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The map label for this gene is yrrC [H]

Identifier: 238923135

GI number: 238923135

Start: 669675

End: 671894

Strand: Direct

Name: yrrC [H]

Synonym: EUBREC_0728

Alternate gene names: 238923135

Gene position: 669675-671894 (Clockwise)

Preceding gene: 238923134

Following gene: 238923136

Centisome position: 19.41

GC content: 45.41

Gene sequence:

>2220_bases
TTGGAAACCGAAACAGTCACAGGATACGTTGATCATATAATATACAGAAATGCAGAAAACGGGTATACAGTACTTGTTCT
TGTAGTGAACGAGGAGGAGCTCACATGTGTGGGCACTTTTTCGGACATTGCTGAGGGGGAAAATATAGAGGCTCACGGTG
AGTATACAGAGCATGCCACATATGGCAGACAGTTTAAGGTAGTAAGCTTTGAAGAGAAGGAGCCAGAGGATGAGATGGCT
ATTGAGAGGTATCTGGGCTCAGGAGCCATACATGGTATAGGACTTGCACTCGCAGCACGTATTGTCAGGCGATTCAAGAA
GGATACCTTCCGCATCATAGAGGAAGAGCCGGAGAGGCTTGCTGAGGTAAAGGGCATCAGCCAGAGAAAGGCTATGGAGA
TTGCGGACCAGGTCAATGCAAAAAGAGACTTAAGGGAAGCCATGATTTTTTTGCAGCAGTACGGCATCAATATGAATCTG
GCTGTGAAGATATATAATAAGTATGGCGGAGAGATATACAGCGTGCTCAAGGAAAATCCGTACCGCATGGCGGATGATAT
CGACGGAGTTGGTTTTAAAACTGCAGATGAGATAGCGGCGCGGGTTGGCATCAAGACTGATTCTGATTTTAGAATAAAAA
GCGGTATACAGTATGTTTTGCAGCAGGCTGCCATGGACGGACACACATATCTGCCGATGGAGGAACTTACGAGGCGTGCT
GTATATCTGCTCGGAGTGGAAAGCTCGCAGGTTGAGGCACATTACATGAATCTGGCCATGGACAGGAAGATTGTCATGCA
GCTAAAGGATGATATAACCCAGATTTATGCTAACACCTTTTATTATATGGAGGCAAACACGGCAGCCATGCTAAAGCAGC
TTGATGTGACGTATGATGTGCCGGATATCGAGATAGAGGCTGCAATCAGAAATATAGAGAAAAAGACAGAGATGGAGCTC
GATGAGCACCAGGTAGAGGCGGTGAAGGAAGCAGTCAGAAATGGCCTTTTAGTCATTACCGGAGGACCCGGAACAGGAAA
AACCACCACCATCAATACTATTATCAAGTATTTTGAGCTGGAGGGCATGGATATTTTTCTGGCTGCACCGACAGGCCGTG
CGGCAAAACGCATGAGTGAGACAACAGGCTACGAGGCACGCACAATCCACCGTATGCTTGAGTTAAACGGCGGCATGGAC
ACAGGAAGCGCAGCTGGCTTTGAGAGAAATGAAAGGAATCCGCTCGAGACGGATGTAATCATCATAGATGAGATGTCGAT
GGTTGATATATCACTCATGTACTCATTGCTAAAGGCGGTTGTGGCAGGTACGAGACTCATACTTGTAGGAGATGTGAACC
AGCTTCCGAGCGTGGGACCGGGCAGCGTGCTAAAGGATATTATTGATTCAGGTGCATTCCACACGGTAAAGCTTACAAAG
ATTTTTCGTCAGGCGAGCACGAGCGATATTATAGTAAACGCCCACAAGATAAATAATGGAGAAGAGGTATCGTTAGATAA
TAAGAGCATGGATTTCTTTTTTCTAAAGAGATATGATGCCGACAAGATAATAAATGTTACATTACAGCTAATAAAGCAGA
AGCTTCCTAAGTTTATAAATGCTACAGAGTATGATATACAGGTGCTTACGCCTATGAGAAAGGGGCTTCTCGGAGTGGAA
CGTCTAAACGGTATATTGCAGGCGTATATGAATCCGGCAGACAAGAGCAAGCGCGAAAAAGAATACAGGGGCACGATTTT
CCGCGAGGGCGACAAGGTGATGCAGATAAAGAACAACTATCAGATAGAGTGGGAAATCAGGACAAAATTCGGACTTTGTG
TGGATAAGGGCATGGGAATCTTCAATGGAGATACAGGTATCATTGAGGAAATCAATGATTTTGCCGAGACCATGACCATA
TCCTTTGACGAGGGCAGAAAGGTGGAGTATCCGTTTAAGCTTTTGGAGGAGCTTGAACTTGCATACGCGGTCACTATACA
CAAGTCGCAGGGAAGTGAGTATCCGGCGGTCGTTATACCTCTTTTGAGCGGTCCGAGAATGCTTATGAACAGAAATTTGC
TCTATACGGCGGTTACAAGAGCAAAGAAATGTGTTACCATAGTGGGTGATGAACAGACATTTTATGAGATGATACAAAAC
AACTCACAGCAGAGACGCTATAGCGGGCTTAGAGACAGAATAGTGGAGGAGACTATCTGA

Upstream 100 bases:

>100_bases
AAACTTAGTAATTGCAGATACGCATGCTCTAGGGTATAATATTTAAAAAATAAAACTATTCAGAGTCACAATAAAAACAC
ACAGATACGGAGAAATTCAA

Downstream 100 bases:

>100_bases
TGAAAATAAGAAAACTTACAAATGAAGAGATAAAAGGGGCATGTGCCTTTGCGGTAAATATATACAATATCGCAATCAGA
GGCTGCTTTCGGACACTGGA

Product: helicase, RecD/TraA family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 739; Mature: 739

Protein sequence:

>739_residues
METETVTGYVDHIIYRNAENGYTVLVLVVNEEELTCVGTFSDIAEGENIEAHGEYTEHATYGRQFKVVSFEEKEPEDEMA
IERYLGSGAIHGIGLALAARIVRRFKKDTFRIIEEEPERLAEVKGISQRKAMEIADQVNAKRDLREAMIFLQQYGINMNL
AVKIYNKYGGEIYSVLKENPYRMADDIDGVGFKTADEIAARVGIKTDSDFRIKSGIQYVLQQAAMDGHTYLPMEELTRRA
VYLLGVESSQVEAHYMNLAMDRKIVMQLKDDITQIYANTFYYMEANTAAMLKQLDVTYDVPDIEIEAAIRNIEKKTEMEL
DEHQVEAVKEAVRNGLLVITGGPGTGKTTTINTIIKYFELEGMDIFLAAPTGRAAKRMSETTGYEARTIHRMLELNGGMD
TGSAAGFERNERNPLETDVIIIDEMSMVDISLMYSLLKAVVAGTRLILVGDVNQLPSVGPGSVLKDIIDSGAFHTVKLTK
IFRQASTSDIIVNAHKINNGEEVSLDNKSMDFFFLKRYDADKIINVTLQLIKQKLPKFINATEYDIQVLTPMRKGLLGVE
RLNGILQAYMNPADKSKREKEYRGTIFREGDKVMQIKNNYQIEWEIRTKFGLCVDKGMGIFNGDTGIIEEINDFAETMTI
SFDEGRKVEYPFKLLEELELAYAVTIHKSQGSEYPAVVIPLLSGPRMLMNRNLLYTAVTRAKKCVTIVGDEQTFYEMIQN
NSQQRRYSGLRDRIVEETI

Sequences:

>Translated_739_residues
METETVTGYVDHIIYRNAENGYTVLVLVVNEEELTCVGTFSDIAEGENIEAHGEYTEHATYGRQFKVVSFEEKEPEDEMA
IERYLGSGAIHGIGLALAARIVRRFKKDTFRIIEEEPERLAEVKGISQRKAMEIADQVNAKRDLREAMIFLQQYGINMNL
AVKIYNKYGGEIYSVLKENPYRMADDIDGVGFKTADEIAARVGIKTDSDFRIKSGIQYVLQQAAMDGHTYLPMEELTRRA
VYLLGVESSQVEAHYMNLAMDRKIVMQLKDDITQIYANTFYYMEANTAAMLKQLDVTYDVPDIEIEAAIRNIEKKTEMEL
DEHQVEAVKEAVRNGLLVITGGPGTGKTTTINTIIKYFELEGMDIFLAAPTGRAAKRMSETTGYEARTIHRMLELNGGMD
TGSAAGFERNERNPLETDVIIIDEMSMVDISLMYSLLKAVVAGTRLILVGDVNQLPSVGPGSVLKDIIDSGAFHTVKLTK
IFRQASTSDIIVNAHKINNGEEVSLDNKSMDFFFLKRYDADKIINVTLQLIKQKLPKFINATEYDIQVLTPMRKGLLGVE
RLNGILQAYMNPADKSKREKEYRGTIFREGDKVMQIKNNYQIEWEIRTKFGLCVDKGMGIFNGDTGIIEEINDFAETMTI
SFDEGRKVEYPFKLLEELELAYAVTIHKSQGSEYPAVVIPLLSGPRMLMNRNLLYTAVTRAKKCVTIVGDEQTFYEMIQN
NSQQRRYSGLRDRIVEETI
>Mature_739_residues
METETVTGYVDHIIYRNAENGYTVLVLVVNEEELTCVGTFSDIAEGENIEAHGEYTEHATYGRQFKVVSFEEKEPEDEMA
IERYLGSGAIHGIGLALAARIVRRFKKDTFRIIEEEPERLAEVKGISQRKAMEIADQVNAKRDLREAMIFLQQYGINMNL
AVKIYNKYGGEIYSVLKENPYRMADDIDGVGFKTADEIAARVGIKTDSDFRIKSGIQYVLQQAAMDGHTYLPMEELTRRA
VYLLGVESSQVEAHYMNLAMDRKIVMQLKDDITQIYANTFYYMEANTAAMLKQLDVTYDVPDIEIEAAIRNIEKKTEMEL
DEHQVEAVKEAVRNGLLVITGGPGTGKTTTINTIIKYFELEGMDIFLAAPTGRAAKRMSETTGYEARTIHRMLELNGGMD
TGSAAGFERNERNPLETDVIIIDEMSMVDISLMYSLLKAVVAGTRLILVGDVNQLPSVGPGSVLKDIIDSGAFHTVKLTK
IFRQASTSDIIVNAHKINNGEEVSLDNKSMDFFFLKRYDADKIINVTLQLIKQKLPKFINATEYDIQVLTPMRKGLLGVE
RLNGILQAYMNPADKSKREKEYRGTIFREGDKVMQIKNNYQIEWEIRTKFGLCVDKGMGIFNGDTGIIEEINDFAETMTI
SFDEGRKVEYPFKLLEELELAYAVTIHKSQGSEYPAVVIPLLSGPRMLMNRNLLYTAVTRAKKCVTIVGDEQTFYEMIQN
NSQQRRYSGLRDRIVEETI

Specific function: Exhibits Several Catalytic Activities, Including ATP-Dependent Exonuclease, ATP-Stimulated Endonuclease, ATP-Dependent Unwinding And DNA-Dependent ATPase Activities. Strand Cleavage Occurs 5' To 3' During The Unwinding Of Duplex DNA At Chi Sequences, Whi

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789182, Length=445, Percent_Identity=28.7640449438202, Blast_Score=132, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 83584; Mature: 83584

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METETVTGYVDHIIYRNAENGYTVLVLVVNEEELTCVGTFSDIAEGENIEAHGEYTEHAT
CCCCCHHHHHHHHEEECCCCCCEEEEEEECCCCEEEEECHHHHCCCCCEEECCCCHHHCC
YGRQFKVVSFEEKEPEDEMAIERYLGSGAIHGIGLALAARIVRRFKKDTFRIIEEEPERL
CCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
AEVKGISQRKAMEIADQVNAKRDLREAMIFLQQYGINMNLAVKIYNKYGGEIYSVLKENP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHCCC
YRMADDIDGVGFKTADEIAARVGIKTDSDFRIKSGIQYVLQQAAMDGHTYLPMEELTRRA
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHE
VYLLGVESSQVEAHYMNLAMDRKIVMQLKDDITQIYANTFYYMEANTAAMLKQLDVTYDV
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHCCCEECC
PDIEIEAAIRNIEKKTEMELDEHQVEAVKEAVRNGLLVITGGPGTGKTTTINTIIKYFEL
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHEE
EGMDIFLAAPTGRAAKRMSETTGYEARTIHRMLELNGGMDTGSAAGFERNERNPLETDVI
CCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
IIDEMSMVDISLMYSLLKAVVAGTRLILVGDVNQLPSVGPGSVLKDIIDSGAFHTVKLTK
EEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEHHHH
IFRQASTSDIIVNAHKINNGEEVSLDNKSMDFFFLKRYDADKIINVTLQLIKQKLPKFIN
HHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
ATEYDIQVLTPMRKGLLGVERLNGILQAYMNPADKSKREKEYRGTIFREGDKVMQIKNNY
CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCEEEEEECCE
QIEWEIRTKFGLCVDKGMGIFNGDTGIIEEINDFAETMTISFDEGRKVEYPFKLLEELEL
EEEEEEECCCCEEECCCCCEECCCCHHHHHHHHHHHHEEEEECCCCCEECHHHHHHHHHE
AYAVTIHKSQGSEYPAVVIPLLSGPRMLMNRNLLYTAVTRAKKCVTIVGDEQTFYEMIQN
EEEEEEECCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHCCEEEEEECCHHHHHHHHHC
NSQQRRYSGLRDRIVEETI
CCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METETVTGYVDHIIYRNAENGYTVLVLVVNEEELTCVGTFSDIAEGENIEAHGEYTEHAT
CCCCCHHHHHHHHEEECCCCCCEEEEEEECCCCEEEEECHHHHCCCCCEEECCCCHHHCC
YGRQFKVVSFEEKEPEDEMAIERYLGSGAIHGIGLALAARIVRRFKKDTFRIIEEEPERL
CCCEEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
AEVKGISQRKAMEIADQVNAKRDLREAMIFLQQYGINMNLAVKIYNKYGGEIYSVLKENP
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHCCC
YRMADDIDGVGFKTADEIAARVGIKTDSDFRIKSGIQYVLQQAAMDGHTYLPMEELTRRA
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHE
VYLLGVESSQVEAHYMNLAMDRKIVMQLKDDITQIYANTFYYMEANTAAMLKQLDVTYDV
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHCCCEECC
PDIEIEAAIRNIEKKTEMELDEHQVEAVKEAVRNGLLVITGGPGTGKTTTINTIIKYFEL
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHEE
EGMDIFLAAPTGRAAKRMSETTGYEARTIHRMLELNGGMDTGSAAGFERNERNPLETDVI
CCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
IIDEMSMVDISLMYSLLKAVVAGTRLILVGDVNQLPSVGPGSVLKDIIDSGAFHTVKLTK
EEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEHHHH
IFRQASTSDIIVNAHKINNGEEVSLDNKSMDFFFLKRYDADKIINVTLQLIKQKLPKFIN
HHHHCCCCCEEEEEEECCCCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHC
ATEYDIQVLTPMRKGLLGVERLNGILQAYMNPADKSKREKEYRGTIFREGDKVMQIKNNY
CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCEEEEEECCE
QIEWEIRTKFGLCVDKGMGIFNGDTGIIEEINDFAETMTISFDEGRKVEYPFKLLEELEL
EEEEEEECCCCEEECCCCCEECCCCHHHHHHHHHHHHEEEEECCCCCEECHHHHHHHHHE
AYAVTIHKSQGSEYPAVVIPLLSGPRMLMNRNLLYTAVTRAKKCVTIVGDEQTFYEMIQN
EEEEEEECCCCCCCCEEEEECCCCCHHHHCCCHHHHHHHHCCEEEEEECCHHHHHHHHHC
NSQQRRYSGLRDRIVEETI
CCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: DNA-dependent ATPase activity; Phosphoric ester hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]