| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923313
Identifier: 238923313
GI number: 238923313
Start: 830604
End: 832043
Strand: Direct
Name: 238923313
Synonym: EUBREC_0930
Alternate gene names: NA
Gene position: 830604-832043 (Clockwise)
Preceding gene: 238923312
Following gene: 238923314
Centisome position: 24.08
GC content: 42.08
Gene sequence:
>1440_bases ATGGGAAAGAAGAAAAAAGCAATTATGACACTCATCGAGGCACTTGTCCTCATATCACTCGCAGGCTGTGCCGGCAAAAA GGTAGATTATGGCGTGGACACGGAGGTAAAATCCCAAAATGTGGTAAGCAGTGTAAAGGATATTGACACCAATACAAGTT TTAATGATGAACTTACAGTAAATATGGGTGGTACTGATGAAAAGGTGAAAATCACGGCAGATATCAGAGTGCCGGAATGT GATACCATGTCAGTCACAGAGGTAGAGCGCATACCTTGTACCAAGGAGTTCAAGGAAAAGGTGATAAAGGCATATTTTGG TGATTCACAGGTCTATTATTACGACTATGCGCACATGACAAAAAAGGAGCTTGAGGAGATTATTGAGACTCTTGACAGGG ACAACAACAGTCTGTCGGATGATGCCTCTGAGGAGATTTTGAAATGGCATGATGATATGAAAACTGAGTGCACAAAAGCA CTTGAAACGGCAGCTGATGTGTGGACAGAGGCCACAGAATATGATTCCTGTGATGATTTTGTCGGAAAAATAGGTGATAC CTGGTTTCACCTTCAGTTTTCAAGGCCAGATGATGACAACAGTGTGCTATCAGGCATCCAGAGCTATCCGCTTGACAGAT GTGTGAAAAGCGTTTCAGATGGGGATCCGGATGAGATGAGTACTAAATTTGATGATGGCTATGTGAAGCAGTACTATGGA CCAAAATCACTGAAAGAGTATGACACGGTGAGGTATTTAAACGGTGACTTTATTGATGGAGACCTGCCGGTAAGCGATGT CAATGAGGCAAATATTTCGTTTGATGAGGCAAAGAAGAAAGCAGGTGACTTCATGCAGGCAATAGGAATTGAGTCAATGA TTAAAACAGGAGAAAGCGACTGTGAATGGGAGGGATATAACAAGACTGAGGATAATGTATATAAGGAGGGGGATGTGCAT AGAGCCATATGGGGCTATGCGCTTGAATATTCGCTTGGCGCAGATGATGTAGTGTATTCAAAATCACTGAATGTATTTGA TTATTCAGCTTATAACAAATTTTGTCCTATGGACTGTCCTGGTTATGAGACAGGCAGTTTCAATGTAAATGAATATGGTG TCTATAGATTTGATATAGCAGAGCCGGTAAGCATTGTGAAAAAACAGCAGAAGGTGGAGCTCTTACCGGTGTCAAATATT TATAAGATTGCAAGAAATGAGCTTGAAAGCCACTCGGATAAATATATTGTGGAAGCGGATACACAATATCGTTATCTGAC ACTTGGCTATATCAGGGTAAAGGACAGCTCAGATTCACAGAGATTCAGCTATATCCCGGCATGGAGCCTTGAGCTGCTGC AAAGAGGAGAGGTCGAATCGTGTCCGGTATTTGTAAATGCAATAGACGGAACAGTGATTGAGCCGGAGCAGATATTCTGA
Upstream 100 bases:
>100_bases GCTGGTTGATTCACAAAAGAAAAATGTGATACTTGTAAATGCAATAGATGGCACAATAATCAATTCCGAGGATGTATTTT AAAATTTATGGAGAACTATT
Downstream 100 bases:
>100_bases ATCAGAGAGAAGTGTGCATGGAGACTAAGGGAAATTATATAATAAAAAATGCAATACATGATACAAAAAGTTTATACATG GAGTTACATTTTTAGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MGKKKKAIMTLIEALVLISLAGCAGKKVDYGVDTEVKSQNVVSSVKDIDTNTSFNDELTVNMGGTDEKVKITADIRVPEC DTMSVTEVERIPCTKEFKEKVIKAYFGDSQVYYYDYAHMTKKELEEIIETLDRDNNSLSDDASEEILKWHDDMKTECTKA LETAADVWTEATEYDSCDDFVGKIGDTWFHLQFSRPDDDNSVLSGIQSYPLDRCVKSVSDGDPDEMSTKFDDGYVKQYYG PKSLKEYDTVRYLNGDFIDGDLPVSDVNEANISFDEAKKKAGDFMQAIGIESMIKTGESDCEWEGYNKTEDNVYKEGDVH RAIWGYALEYSLGADDVVYSKSLNVFDYSAYNKFCPMDCPGYETGSFNVNEYGVYRFDIAEPVSIVKKQQKVELLPVSNI YKIARNELESHSDKYIVEADTQYRYLTLGYIRVKDSSDSQRFSYIPAWSLELLQRGEVESCPVFVNAIDGTVIEPEQIF
Sequences:
