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The map label for this gene is oppA [H]

Identifier: 238923361

GI number: 238923361

Start: 876671

End: 878368

Strand: Direct

Name: oppA [H]

Synonym: EUBREC_0981

Alternate gene names: 238923361

Gene position: 876671-878368 (Clockwise)

Preceding gene: 238923360

Following gene: 238923362

Centisome position: 25.41

GC content: 43.7

Gene sequence:

>1698_bases
ATGAAAAAGAGATTAGTAGCACTTACTCTTGTTGCAGCTATGGCACTTGGCATGACTGCTTGTGGAAGCAAGAGCGAGGG
CAAAATATCTACTAACGACACATCTGCTAACGGCACTTCTCATACTGCTGTATCAGCAGGCGTAGACTGGACAGGCTATG
ATGAGTTAGTAGAATCTATCCGTACAGAAGCAGATCTTGCAAAGCGTGCAGAGATGATGCACCAGGCAGAGGATATGCTT
ATGGATACATGGTGTGTTATTCCACTTTACTACTACAATGACCAGTATATGCTCAAGGATTATGTCACAGACGTATACTC
AACAGTAGAGGGTATGAAATACTTCTACAATGCAAAGAACACAAAGAATGCCGGAAAGTTAAACATCTTCATGGCATCAG
AGCCTGATCATATCGATCCTGCATTAAACAGTACTGTTGACGGCGGATGTCTTGCAGTAAACAGCTTTGAGGGTCTTATG
CGTTACAACGCTGAGGGCAAGCTTGAGCCTGCATGTGCAGAGAGCTATGAGGTTTCTGAGGATGGCCTCACATACACATT
CACAATGCGTGACGGTCTTAAGTGGTCAAACGGTGATGAGCTTACTGCAAAGGATTTCGAGTGGTCTTGGAGGAGAGCTG
CAGATCCTAAGACAGCTGCAGATTACAGCTACCTTTGCGCAGTATTCGCAGGATATGATGATACAAAGGGTCTTGCTGCT
GATGATGTAGTAGCTTCTGATGATGGAAAGACTCTTACTGTCAAGCTTAAAGCAGTTACACCATACTTCCTTGACTTATG
TGCATTCCCATTCTTCTTCCCTGTAAACCAGAAGTCAGTAGAGGGAAATGATGACTGGGCAAACGATGCAAGCGACAAGT
TCGTTACAAACGGTGCATTCACACTCAAGGAGTGGAAGCATGATTCAAGCATGACATATGTTAAGAATCCTAACTATTGG
GATGCTGACAATGTAACAGTTGATGAGATGAACGTAATGCTTACATCTGATGATGTTTCAGCTTACACAGCTTACCAGAA
CGGTGACCTTGATTTCATCGATACAGTTCCTACAGCCGAGATTGAGGCAGCTAAGAAGACAAGCGAGTTCTACACAGTTG
ACAACCTTGGAACATACTACGTAGGCTTCAACATTAACTCTAAGCTCTACTCAGAACTTGGATTAGATGCTGACCAGGCT
AAGGTATTCAGAAAAGCAATCTGTCTTCTTATCGATCGTCAGTACATTATCGATACAATCGCCCAGGGCGGACAGAAGAT
TGCCACAACATTTATCCCAGAGGGCGTTACAGATGGTAACGGTGGCGAGTTCAAGAACAAAGATTACTACGGCACAGATT
ACGATAAGAACTTTGAGGAGGCTAAAGAGCTTCTTGCTTCTATCGGATTATTAGATGAGAGCACAGGTCAGGTAAACCAG
ACTGTCGAGTTCTCATACCTTGTAAACAACTCAGAGTCAAATGTAAAGATTGGTGAGGCTATTCAGGCAGATCTTTCAAA
GGTAGGTATCAACTTAAAGGTTGAGCAGCAGGAGTGGAACGTATTCCTTAACAGCCGTAAGGACGGACAGTTTGATTTCG
CCCGTGAGGGATGGCTTATGGATTACAACGATCCAATCAACATGCTTGAGATGTTCACAACAAAATCAGGTAACAACGAT
ATGCAGTTCGGTCGTTAA

Upstream 100 bases:

>100_bases
AACCGCTAATATAAGGTTTTTACCGGCATATAGCTTAAGCCACATGTGCCGGTTCTAACATAAATTTATTTTTCATATTA
ATTAATTAGGAGGAAGAAAG

Downstream 100 bases:

>100_bases
TCTGATTTTGCTATCATAACAAAGCCGCTCGTGCCATTCGCACGACGATGCGAATAACATGCAGAGTATATAGGAAGTCA
TACAGCTATTGTATGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KA [H]

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MKKRLVALTLVAAMALGMTACGSKSEGKISTNDTSANGTSHTAVSAGVDWTGYDELVESIRTEADLAKRAEMMHQAEDML
MDTWCVIPLYYYNDQYMLKDYVTDVYSTVEGMKYFYNAKNTKNAGKLNIFMASEPDHIDPALNSTVDGGCLAVNSFEGLM
RYNAEGKLEPACAESYEVSEDGLTYTFTMRDGLKWSNGDELTAKDFEWSWRRAADPKTAADYSYLCAVFAGYDDTKGLAA
DDVVASDDGKTLTVKLKAVTPYFLDLCAFPFFFPVNQKSVEGNDDWANDASDKFVTNGAFTLKEWKHDSSMTYVKNPNYW
DADNVTVDEMNVMLTSDDVSAYTAYQNGDLDFIDTVPTAEIEAAKKTSEFYTVDNLGTYYVGFNINSKLYSELGLDADQA
KVFRKAICLLIDRQYIIDTIAQGGQKIATTFIPEGVTDGNGGEFKNKDYYGTDYDKNFEEAKELLASIGLLDESTGQVNQ
TVEFSYLVNNSESNVKIGEAIQADLSKVGINLKVEQQEWNVFLNSRKDGQFDFAREGWLMDYNDPINMLEMFTTKSGNND
MQFGR

Sequences:

>Translated_565_residues
MKKRLVALTLVAAMALGMTACGSKSEGKISTNDTSANGTSHTAVSAGVDWTGYDELVESIRTEADLAKRAEMMHQAEDML
MDTWCVIPLYYYNDQYMLKDYVTDVYSTVEGMKYFYNAKNTKNAGKLNIFMASEPDHIDPALNSTVDGGCLAVNSFEGLM
RYNAEGKLEPACAESYEVSEDGLTYTFTMRDGLKWSNGDELTAKDFEWSWRRAADPKTAADYSYLCAVFAGYDDTKGLAA
DDVVASDDGKTLTVKLKAVTPYFLDLCAFPFFFPVNQKSVEGNDDWANDASDKFVTNGAFTLKEWKHDSSMTYVKNPNYW
DADNVTVDEMNVMLTSDDVSAYTAYQNGDLDFIDTVPTAEIEAAKKTSEFYTVDNLGTYYVGFNINSKLYSELGLDADQA
KVFRKAICLLIDRQYIIDTIAQGGQKIATTFIPEGVTDGNGGEFKNKDYYGTDYDKNFEEAKELLASIGLLDESTGQVNQ
TVEFSYLVNNSESNVKIGEAIQADLSKVGINLKVEQQEWNVFLNSRKDGQFDFAREGWLMDYNDPINMLEMFTTKSGNND
MQFGR
>Mature_565_residues
MKKRLVALTLVAAMALGMTACGSKSEGKISTNDTSANGTSHTAVSAGVDWTGYDELVESIRTEADLAKRAEMMHQAEDML
MDTWCVIPLYYYNDQYMLKDYVTDVYSTVEGMKYFYNAKNTKNAGKLNIFMASEPDHIDPALNSTVDGGCLAVNSFEGLM
RYNAEGKLEPACAESYEVSEDGLTYTFTMRDGLKWSNGDELTAKDFEWSWRRAADPKTAADYSYLCAVFAGYDDTKGLAA
DDVVASDDGKTLTVKLKAVTPYFLDLCAFPFFFPVNQKSVEGNDDWANDASDKFVTNGAFTLKEWKHDSSMTYVKNPNYW
DADNVTVDEMNVMLTSDDVSAYTAYQNGDLDFIDTVPTAEIEAAKKTSEFYTVDNLGTYYVGFNINSKLYSELGLDADQA
KVFRKAICLLIDRQYIIDTIAQGGQKIATTFIPEGVTDGNGGEFKNKDYYGTDYDKNFEEAKELLASIGLLDESTGQVNQ
TVEFSYLVNNSESNVKIGEAIQADLSKVGINLKVEQQEWNVFLNSRKDGQFDFAREGWLMDYNDPINMLEMFTTKSGNND
MQFGR

