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The map label for this gene is 238923060

Identifier: 238923060

GI number: 238923060

Start: 588746

End: 591472

Strand: Direct

Name: 238923060

Synonym: EUBREC_0650

Alternate gene names: NA

Gene position: 588746-591472 (Clockwise)

Preceding gene: 238923059

Following gene: 238923061

Centisome position: 17.07

GC content: 34.87

Gene sequence:

>2727_bases
ATGAATACACAATATTATATGGTCATTATCAAGGGTGAAATAAAGACATCCGAAATAATGTCATGTGGTTACAATAGAAA
TACCCAAAAATGGGATGTAAAATTCAATAATGGAAAAACATACTCGTATGCATATTTGAATGTGGAAAAGTTGACTGATC
CGGAGGTTTTGAATCCTAACATGTATCGGATTAGCAGAGAAGGACGAGAGTTCTTTGATGTTAATGCAATATATGTATTT
AGAAGCGGAAGGGAGTCTTATTGGCACATTTGTTTTGGCGATGGTAGTGAAAGAGATTATCGTCGGAGCGACTTGCATAT
TATAGAGTCATGTCTTGCCCAGAGTCAGTCATCAAATGTATTTGAATATATAAAGCAAATTGCAGGTTTGAGTAATCTTA
AGAATGAAGAGACTGGTGAAAAATTATTGTCTAAGAAGTTTGACAAGATTTCTTTTGTGGGTAGTGATGTGGCCTTAGCA
AAGTATTTGAATCCATCGTCATTGCAAGGGAAAAGAACAGAACGCGAATACATTCCGATTTTCCCATTTGGATGCAATAA
CAGTCAGTATAAGGCTGTAAAAAATGCCATGGAGAATCAGATCAGTGTTATACAGGGACCTCCAGGAACGGGAAAGACAC
AGACGATATTGAATATTATTGCCAATATATTAATGCAAGGGAAAACGGTACAGATAGTATCCAATAATAATTCGGCAACG
GAAAACGTATATGAAAAATTATCTTCTCCAAAATACAATTTAGGTTTTATTGCTGCGACATTAGGAAGTTCTAAAAATAA
GAAATTATTTGTTGAGCATCAGGACGCTGCTTATCCCGACTTTTCGTCGTGGAAAACGGGAGAAGATCCAAGTGTTTTGC
AGAAGAAAATAGCAGAGCAATCCAGTCAGTTAAAAAGTGTTTTTGCTAAGCAGGAAAAATTAGCGTGTTTAAGGCAGGAA
CTTTCACAGTTGGTTACTGAACAGGAATATTTCAATCAATATGTTAAAGAATCAGATGTTCATACAGATAGTATTAAGTT
CAAGAAAAAACTATCTTCAAAGCAATGGATGGTATTGTGGCAGGAGTGCCAGTTGATTTCAGAAGAGAAAACGGCAATAG
GATTTTGGTTTAAGATAAAAGCTTTATTTAAATATGGAGTAACCGATTGGAGTATTTATAAGCAGGATATTTCAAAGATA
ATTACAACCTTTCAGGCAATGTATTATCGTGCAAAGCAGGCGGAGTTGTCTGCGGAAATTGCAGATATTGAAAAGTATTC
AAATAGTGTTAATAAGAATTTGCTTGAGGATTTATGCAAACAGTCAATGGTTGTCCTAAAAGACAAACTGGCAAGGAAAT
ATGAAGGTAACAGTAGTAGAAAAACTTTTAGTGAAGATAATTTGTGGAAGGAACCATACAATGTACTGGCTGAGTATCCG
GTTATATTAAGTACAACATTTTCATCAAGAAACAGCCTGAATTCAGATGTGGTGTATGATTATCTTATCATGGATGAGGC
ATCACAGGTAGATATTGCAACCGGTGCGTTGGCATTGTCCTGTGCAAGGAATGTTGTTATTGTGGGTGATACCAAGCAAC
TTCCTAATGTTGTTACAGATGATATAAAGGCCAAAGCAAAAGCTATATTTGACAGATTTAATGTGAGTGAAGGATATCAG
TATACAAACAGTTTTCTGCAATCCATTTTGGATGTTATGCCTAATGTAACACAAACATTGTTACGGGAACATTATAGGTG
TCACCCAAAAATAATAAATTTCTGTAACCAGAAATTCTATCGTGGTGAATTGATTATTATGACAACGGATAAGGGTGAAG
AGGATGTTTTATCGGTAGTAAAAACGGTAGCGGGAAATCATGAACGTAACCATTATAGTCAGCGCCAGATAGATGTTATT
AAAAATGAGATTATACCAAAATATGTTTCAAATCCGGAAGAAACCGGAATTATTGCACCGTACAAAAATCAGGTAGAAGC
ATTAAGCAAGGAGATAACAGATATTGATGCTGCTACAGTGCATAAGTTCCAGGGCAAGGAGAAAGAGAATATTATCATAT
CTACTGTGGATGATGAAATATCTGATTTTGCAGATGATCCATATTTAATCAATGTTGCTGTATCAAGAGCCAAAAAGAAA
TTGATGTTGGTTGTAACTGGAAATGTGCAATCAAAAGAGCACAATATAACAGATTTGATTGATTACATTCAGTATAATAA
TTTTGAGGTTACTGAAAGCAAGATTTATTCGATTTTTGATTACCTTTACAAGCAGTATACTGAGGAAAGAAGAGTATACT
TGCAGAAGCACAAAAAAGTATCAGAATATGATTCGGAAAATCTGATGTATTCATTGATAGAGGACATTATCTCAGCTAAC
AAGTATTCAAGCTTGGAAGTTGTTTGTCATTTTCCGTTGAATATGTTGATTAAGAATCCAGAATTATTAAATGAGCAGGA
ATGTCAGTATGCAATGAATCCAGCAACACATTTAGATTTTCTGATTTATAACAGAATTGGTAAAAAGCCTGTGTTGGCGA
TTGAGGTTGACGGATATGAATACCATAAAGAGGATACCATTCAGGCTTCAAGAGATTTATTGAAAAATCATATAATGGAG
CTGTACGAAATTCCATTACTGAGATTTAAAACAAATGGTAGCGGTGAAAGAGAAAAGATTGTAGAGATGCTGGATAAGTT
GGTTTGA

Upstream 100 bases:

>100_bases
CCGAGTTACAGTTTTAAGCTGATTGGCAAACAGGAACATTGTTATATAGAGAAGGAATTTAAAGGTAAGTAGCGTGCGGA
TAAAAAGTAGTGAGGAATAG

Downstream 100 bases:

>100_bases
TAGCGTGAAAAGAAAAAGGAGAAATTACCATGGCTGTATCTTATAAACGATTATGGAAATTATTAGTGGATAAAGAAATG
AGCAAATCGGATTTGCGTAA

Product: DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 908; Mature: 908

Protein sequence:

>908_residues
MNTQYYMVIIKGEIKTSEIMSCGYNRNTQKWDVKFNNGKTYSYAYLNVEKLTDPEVLNPNMYRISREGREFFDVNAIYVF
RSGRESYWHICFGDGSERDYRRSDLHIIESCLAQSQSSNVFEYIKQIAGLSNLKNEETGEKLLSKKFDKISFVGSDVALA
KYLNPSSLQGKRTEREYIPIFPFGCNNSQYKAVKNAMENQISVIQGPPGTGKTQTILNIIANILMQGKTVQIVSNNNSAT
ENVYEKLSSPKYNLGFIAATLGSSKNKKLFVEHQDAAYPDFSSWKTGEDPSVLQKKIAEQSSQLKSVFAKQEKLACLRQE
LSQLVTEQEYFNQYVKESDVHTDSIKFKKKLSSKQWMVLWQECQLISEEKTAIGFWFKIKALFKYGVTDWSIYKQDISKI
ITTFQAMYYRAKQAELSAEIADIEKYSNSVNKNLLEDLCKQSMVVLKDKLARKYEGNSSRKTFSEDNLWKEPYNVLAEYP
VILSTTFSSRNSLNSDVVYDYLIMDEASQVDIATGALALSCARNVVIVGDTKQLPNVVTDDIKAKAKAIFDRFNVSEGYQ
YTNSFLQSILDVMPNVTQTLLREHYRCHPKIINFCNQKFYRGELIIMTTDKGEEDVLSVVKTVAGNHERNHYSQRQIDVI
KNEIIPKYVSNPEETGIIAPYKNQVEALSKEITDIDAATVHKFQGKEKENIIISTVDDEISDFADDPYLINVAVSRAKKK
LMLVVTGNVQSKEHNITDLIDYIQYNNFEVTESKIYSIFDYLYKQYTEERRVYLQKHKKVSEYDSENLMYSLIEDIISAN
KYSSLEVVCHFPLNMLIKNPELLNEQECQYAMNPATHLDFLIYNRIGKKPVLAIEVDGYEYHKEDTIQASRDLLKNHIME
LYEIPLLRFKTNGSGEREKIVEMLDKLV

Sequences:

>Translated_908_residues
MNTQYYMVIIKGEIKTSEIMSCGYNRNTQKWDVKFNNGKTYSYAYLNVEKLTDPEVLNPNMYRISREGREFFDVNAIYVF
RSGRESYWHICFGDGSERDYRRSDLHIIESCLAQSQSSNVFEYIKQIAGLSNLKNEETGEKLLSKKFDKISFVGSDVALA
KYLNPSSLQGKRTEREYIPIFPFGCNNSQYKAVKNAMENQISVIQGPPGTGKTQTILNIIANILMQGKTVQIVSNNNSAT
ENVYEKLSSPKYNLGFIAATLGSSKNKKLFVEHQDAAYPDFSSWKTGEDPSVLQKKIAEQSSQLKSVFAKQEKLACLRQE
LSQLVTEQEYFNQYVKESDVHTDSIKFKKKLSSKQWMVLWQECQLISEEKTAIGFWFKIKALFKYGVTDWSIYKQDISKI
ITTFQAMYYRAKQAELSAEIADIEKYSNSVNKNLLEDLCKQSMVVLKDKLARKYEGNSSRKTFSEDNLWKEPYNVLAEYP
VILSTTFSSRNSLNSDVVYDYLIMDEASQVDIATGALALSCARNVVIVGDTKQLPNVVTDDIKAKAKAIFDRFNVSEGYQ
YTNSFLQSILDVMPNVTQTLLREHYRCHPKIINFCNQKFYRGELIIMTTDKGEEDVLSVVKTVAGNHERNHYSQRQIDVI
KNEIIPKYVSNPEETGIIAPYKNQVEALSKEITDIDAATVHKFQGKEKENIIISTVDDEISDFADDPYLINVAVSRAKKK
LMLVVTGNVQSKEHNITDLIDYIQYNNFEVTESKIYSIFDYLYKQYTEERRVYLQKHKKVSEYDSENLMYSLIEDIISAN
KYSSLEVVCHFPLNMLIKNPELLNEQECQYAMNPATHLDFLIYNRIGKKPVLAIEVDGYEYHKEDTIQASRDLLKNHIME
LYEIPLLRFKTNGSGEREKIVEMLDKLV
>Mature_908_residues
MNTQYYMVIIKGEIKTSEIMSCGYNRNTQKWDVKFNNGKTYSYAYLNVEKLTDPEVLNPNMYRISREGREFFDVNAIYVF
RSGRESYWHICFGDGSERDYRRSDLHIIESCLAQSQSSNVFEYIKQIAGLSNLKNEETGEKLLSKKFDKISFVGSDVALA
KYLNPSSLQGKRTEREYIPIFPFGCNNSQYKAVKNAMENQISVIQGPPGTGKTQTILNIIANILMQGKTVQIVSNNNSAT
ENVYEKLSSPKYNLGFIAATLGSSKNKKLFVEHQDAAYPDFSSWKTGEDPSVLQKKIAEQSSQLKSVFAKQEKLACLRQE
LSQLVTEQEYFNQYVKESDVHTDSIKFKKKLSSKQWMVLWQECQLISEEKTAIGFWFKIKALFKYGVTDWSIYKQDISKI
ITTFQAMYYRAKQAELSAEIADIEKYSNSVNKNLLEDLCKQSMVVLKDKLARKYEGNSSRKTFSEDNLWKEPYNVLAEYP
VILSTTFSSRNSLNSDVVYDYLIMDEASQVDIATGALALSCARNVVIVGDTKQLPNVVTDDIKAKAKAIFDRFNVSEGYQ
YTNSFLQSILDVMPNVTQTLLREHYRCHPKIINFCNQKFYRGELIIMTTDKGEEDVLSVVKTVAGNHERNHYSQRQIDVI
KNEIIPKYVSNPEETGIIAPYKNQVEALSKEITDIDAATVHKFQGKEKENIIISTVDDEISDFADDPYLINVAVSRAKKK
LMLVVTGNVQSKEHNITDLIDYIQYNNFEVTESKIYSIFDYLYKQYTEERRVYLQKHKKVSEYDSENLMYSLIEDIISAN
KYSSLEVVCHFPLNMLIKNPELLNEQECQYAMNPATHLDFLIYNRIGKKPVLAIEVDGYEYHKEDTIQASRDLLKNHIME
LYEIPLLRFKTNGSGEREKIVEMLDKLV

Specific function: Unknown

COG id: COG1112

COG function: function code L; Superfamily I DNA and RNA helicases and helicase subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA2/NAM7 helicase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17531513, Length=407, Percent_Identity=24.5700245700246, Blast_Score=87, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17531515, Length=407, Percent_Identity=24.5700245700246, Blast_Score=87, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71986364, Length=291, Percent_Identity=27.4914089347079, Blast_Score=82, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR004483 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104527; Mature: 104527

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQYYMVIIKGEIKTSEIMSCGYNRNTQKWDVKFNNGKTYSYAYLNVEKLTDPEVLNPN
CCCEEEEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCC
MYRISREGREFFDVNAIYVFRSGRESYWHICFGDGSERDYRRSDLHIIESCLAQSQSSNV
CEEEECCCCCEEECEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCH
FEYIKQIAGLSNLKNEETGEKLLSKKFDKISFVGSDVALAKYLNPSSLQGKRTEREYIPI
HHHHHHHHCHHCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHCCCCCCCCCCCCCCCCEE
FPFGCNNSQYKAVKNAMENQISVIQGPPGTGKTQTILNIIANILMQGKTVQIVSNNNSAT
EEECCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHH
ENVYEKLSSPKYNLGFIAATLGSSKNKKLFVEHQDAAYPDFSSWKTGEDPSVLQKKIAEQ
HHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
SSQLKSVFAKQEKLACLRQELSQLVTEQEYFNQYVKESDVHTDSIKFKKKLSSKQWMVLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH
QECQLISEEKTAIGFWFKIKALFKYGVTDWSIYKQDISKIITTFQAMYYRAKQAELSAEI
HHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADIEKYSNSVNKNLLEDLCKQSMVVLKDKLARKYEGNSSRKTFSEDNLWKEPYNVLAEYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
VILSTTFSSRNSLNSDVVYDYLIMDEASQVDIATGALALSCARNVVIVGDTKQLPNVVTD
EEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCHHCCHHHHH
DIKAKAKAIFDRFNVSEGYQYTNSFLQSILDVMPNVTQTLLREHYRCHPKIINFCNQKFY
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCEE
RGELIIMTTDKGEEDVLSVVKTVAGNHERNHYSQRQIDVIKNEIIPKYVSNPEETGIIAP
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCEECC
YKNQVEALSKEITDIDAATVHKFQGKEKENIIISTVDDEISDFADDPYLINVAVSRAKKK
CHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCEEEEHHHHHCCCE
LMLVVTGNVQSKEHNITDLIDYIQYNNFEVTESKIYSIFDYLYKQYTEERRVYLQKHKKV
EEEEEECCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEYDSENLMYSLIEDIISANKYSSLEVVCHFPLNMLIKNPELLNEQECQYAMNPATHLDF
HHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCHHCCCHHHHHHCCCHHHHHH
LIYNRIGKKPVLAIEVDGYEYHKEDTIQASRDLLKNHIMELYEIPLLRFKTNGSGEREKI
HHHHHCCCCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHH
VEMLDKLV
HHHHHHCC
>Mature Secondary Structure
MNTQYYMVIIKGEIKTSEIMSCGYNRNTQKWDVKFNNGKTYSYAYLNVEKLTDPEVLNPN
CCCEEEEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCC
MYRISREGREFFDVNAIYVFRSGRESYWHICFGDGSERDYRRSDLHIIESCLAQSQSSNV
CEEEECCCCCEEECEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCH
FEYIKQIAGLSNLKNEETGEKLLSKKFDKISFVGSDVALAKYLNPSSLQGKRTEREYIPI
HHHHHHHHCHHCCCCCHHHHHHHHHHHHHHEECCCCHHHHHHCCCCCCCCCCCCCCCCEE
FPFGCNNSQYKAVKNAMENQISVIQGPPGTGKTQTILNIIANILMQGKTVQIVSNNNSAT
EEECCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHH
ENVYEKLSSPKYNLGFIAATLGSSKNKKLFVEHQDAAYPDFSSWKTGEDPSVLQKKIAEQ
HHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH
SSQLKSVFAKQEKLACLRQELSQLVTEQEYFNQYVKESDVHTDSIKFKKKLSSKQWMVLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHH
QECQLISEEKTAIGFWFKIKALFKYGVTDWSIYKQDISKIITTFQAMYYRAKQAELSAEI
HHHHHHCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADIEKYSNSVNKNLLEDLCKQSMVVLKDKLARKYEGNSSRKTFSEDNLWKEPYNVLAEYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCC
VILSTTFSSRNSLNSDVVYDYLIMDEASQVDIATGALALSCARNVVIVGDTKQLPNVVTD
EEEEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCEEEEECCHHCCHHHHH
DIKAKAKAIFDRFNVSEGYQYTNSFLQSILDVMPNVTQTLLREHYRCHPKIINFCNQKFY
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCCEE
RGELIIMTTDKGEEDVLSVVKTVAGNHERNHYSQRQIDVIKNEIIPKYVSNPEETGIIAP
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCEECC
YKNQVEALSKEITDIDAATVHKFQGKEKENIIISTVDDEISDFADDPYLINVAVSRAKKK
CHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCEEEEHHHHHCCCE
LMLVVTGNVQSKEHNITDLIDYIQYNNFEVTESKIYSIFDYLYKQYTEERRVYLQKHKKV
EEEEEECCCCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEYDSENLMYSLIEDIISANKYSSLEVVCHFPLNMLIKNPELLNEQECQYAMNPATHLDF
HHCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCHHCCCHHHHHHCCCHHHHHH
LIYNRIGKKPVLAIEVDGYEYHKEDTIQASRDLLKNHIMELYEIPLLRFKTNGSGEREKI
HHHHHCCCCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHH
VEMLDKLV
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]