>Translated_479_residues MGKKKKAIMTLIEALVLISLAGCAGKKVDYGVDTEVKSQNVVSSVKDIDTNTSFNDELTVNMGGTDEKVKITADIRVPEC DTMSVTEVERIPCTKEFKEKVIKAYFGDSQVYYYDYAHMTKKELEEIIETLDRDNNSLSDDASEEILKWHDDMKTECTKA LETAADVWTEATEYDSCDDFVGKIGDTWFHLQFSRPDDDNSVLSGIQSYPLDRCVKSVSDGDPDEMSTKFDDGYVKQYYG PKSLKEYDTVRYLNGDFIDGDLPVSDVNEANISFDEAKKKAGDFMQAIGIESMIKTGESDCEWEGYNKTEDNVYKEGDVH RAIWGYALEYSLGADDVVYSKSLNVFDYSAYNKFCPMDCPGYETGSFNVNEYGVYRFDIAEPVSIVKKQQKVELLPVSNI YKIARNELESHSDKYIVEADTQYRYLTLGYIRVKDSSDSQRFSYIPAWSLELLQRGEVESCPVFVNAIDGTVIEPEQIF >Mature_478_residues GKKKKAIMTLIEALVLISLAGCAGKKVDYGVDTEVKSQNVVSSVKDIDTNTSFNDELTVNMGGTDEKVKITADIRVPECD TMSVTEVERIPCTKEFKEKVIKAYFGDSQVYYYDYAHMTKKELEEIIETLDRDNNSLSDDASEEILKWHDDMKTECTKAL ETAADVWTEATEYDSCDDFVGKIGDTWFHLQFSRPDDDNSVLSGIQSYPLDRCVKSVSDGDPDEMSTKFDDGYVKQYYGP KSLKEYDTVRYLNGDFIDGDLPVSDVNEANISFDEAKKKAGDFMQAIGIESMIKTGESDCEWEGYNKTEDNVYKEGDVHR AIWGYALEYSLGADDVVYSKSLNVFDYSAYNKFCPMDCPGYETGSFNVNEYGVYRFDIAEPVSIVKKQQKVELLPVSNIY KIARNELESHSDKYIVEADTQYRYLTLGYIRVKDSSDSQRFSYIPAWSLELLQRGEVESCPVFVNAIDGTVIEPEQIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54285; Mature: 54154
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKKKAIMTLIEALVLISLAGCAGKKVDYGVDTEVKSQNVVSSVKDIDTNTSFNDELTV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEE NMGGTDEKVKITADIRVPECDTMSVTEVERIPCTKEFKEKVIKAYFGDSQVYYYDYAHMT EECCCCCEEEEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEHHHHH KKELEEIIETLDRDNNSLSDDASEEILKWHDDMKTECTKALETAADVWTEATEYDSCDDF HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VGKIGDTWFHLQFSRPDDDNSVLSGIQSYPLDRCVKSVSDGDPDEMSTKFDDGYVKQYYG HHHCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHCC PKSLKEYDTVRYLNGDFIDGDLPVSDVNEANISFDEAKKKAGDFMQAIGIESMIKTGESD CCHHHHHHHEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC CEWEGYNKTEDNVYKEGDVHRAIWGYALEYSLGADDVVYSKSLNVFDYSAYNKFCPMDCP CCCCCCCCCCCCCCCCCCCHHHHHHEEEEECCCCCCEEEECCCCEEEECCCCCCCCCCCC GYETGSFNVNEYGVYRFDIAEPVSIVKKQQKVELLPVSNIYKIARNELESHSDKYIVEAD CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCCEEEEEC TQYRYLTLGYIRVKDSSDSQRFSYIPAWSLELLQRGEVESCPVFVNAIDGTVIEPEQIF CCEEEEEEEEEEEECCCCCCEEEECCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCC >Mature Secondary Structure GKKKKAIMTLIEALVLISLAGCAGKKVDYGVDTEVKSQNVVSSVKDIDTNTSFNDELTV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEE NMGGTDEKVKITADIRVPECDTMSVTEVERIPCTKEFKEKVIKAYFGDSQVYYYDYAHMT EECCCCCEEEEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEHHHHH KKELEEIIETLDRDNNSLSDDASEEILKWHDDMKTECTKALETAADVWTEATEYDSCDDF HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VGKIGDTWFHLQFSRPDDDNSVLSGIQSYPLDRCVKSVSDGDPDEMSTKFDDGYVKQYYG HHHCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHCC PKSLKEYDTVRYLNGDFIDGDLPVSDVNEANISFDEAKKKAGDFMQAIGIESMIKTGESD CCHHHHHHHEEEECCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC CEWEGYNKTEDNVYKEGDVHRAIWGYALEYSLGADDVVYSKSLNVFDYSAYNKFCPMDCP CCCCCCCCCCCCCCCCCCCHHHHHHEEEEECCCCCCEEEECCCCEEEECCCCCCCCCCCC GYETGSFNVNEYGVYRFDIAEPVSIVKKQQKVELLPVSNIYKIARNELESHSDKYIVEAD CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCCEEEEEC TQYRYLTLGYIRVKDSSDSQRFSYIPAWSLELLQRGEVESCPVFVNAIDGTVIEPEQIF CCEEEEEEEEEEEECCCCCCEEEECCHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA