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The map label for this gene is ykoG [H]

Identifier: 238923350

GI number: 238923350

Start: 866617

End: 867432

Strand: Direct

Name: ykoG [H]

Synonym: EUBREC_0967

Alternate gene names: 238923350

Gene position: 866617-867432 (Clockwise)

Preceding gene: 238923349

Following gene: 238923351

Centisome position: 25.12

GC content: 47.55

Gene sequence:

>816_bases
GTGGTACAACAGATAGAGAAAGGGAATATTATGACAGACAACAAATCCGGGGAGATACTCATAATAGAGGATGACAAGGA
CATTAATGATCTGCTTGCGACAGCGCTTTCAAAAGCCGGATATAGAACAAGACAGGCATGGTCAGGCACAGAGGGAGAGC
TTTTGCTTAAGCTGGACAGGGAAGCTTATGCGCTTGTGCTATTGGATCTGATGCTTCCGGGGCTTTCAGGGGAGGAGCTT
CTGGCGCGGATACGGCAGATGGATGCGTCACTTCCGGTGATAATCCTTACGGCAAAGGATGAGCTGGATGAGAAAATCAA
TCTGCTCGTGGCAGGCGCTGATGATTACATCACAAAGCCGTTTGAGATAAAGGAGGTCGTTGCCAGAGTGACTGTGCAGC
TGCGTCATGCGGTGGCAGATGTGCCTTCAAAGTCGGGCAAGGCAGGAGAAAATCAGACAAAAGCAGAAAATGATACCGGA
CAGGGAGATACTGCAAATACATACATAGCGGGACCCGTTAAAATAGAGCACAGACAGCTTGTGCTCGATCGGATTTCAAG
ACAGCTTTATGTAGCTGATAATGCTGTTGACGGCATCACAAAGCAGGAGTTTGCCATACTTGAGCTTCTCATGGCGCATC
CCAGACAGGTGTTTGCCAAGGAGGACATATTTGAATATGCCTGGGATGAGCCGTACATGGGCGAGACAAAGACTCTTGAT
GTGCACATCAGCAATATCAGAAAGAAGATAAAAAAGCTGACCGATGACGAGTACATAGAGACAGTGTGGGGCATAGGCTA
CAAAATGAAAGAGTAA

Upstream 100 bases:

>100_bases
TTTGCAAAAACAACTGAATAGCGGATTCAAATGAATAGGACGCATAGTGAGATAAATGCGTCCGGCATGATTTTGTCAGT
ATAGAGGTGTTATTATAGAA

Downstream 100 bases:

>100_bases
AGGTAAACAAGCTTTACTCTTTTTTTACTTTTTGTTAGCGATGTATTAGGATTTTACATTTATATTATGATTAAAGGGTT
GCTAAGGAAAAAAGAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MVQQIEKGNIMTDNKSGEILIIEDDKDINDLLATALSKAGYRTRQAWSGTEGELLLKLDREAYALVLLDLMLPGLSGEEL
LARIRQMDASLPVIILTAKDELDEKINLLVAGADDYITKPFEIKEVVARVTVQLRHAVADVPSKSGKAGENQTKAENDTG
QGDTANTYIAGPVKIEHRQLVLDRISRQLYVADNAVDGITKQEFAILELLMAHPRQVFAKEDIFEYAWDEPYMGETKTLD
VHISNIRKKIKKLTDDEYIETVWGIGYKMKE

Sequences:

>Translated_271_residues
MVQQIEKGNIMTDNKSGEILIIEDDKDINDLLATALSKAGYRTRQAWSGTEGELLLKLDREAYALVLLDLMLPGLSGEEL
LARIRQMDASLPVIILTAKDELDEKINLLVAGADDYITKPFEIKEVVARVTVQLRHAVADVPSKSGKAGENQTKAENDTG
QGDTANTYIAGPVKIEHRQLVLDRISRQLYVADNAVDGITKQEFAILELLMAHPRQVFAKEDIFEYAWDEPYMGETKTLD
VHISNIRKKIKKLTDDEYIETVWGIGYKMKE
>Mature_271_residues
MVQQIEKGNIMTDNKSGEILIIEDDKDINDLLATALSKAGYRTRQAWSGTEGELLLKLDREAYALVLLDLMLPGLSGEEL
LARIRQMDASLPVIILTAKDELDEKINLLVAGADDYITKPFEIKEVVARVTVQLRHAVADVPSKSGKAGENQTKAENDTG
QGDTANTYIAGPVKIEHRQLVLDRISRQLYVADNAVDGITKQEFAILELLMAHPRQVFAKEDIFEYAWDEPYMGETKTLD
VHISNIRKKIKKLTDDEYIETVWGIGYKMKE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=251, Percent_Identity=30.6772908366534, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1786599, Length=257, Percent_Identity=29.1828793774319, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1789402, Length=255, Percent_Identity=32.9411764705882, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI87082012, Length=252, Percent_Identity=31.7460317460317, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1788394, Length=260, Percent_Identity=30.7692307692308, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1786784, Length=254, Percent_Identity=27.9527559055118, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1790552, Length=255, Percent_Identity=34.5098039215686, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787375, Length=249, Percent_Identity=29.3172690763052, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1790860, Length=254, Percent_Identity=26.3779527559055, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786911, Length=253, Percent_Identity=28.4584980237154, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI2367329, Length=254, Percent_Identity=31.8897637795276, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790299, Length=122, Percent_Identity=36.0655737704918, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790863, Length=257, Percent_Identity=27.6264591439689, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=32.1100917431193, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 30417; Mature: 30417

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQQIEKGNIMTDNKSGEILIIEDDKDINDLLATALSKAGYRTRQAWSGTEGELLLKLDR
CCCCCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECC
EAYALVLLDLMLPGLSGEELLARIRQMDASLPVIILTAKDELDEKINLLVAGADDYITKP
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHCCEEEEEEECCHHHCCCC
FEIKEVVARVTVQLRHAVADVPSKSGKAGENQTKAENDTGQGDTANTYIAGPVKIEHRQL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEHHHHH
VLDRISRQLYVADNAVDGITKQEFAILELLMAHPRQVFAKEDIFEYAWDEPYMGETKTLD
HHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEE
VHISNIRKKIKKLTDDEYIETVWGIGYKMKE
EEHHHHHHHHHHCCCHHHHHHHHCCCEEECC
>Mature Secondary Structure
MVQQIEKGNIMTDNKSGEILIIEDDKDINDLLATALSKAGYRTRQAWSGTEGELLLKLDR
CCCCCCCCCEEECCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECC
EAYALVLLDLMLPGLSGEELLARIRQMDASLPVIILTAKDELDEKINLLVAGADDYITKP
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHCCEEEEEEECCHHHCCCC
FEIKEVVARVTVQLRHAVADVPSKSGKAGENQTKAENDTGQGDTANTYIAGPVKIEHRQL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEHHHHH
VLDRISRQLYVADNAVDGITKQEFAILELLMAHPRQVFAKEDIFEYAWDEPYMGETKTLD
HHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEE
VHISNIRKKIKKLTDDEYIETVWGIGYKMKE
EEHHHHHHHHHHCCCHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]