAGCGGAT
ATATAGAGTTTTATTATAACATGGACAAATCCTATGAGCCCGAATATGCAGATGATATCAAAACAGCCGTGGACAGCTTC
GAGGAGCGGCTGTCACAAAAAGCCGATACCAATCATCTGAAGGTGATATTAATAGGAAAAACACTTAGAAAAGATAAAGC
AGCTTATTCAGACTTCATGGAATATTGCAAGACATCAAAAAAATTTCCGAGAAACACATATGTGTGCATAGCAGATGATA
TAAATGATATCTTTGATAACATGGGTGATTATTATGAGCAGAAAATAAATAAGGAGAATCATGAGGATGGTGAACCGATA
ATTACACTTGGCACATTGCTGGATGACTATACGAATGAAATTCATGGAGCATGGTAA

Upstream 100 bases:

>100_bases
GATGAAAAGGACAGTATCATACGATTTCCGCTTCGCAGACTATGGAGGCGGCCTGTATTTGCAAGGGAAAATGAGTGCAG
AAAGCTGAAAGGAAATAAGG

Downstream 100 bases:

>100_bases
AAATTTCAAAAAGGATGAATAATCTTTTCAAATAAGGCAATACTTGTTTACATGAGAAAGAAAATAATAATAACAACCAT
AGCAATAATATCCCTTACGG

Product: spore germination protein-like protein YndE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MTKNMSTSYTFAQNESISPRQLYRLYVFNLLGVGTLVLPNNLAKLGKYAFISIALGVFMAWLFMWIVSEVRERRKTIYDR
SIDKTKYAKMLIYDLIIAIYELSQAAFLAWIFVKLIRDSLIPDESFTVVLLVIMAVCAYALSGGVECRARVYEVVFFFVL
IPLAAMLLFALSDMRLDYLMIKDRVGVDFGIADIFAGAYYVFAASISVFNILFVRERTASQIRGSVSKAIFTYAGILFLL
YAVLLGNFGKYSLSEIEFPAVVLMSDVQIKGSFFKRADALMLSVWFFTLFSVLNMSLYYAVLRCENFAENTREIIFTFNK
NRHSCSNKQFGSDRQKSHDKEKSTMRSWCIIFVIAVTVTLAYILESGDEIVKKYLGFLMCIAIPVIVVLTIGLMLTGCSA
VELEERCFPTLAAVDVVAVDTDEITDKEVTGKDVTDYKEYVSHRDDLANESSGYIEFYYNMDKSYEPEYADDIKTAVDSF
EERLSQKADTNHLKVILIGKTLRKDKAAYSDFMEYCKTSKKFPRNTYVCIADDINDIFDNMGDYYEQKINKENHEDGEPI
ITLGTLLDDYTNEIHGAW

Sequences:

>Translated_578_residues
MTKNMSTSYTFAQNESISPRQLYRLYVFNLLGVGTLVLPNNLAKLGKYAFISIALGVFMAWLFMWIVSEVRERRKTIYDR
SIDKTKYAKMLIYDLIIAIYELSQAAFLAWIFVKLIRDSLIPDESFTVVLLVIMAVCAYALSGGVECRARVYEVVFFFVL
IPLAAMLLFALSDMRLDYLMIKDRVGVDFGIADIFAGAYYVFAASISVFNILFVRERTASQIRGSVSKAIFTYAGILFLL
YAVLLGNFGKYSLSEIEFPAVVLMSDVQIKGSFFKRADALMLSVWFFTLFSVLNMSLYYAVLRCENFAENTREIIFTFNK
NRHSCSNKQFGSDRQKSHDKEKSTMRSWCIIFVIAVTVTLAYILESGDEIVKKYLGFLMCIAIPVIVVLTIGLMLTGCSA
VELEERCFPTLAAVDVVAVDTDEITDKEVTGKDVTDYKEYVSHRDDLANESSGYIEFYYNMDKSYEPEYADDIKTAVDSF
EERLSQKADTNHLKVILIGKTLRKDKAAYSDFMEYCKTSKKFPRNTYVCIADDINDIFDNMGDYYEQKINKENHEDGEPI
ITLGTLLDDYTNEIHGAW
>Mature_577_residues
TKNMSTSYTFAQNESISPRQLYRLYVFNLLGVGTLVLPNNLAKLGKYAFISIALGVFMAWLFMWIVSEVRERRKTIYDRS
IDKTKYAKMLIYDLIIAIYELSQAAFLAWIFVKLIRDSLIPDESFTVVLLVIMAVCAYALSGGVECRARVYEVVFFFVLI
PLAAMLLFALSDMRLDYLMIKDRVGVDFGIADIFAGAYYVFAASISVFNILFVRERTASQIRGSVSKAIFTYAGILFLLY
AVLLGNFGKYSLSEIEFPAVVLMSDVQIKGSFFKRADALMLSVWFFTLFSVLNMSLYYAVLRCENFAENTREIIFTFNKN
RHSCSNKQFGSDRQKSHDKEKSTMRSWCIIFVIAVTVTLAYILESGDEIVKKYLGFLMCIAIPVIVVLTIGLMLTGCSAV
ELEERCFPTLAAVDVVAVDTDEITDKEVTGKDVTDYKEYVSHRDDLANESSGYIEFYYNMDKSYEPEYADDIKTAVDSFE
ERLSQKADTNHLKVILIGKTLRKDKAAYSDFMEYCKTSKKFPRNTYVCIADDINDIFDNMGDYYEQKINKENHEDGEPII
TLGTLLDDYTNEIHGAW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65928; Mature: 65797

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKNMSTSYTFAQNESISPRQLYRLYVFNLLGVGTLVLPNNLAKLGKYAFISIALGVFMA
CCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHH
WLFMWIVSEVRERRKTIYDRSIDKTKYAKMLIYDLIIAIYELSQAAFLAWIFVKLIRDSL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IPDESFTVVLLVIMAVCAYALSGGVECRARVYEVVFFFVLIPLAAMLLFALSDMRLDYLM
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
IKDRVGVDFGIADIFAGAYYVFAASISVFNILFVRERTASQIRGSVSKAIFTYAGILFLL
EHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAVLLGNFGKYSLSEIEFPAVVLMSDVQIKGSFFKRADALMLSVWFFTLFSVLNMSLYYA
HHHHHCCCCCCCHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRCENFAENTREIIFTFNKNRHSCSNKQFGSDRQKSHDKEKSTMRSWCIIFVIAVTVTL
HHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHH
AYILESGDEIVKKYLGFLMCIAIPVIVVLTIGLMLTGCSAVELEERCFPTLAAVDVVAVD
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEC
TDEITDKEVTGKDVTDYKEYVSHRDDLANESSGYIEFYYNMDKSYEPEYADDIKTAVDSF
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
EERLSQKADTNHLKVILIGKTLRKDKAAYSDFMEYCKTSKKFPRNTYVCIADDINDIFDN
HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHH
MGDYYEQKINKENHEDGEPIITLGTLLDDYTNEIHGAW
HHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA