Click here to switch to the map view.

The map label for this gene is 238923129

Identifier: 238923129

GI number: 238923129

Start: 664479

End: 665780

Strand: Direct

Name: 238923129

Synonym: EUBREC_0722

Alternate gene names: NA

Gene position: 664479-665780 (Clockwise)

Preceding gene: 238923128

Following gene: 238923130

Centisome position: 19.26

GC content: 44.24

Gene sequence:

>1302_bases
ATGGGAATTATTAAGGCAGTAAAACAGGCAATTGGAGGCGGCTTTGCAGATACATGGCAGGAGGTTATTGAGCCGGATAA
TATAGGCGACCAGACAGTCTATGCCAGGGGTGTGCTGGTAAACAGGGGGCAGAATAAAAAAGGCTCTGACGATATTGTTT
CAAACGGCTCTATCATTCATGTATATGACAATCAGTTTATGATACTTGTTGATGGTGGCAAGATTGTGGATTACACAGCT
GAACCGGGCTACTACAAGGTGAGCAATTCATCTATGCCGTCACTTTTCAACGGACAGTTTGGGGATTCTTTAAAGGAAAC
CTTTGACCGTGTGAGATTTGGTGGACAGACACCACAGTCACAGAAGGTTTATTATATCAACCTTCAGGAAATCAAGGGAA
TCAAGTTTGGTACGAGAAATCCTATAAACTACTATGATACATTTTATAATGCGGAGCTTTTCCTTCGTGCCCATGGTACA
TATTCCATCAAAATTGTGAATCCGCTTCAGTTTTATGCAGAGGCTATTCCAAAGAATATGGATCATGTGGAGATTACTGA
TATCAATGAGCAGTATCTGTCAGAGTTTTTAGAGGCATTACAGTCTGCCATCAACCAGATGTCAGCGGATGGTACAAGAA
TTTCATTCGTCACAAGCAAGGCATCTGAGCTTGGAAGATATATGGCCAAGTGTCTTGATGAAAGCTGGAATCAGATGCGT
GGTATGGAGGTACAAAGTGTTGGTATCGCCAGCCTTTCATATGATGAGAAGTCTCAGGAGCTCATTAACACAAGAAACGA
GGGCGCAATGCTCTCAGATCCATCTATTGCACAGGGGTATATGGTCAAAAATATGTCAGAGGGTGTCAAGAATGCAGGCA
GCAACAGTGGTGGAGCTATGCAGGGCTTCATGGGTGTCGGCATGGGAATGAGCACCATGGGTAATATGATGAATGGTTTT
ACACAGATGGCACAAAATAACAGGTCAGCCGGAATGAATGCGCCGGGAAATGGTGCAGCAGGTATGGCAGCAGGAGTGGC
TTCAGGTGCCACACAGCAGGAGGATGCGTCAGGCTGGACATGTGAGTGCGGACAGAAAAACACAGGTAAATTCTGCAGTA
ATTGCGGCAAGCCTATGCCACAGGAGATTACAGAGTGGACATGTGAGTGTGGACAGAAAAATACAGGTAAATTCTGCACA
AACTGTGGCAAGCCATTACCTGTAAACACAGAGTGGACATGTGAGTGTGGACAAAAAAATACAGGTAAATTCTGCAGTAA
TTGTGGAAAACCAAGAGCATAA

Upstream 100 bases:

>100_bases
GTGAATATTGTGGCTCATATGTTGAGCCTGTCAATATAAAAGTATGGAAGCTACAGAGCTTTCATGAAGTTGATTACAAC
CATATCTAAGGAGGAAGAAA

Downstream 100 bases:

>100_bases
GATGTTGCAAAGCTGTAATCTTTGTGTTAAAATCTTTGAGTCAAGGACAAATGTCGGTGTGTGACAAACACACACCGGCC
ATTTTGGAGGTAACTAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MGIIKAVKQAIGGGFADTWQEVIEPDNIGDQTVYARGVLVNRGQNKKGSDDIVSNGSIIHVYDNQFMILVDGGKIVDYTA
EPGYYKVSNSSMPSLFNGQFGDSLKETFDRVRFGGQTPQSQKVYYINLQEIKGIKFGTRNPINYYDTFYNAELFLRAHGT
YSIKIVNPLQFYAEAIPKNMDHVEITDINEQYLSEFLEALQSAINQMSADGTRISFVTSKASELGRYMAKCLDESWNQMR
GMEVQSVGIASLSYDEKSQELINTRNEGAMLSDPSIAQGYMVKNMSEGVKNAGSNSGGAMQGFMGVGMGMSTMGNMMNGF
TQMAQNNRSAGMNAPGNGAAGMAAGVASGATQQEDASGWTCECGQKNTGKFCSNCGKPMPQEITEWTCECGQKNTGKFCT
NCGKPLPVNTEWTCECGQKNTGKFCSNCGKPRA

Sequences:

>Translated_433_residues
MGIIKAVKQAIGGGFADTWQEVIEPDNIGDQTVYARGVLVNRGQNKKGSDDIVSNGSIIHVYDNQFMILVDGGKIVDYTA
EPGYYKVSNSSMPSLFNGQFGDSLKETFDRVRFGGQTPQSQKVYYINLQEIKGIKFGTRNPINYYDTFYNAELFLRAHGT
YSIKIVNPLQFYAEAIPKNMDHVEITDINEQYLSEFLEALQSAINQMSADGTRISFVTSKASELGRYMAKCLDESWNQMR
GMEVQSVGIASLSYDEKSQELINTRNEGAMLSDPSIAQGYMVKNMSEGVKNAGSNSGGAMQGFMGVGMGMSTMGNMMNGF
TQMAQNNRSAGMNAPGNGAAGMAAGVASGATQQEDASGWTCECGQKNTGKFCSNCGKPMPQEITEWTCECGQKNTGKFCT
NCGKPLPVNTEWTCECGQKNTGKFCSNCGKPRA
>Mature_432_residues
GIIKAVKQAIGGGFADTWQEVIEPDNIGDQTVYARGVLVNRGQNKKGSDDIVSNGSIIHVYDNQFMILVDGGKIVDYTAE
PGYYKVSNSSMPSLFNGQFGDSLKETFDRVRFGGQTPQSQKVYYINLQEIKGIKFGTRNPINYYDTFYNAELFLRAHGTY
SIKIVNPLQFYAEAIPKNMDHVEITDINEQYLSEFLEALQSAINQMSADGTRISFVTSKASELGRYMAKCLDESWNQMRG
MEVQSVGIASLSYDEKSQELINTRNEGAMLSDPSIAQGYMVKNMSEGVKNAGSNSGGAMQGFMGVGMGMSTMGNMMNGFT
QMAQNNRSAGMNAPGNGAAGMAAGVASGATQQEDASGWTCECGQKNTGKFCSNCGKPMPQEITEWTCECGQKNTGKFCTN
CGKPLPVNTEWTCECGQKNTGKFCSNCGKPRA

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47095; Mature: 46963

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00022 EGF_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIKAVKQAIGGGFADTWQEVIEPDNIGDQTVYARGVLVNRGQNKKGSDDIVSNGSIIH
CCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCEEE
VYDNQFMILVDGGKIVDYTAEPGYYKVSNSSMPSLFNGQFGDSLKETFDRVRFGGQTPQS
EECCEEEEEEECCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
QKVYYINLQEIKGIKFGTRNPINYYDTFYNAELFLRAHGTYSIKIVNPLQFYAEAIPKNM
CEEEEEEHHHHCCCCCCCCCCCCHHHHHCCCEEEEEECCEEEEEEECHHHHHHHHCCCCC
DHVEITDINEQYLSEFLEALQSAINQMSADGTRISFVTSKASELGRYMAKCLDESWNQMR
CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
GMEVQSVGIASLSYDEKSQELINTRNEGAMLSDPSIAQGYMVKNMSEGVKNAGSNSGGAM
CCEECCCCEEECCCCHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCHH
QGFMGVGMGMSTMGNMMNGFTQMAQNNRSAGMNAPGNGAAGMAAGVASGATQQEDASGWT
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCE
CECGQKNTGKFCSNCGKPMPQEITEWTCECGQKNTGKFCTNCGKPLPVNTEWTCECGQKN
EECCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEECCCCC
TGKFCSNCGKPRA
CCHHHHCCCCCCC
>Mature Secondary Structure 
GIIKAVKQAIGGGFADTWQEVIEPDNIGDQTVYARGVLVNRGQNKKGSDDIVSNGSIIH
CHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCCEEE
VYDNQFMILVDGGKIVDYTAEPGYYKVSNSSMPSLFNGQFGDSLKETFDRVRFGGQTPQS
EECCEEEEEEECCEEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
QKVYYINLQEIKGIKFGTRNPINYYDTFYNAELFLRAHGTYSIKIVNPLQFYAEAIPKNM
CEEEEEEHHHHCCCCCCCCCCCCHHHHHCCCEEEEEECCEEEEEEECHHHHHHHHCCCCC
DHVEITDINEQYLSEFLEALQSAINQMSADGTRISFVTSKASELGRYMAKCLDESWNQMR
CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
GMEVQSVGIASLSYDEKSQELINTRNEGAMLSDPSIAQGYMVKNMSEGVKNAGSNSGGAM
CCEECCCCEEECCCCHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCHH
QGFMGVGMGMSTMGNMMNGFTQMAQNNRSAGMNAPGNGAAGMAAGVASGATQQEDASGWT
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCE
CECGQKNTGKFCSNCGKPMPQEITEWTCECGQKNTGKFCTNCGKPLPVNTEWTCECGQKN
EECCCCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEECCCCC
TGKFCSNCGKPRA
CCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA