| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
Click here to switch to the map view.
The map label for this gene is znuB [H]
Identifier: 238923375
GI number: 238923375
Start: 890733
End: 891545
Strand: Direct
Name: znuB [H]
Synonym: EUBREC_0995
Alternate gene names: 238923375
Gene position: 890733-891545 (Clockwise)
Preceding gene: 238923374
Following gene: 238923376
Centisome position: 25.82
GC content: 41.08
Gene sequence:
>813_bases ATGAATATAACCTCCTGGCTTCAATATGATTTTATGAGAAATGCCCTTATCGCTGTGCTCATCATCACACCGCTTTTTGG CATAATGGGAACCATGATTGTAAACAAAAAGATGGCATACTTTTCAGATGCACTCGGACATTCAGCACTTACAGGAATCG CTGTCGGAGTGGTATGCGGCATGGCAGACACCTCGCTTGCCATGGTGATATTTGCGATAGTGTTTGCACTTCTTTTAAAT AAGATAGGCAGTCTGAACACTGCATCGACAGATACCATTATATCGGTATTTTCATCGTGCTCTGTGGCGATAGGTCTTGC GATACTGTCAAAGGGCGGCAATTTCAGCAAATACTCAAGTATACTGGTGGGCGATGTGCTAAGCATCACAAAGACTGAGA TAGTTTATCTAATTGTGATTTTTGTGGTCACTATAGTGTTCTGGGTGCTTTGCTTCAATAAGCTCAACGCCATATGTATA CACAGGAGCGTGGCAAAAAGCAAGGGTATCCATGTGCGTCTTCTGGATAATCTGTTTGCGGTGCTTGTAGCACTCATAGT TATGCTATCCATCAAGTGGATAGGCATACTTATCATAAATGCTCTGCTTATATTACCGGCGGCTTCATCAAGGAATATTT CGGAAAATATGCGTGAGTATCATTTCTTTTCAGTGATATTTTCAGTATTTTCCGGTATAGTCGGCCTCGCAGTGTCATAC TACACCAATGTGGCAACAGGTCCGATGATAGTGATTATTGCATCGGTAATATATTTTTCGACATTTATATTTGGCAGAAA GCTGAAAAAATAA
Upstream 100 bases:
>100_bases TTGCAAAGCAGGGAACTGTGAAGGAAGTATTCGAGAGCAGGGAATTTGAGAGAATTTTTTACACAGGAGAGGAATCCTGG GTGAGAGAGGAGGAACACAA
Downstream 100 bases:
>100_bases CGGCTAAAGCTATAAGCAACAGACGCAAAACAGCCGATACACAATATAAGAGAAAGACTGTTTAGCTATATCAGACGCTA TACAGGTTGATAATAGTATA
Product: ABC-3 protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNITSWLQYDFMRNALIAVLIITPLFGIMGTMIVNKKMAYFSDALGHSALTGIAVGVVCGMADTSLAMVIFAIVFALLLN KIGSLNTASTDTIISVFSSCSVAIGLAILSKGGNFSKYSSILVGDVLSITKTEIVYLIVIFVVTIVFWVLCFNKLNAICI HRSVAKSKGIHVRLLDNLFAVLVALIVMLSIKWIGILIINALLILPAASSRNISENMREYHFFSVIFSVFSGIVGLAVSY YTNVATGPMIVIIASVIYFSTFIFGRKLKK
Sequences:
>Translated_270_residues MNITSWLQYDFMRNALIAVLIITPLFGIMGTMIVNKKMAYFSDALGHSALTGIAVGVVCGMADTSLAMVIFAIVFALLLN KIGSLNTASTDTIISVFSSCSVAIGLAILSKGGNFSKYSSILVGDVLSITKTEIVYLIVIFVVTIVFWVLCFNKLNAICI HRSVAKSKGIHVRLLDNLFAVLVALIVMLSIKWIGILIINALLILPAASSRNISENMREYHFFSVIFSVFSGIVGLAVSY YTNVATGPMIVIIASVIYFSTFIFGRKLKK >Mature_270_residues MNITSWLQYDFMRNALIAVLIITPLFGIMGTMIVNKKMAYFSDALGHSALTGIAVGVVCGMADTSLAMVIFAIVFALLLN KIGSLNTASTDTIISVFSSCSVAIGLAILSKGGNFSKYSSILVGDVLSITKTEIVYLIVIFVVTIVFWVLCFNKLNAICI HRSVAKSKGIHVRLLDNLFAVLVALIVMLSIKWIGILIINALLILPAASSRNISENMREYHFFSVIFSVFSGIVGLAVSY YTNVATGPMIVIIASVIYFSTFIFGRKLKK
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=235, Percent_Identity=25.531914893617, Blast_Score=89, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 29330; Mature: 29330
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITSWLQYDFMRNALIAVLIITPLFGIMGTMIVNKKMAYFSDALGHSALTGIAVGVVCG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MADTSLAMVIFAIVFALLLNKIGSLNTASTDTIISVFSSCSVAIGLAILSKGGNFSKYSS CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ILVGDVLSITKTEIVYLIVIFVVTIVFWVLCFNKLNAICIHRSVAKSKGIHVRLLDNLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH VLVALIVMLSIKWIGILIINALLILPAASSRNISENMREYHFFSVIFSVFSGIVGLAVSY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTNVATGPMIVIIASVIYFSTFIFGRKLKK HHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNITSWLQYDFMRNALIAVLIITPLFGIMGTMIVNKKMAYFSDALGHSALTGIAVGVVCG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC MADTSLAMVIFAIVFALLLNKIGSLNTASTDTIISVFSSCSVAIGLAILSKGGNFSKYSS CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ILVGDVLSITKTEIVYLIVIFVVTIVFWVLCFNKLNAICIHRSVAKSKGIHVRLLDNLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH VLVALIVMLSIKWIGILIINALLILPAASSRNISENMREYHFFSVIFSVFSGIVGLAVSY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YTNVATGPMIVIIASVIYFSTFIFGRKLKK HHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]