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, It binds peptides up to five amino acids long with high affinity. Also required for sporulation and competence [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=435, Percent_Identity=31.264367816092, Blast_Score=205, Evalue=6e-54,
Organism=Escherichia coli, GI1789397, Length=441, Percent_Identity=29.4784580498866, Blast_Score=195, Evalue=5e-51,
Organism=Escherichia coli, GI1787495, Length=441, Percent_Identity=30.3854875283447, Blast_Score=194, Evalue=1e-50,
Organism=Escherichia coli, GI1789966, Length=397, Percent_Identity=25.9445843828715, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1789887, Length=382, Percent_Identity=24.3455497382199, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787052, Length=367, Percent_Identity=22.8882833787466, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 63023; Mature: 63023

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRLVALTLVAAMALGMTACGSKSEGKISTNDTSANGTSHTAVSAGVDWTGYDELVESI
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHH
RTEADLAKRAEMMHQAEDMLMDTWCVIPLYYYNDQYMLKDYVTDVYSTVEGMKYFYNAKN
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC
TKNAGKLNIFMASEPDHIDPALNSTVDGGCLAVNSFEGLMRYNAEGKLEPACAESYEVSE
CCCCCEEEEEEECCCCCCCHHHCCCCCCCEEEEECHHHHHEECCCCCCCCHHCCCCEECC
DGLTYTFTMRDGLKWSNGDELTAKDFEWSWRRAADPKTAADYSYLCAVFAGYDDTKGLAA
CCEEEEEEECCCCCCCCCCCCEECCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
DDVVASDDGKTLTVKLKAVTPYFLDLCAFPFFFPVNQKSVEGNDDWANDASDKFVTNGAF
CCEEECCCCCEEEEEEEECCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECCEE
TLKEWKHDSSMTYVKNPNYWDADNVTVDEMNVMLTSDDVSAYTAYQNGDLDFIDTVPTAE
EEHHCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCH
IEAAKKTSEFYTVDNLGTYYVGFNINSKLYSELGLDADQAKVFRKAICLLIDRQYIIDTI
HHHHHCCCCEEEECCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
AQGGQKIATTFIPEGVTDGNGGEFKNKDYYGTDYDKNFEEAKELLASIGLLDESTGQVNQ
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
TVEFSYLVNNSESNVKIGEAIQADLSKVGINLKVEQQEWNVFLNSRKDGQFDFAREGWLM
EEEEEEEEECCCCCEEEHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCCCCEEE
DYNDPINMLEMFTTKSGNNDMQFGR
ECCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKRLVALTLVAAMALGMTACGSKSEGKISTNDTSANGTSHTAVSAGVDWTGYDELVESI
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHH
RTEADLAKRAEMMHQAEDMLMDTWCVIPLYYYNDQYMLKDYVTDVYSTVEGMKYFYNAKN
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCC
TKNAGKLNIFMASEPDHIDPALNSTVDGGCLAVNSFEGLMRYNAEGKLEPACAESYEVSE
CCCCCEEEEEEECCCCCCCHHHCCCCCCCEEEEECHHHHHEECCCCCCCCHHCCCCEECC
DGLTYTFTMRDGLKWSNGDELTAKDFEWSWRRAADPKTAADYSYLCAVFAGYDDTKGLAA
CCEEEEEEECCCCCCCCCCCCEECCCCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
DDVVASDDGKTLTVKLKAVTPYFLDLCAFPFFFPVNQKSVEGNDDWANDASDKFVTNGAF
CCEEECCCCCEEEEEEEECCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECCEE
TLKEWKHDSSMTYVKNPNYWDADNVTVDEMNVMLTSDDVSAYTAYQNGDLDFIDTVPTAE
EEHHCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCH
IEAAKKTSEFYTVDNLGTYYVGFNINSKLYSELGLDADQAKVFRKAICLLIDRQYIIDTI
HHHHHCCCCEEEECCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
AQGGQKIATTFIPEGVTDGNGGEFKNKDYYGTDYDKNFEEAKELLASIGLLDESTGQVNQ
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
TVEFSYLVNNSESNVKIGEAIQADLSKVGINLKVEQQEWNVFLNSRKDGQFDFAREGWLM
EEEEEEEEECCCCCEEEHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCCCCEEE
DYNDPINMLEMFTTKSGNNDMQFGR
ECCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]